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The map label for this gene is ynjB [H]

Identifier: 226948381

GI number: 226948381

Start: 1320545

End: 1321783

Strand: Direct

Name: ynjB [H]

Synonym: CLM_1264

Alternate gene names: 226948381

Gene position: 1320545-1321783 (Clockwise)

Preceding gene: 226948380

Following gene: 226948382

Centisome position: 31.78

GC content: 29.22

Gene sequence:

>1239_bases
ATGAAAAAGTTTATAAGCATTATAGTTACTTTTGCAATGATTTTTTCTTTAGCAGCTTGTGGTAATAAAAAAGAAAACAA
AAATGAAGTAGATCTAAAGAATAAAGACTGGAATTCCATAGTAGAAAAGAGTAAAGGAACTACTGTAACATTTTACGGAT
GGGGTGGTAGTGAACTTACAAACAAATGGATAGATAACCATCTAGCAAAAGAATTAAAAGAAAAATATAATATAACATTA
AAAAGAGTACCAATGGATATTGATGACATATTAAATAAAATGCTTGGTGAAAAACAAGCAGGGAGTGATAAAGGAACCAT
AGATGTAGTTTGGATAAATGGAGAAAATTTTTATACAGCAAAGAAAAATAATCTTCTTTATGGACCTTTTTCAGAGAACC
TTCCTAATTATAAAAAATACATAGATAAGGATTCAAATGATGTAAAATACGACTTTGGAAAGCCAGTAGAGGCTTTTGAA
GCTCCTTATGGAAAAGCACAATTTGTTATGGTATATGATGAAGAAAAAGTAACAAAAGTACCAAAAGATCATAGAGAGCT
ATTAGAATTTGTGAAAGCTAATCCAGGCAAATTTACATATGCTGCACCACCAGATTTTACAGGAAGTGCTTTTGTAAGAA
ATATAATATATGATATAGTAGGTTACGAAAAACTTATGAAGATAAAGCCAGAAAAAGAATTAATAGAAAAAGAAATAAAA
CCAGCTATAGATTATTTAAAAGAAATAAAACCTTACCTTTGGAATAAAGGTAAAACTTATCCTGCTAATATAGCTATGCT
TGATAATATGTATGCAGACAAACAAGTTATAAATACTATGAGTTATAATCCAAACTCAGTAACAGAGAAAATAGATAATG
GAACTTTTCCTAAAAAAACACAAGTTTCATTATTTAAAAATGGAACTATAGGTAATACACATTTTGTAGCAATACCATTT
AATTCACCTAATAAAGAGGGGGCTATGGTTACTATTAATAGCATATTAAGTTTTGAAATGCAAAAATCTAAATATGATCC
TAAAGTATGGGGGGATCTGCCAGTATTTGATAATAAGAAATTAAGTGAAGAGGAAAAGGAAGAAATAGAAAAAATCAAAG
TAGGTTCTGGTTCACTTCCGCAAAGTGAATTATTACCACACAGACTACCAGAGTTGCCAGCAGAATTAGTACCAATTATA
GAAAAAATATGGCAGGAAAATATACCAGGAGATAAATAA

Upstream 100 bases:

>100_bases
GGATTTATAAACTTTAAATAGGTAAATTTATAGGGGAATAAGGCTAAATATGCTATAATGTGTATTGGTATATATAGTTA
TTTTTAAAAGGAGGATAAAA

Downstream 100 bases:

>100_bases
AGTGAAAGAAAAAATGAAACCTTATATATTATTATTGCCAGTTACAATAATAGTAGTTTCTATATTAGGAGTAGGAATAA
TAAATTGCCTAAGTCAAAGC

Product: putative ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKKFISIIVTFAMIFSLAACGNKKENKNEVDLKNKDWNSIVEKSKGTTVTFYGWGGSELTNKWIDNHLAKELKEKYNITL
KRVPMDIDDILNKMLGEKQAGSDKGTIDVVWINGENFYTAKKNNLLYGPFSENLPNYKKYIDKDSNDVKYDFGKPVEAFE
APYGKAQFVMVYDEEKVTKVPKDHRELLEFVKANPGKFTYAAPPDFTGSAFVRNIIYDIVGYEKLMKIKPEKELIEKEIK
PAIDYLKEIKPYLWNKGKTYPANIAMLDNMYADKQVINTMSYNPNSVTEKIDNGTFPKKTQVSLFKNGTIGNTHFVAIPF
NSPNKEGAMVTINSILSFEMQKSKYDPKVWGDLPVFDNKKLSEEEKEEIEKIKVGSGSLPQSELLPHRLPELPAELVPII
EKIWQENIPGDK

Sequences:

>Translated_412_residues
MKKFISIIVTFAMIFSLAACGNKKENKNEVDLKNKDWNSIVEKSKGTTVTFYGWGGSELTNKWIDNHLAKELKEKYNITL
KRVPMDIDDILNKMLGEKQAGSDKGTIDVVWINGENFYTAKKNNLLYGPFSENLPNYKKYIDKDSNDVKYDFGKPVEAFE
APYGKAQFVMVYDEEKVTKVPKDHRELLEFVKANPGKFTYAAPPDFTGSAFVRNIIYDIVGYEKLMKIKPEKELIEKEIK
PAIDYLKEIKPYLWNKGKTYPANIAMLDNMYADKQVINTMSYNPNSVTEKIDNGTFPKKTQVSLFKNGTIGNTHFVAIPF
NSPNKEGAMVTINSILSFEMQKSKYDPKVWGDLPVFDNKKLSEEEKEEIEKIKVGSGSLPQSELLPHRLPELPAELVPII
EKIWQENIPGDK
>Mature_412_residues
MKKFISIIVTFAMIFSLAACGNKKENKNEVDLKNKDWNSIVEKSKGTTVTFYGWGGSELTNKWIDNHLAKELKEKYNITL
KRVPMDIDDILNKMLGEKQAGSDKGTIDVVWINGENFYTAKKNNLLYGPFSENLPNYKKYIDKDSNDVKYDFGKPVEAFE
APYGKAQFVMVYDEEKVTKVPKDHRELLEFVKANPGKFTYAAPPDFTGSAFVRNIIYDIVGYEKLMKIKPEKELIEKEIK
PAIDYLKEIKPYLWNKGKTYPANIAMLDNMYADKQVINTMSYNPNSVTEKIDNGTFPKKTQVSLFKNGTIGNTHFVAIPF
NSPNKEGAMVTINSILSFEMQKSKYDPKVWGDLPVFDNKKLSEEEKEEIEKIKVGSGSLPQSELLPHRLPELPAELVPII
EKIWQENIPGDK

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=372, Percent_Identity=35.4838709677419, Blast_Score=224, Evalue=6e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47044; Mature: 47044

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFISIIVTFAMIFSLAACGNKKENKNEVDLKNKDWNSIVEKSKGTTVTFYGWGGSELT
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHH
NKWIDNHLAKELKEKYNITLKRVPMDIDDILNKMLGEKQAGSDKGTIDVVWINGENFYTA
HHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEE
KKNNLLYGPFSENLPNYKKYIDKDSNDVKYDFGKPVEAFEAPYGKAQFVMVYDEEKVTKV
CCCCEEECCHHCCCCHHHHHHCCCCCCEEECCCCCHHHHCCCCCCEEEEEEECCCHHHCC
PKDHRELLEFVKANPGKFTYAAPPDFTGSAFVRNIIYDIVGYEKLMKIKPEKELIEKEIK
CHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
PAIDYLKEIKPYLWNKGKTYPANIAMLDNMYADKQVINTMSYNPNSVTEKIDNGTFPKKT
HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
QVSLFKNGTIGNTHFVAIPFNSPNKEGAMVTINSILSFEMQKSKYDPKVWGDLPVFDNKK
EEEEEECCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LSEEEKEEIEKIKVGSGSLPQSELLPHRLPELPAELVPIIEKIWQENIPGDK
CCHHHHHHHHHEECCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKFISIIVTFAMIFSLAACGNKKENKNEVDLKNKDWNSIVEKSKGTTVTFYGWGGSELT
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCHHHH
NKWIDNHLAKELKEKYNITLKRVPMDIDDILNKMLGEKQAGSDKGTIDVVWINGENFYTA
HHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEE
KKNNLLYGPFSENLPNYKKYIDKDSNDVKYDFGKPVEAFEAPYGKAQFVMVYDEEKVTKV
CCCCEEECCHHCCCCHHHHHHCCCCCCEEECCCCCHHHHCCCCCCEEEEEEECCCHHHCC
PKDHRELLEFVKANPGKFTYAAPPDFTGSAFVRNIIYDIVGYEKLMKIKPEKELIEKEIK
CHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
PAIDYLKEIKPYLWNKGKTYPANIAMLDNMYADKQVINTMSYNPNSVTEKIDNGTFPKKT
HHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
QVSLFKNGTIGNTHFVAIPFNSPNKEGAMVTINSILSFEMQKSKYDPKVWGDLPVFDNKK
EEEEEECCCCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LSEEEKEEIEKIKVGSGSLPQSELLPHRLPELPAELVPIIEKIWQENIPGDK
CCHHHHHHHHHEECCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]