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The map label for this gene is yafE [C]

Identifier: 226948008

GI number: 226948008

Start: 930197

End: 930823

Strand: Reverse

Name: yafE [C]

Synonym: CLM_0869

Alternate gene names: 226948008

Gene position: 930823-930197 (Counterclockwise)

Preceding gene: 226948009

Following gene: 226948007

Centisome position: 22.4

GC content: 28.87

Gene sequence:

>627_bases
ATGAATTCTTTACAATATTTTGATTCTATAGCACCAGATTGGAATGTAATACGAAGTGAGTATTTTGAAGAAAGATTAAA
GTATAAAATTTTATCAATAACTAATATAAAAGATAAAATTGTAGGTGATTTAGGCTGTGGTACTGGCTTTGTTTCATTAG
CTGTGGCAAATGAAGCAAGTATAGTATTTTCTATAGATAATTCTATAAATATGCTTAAGGAATTATCAGCTTCTGCTTCA
AAAAAAGATTATAAAAATATATATCCTATAAAATCATCCCTTGATAATCTAGCAATATTTGATGAATCACTAAATGTAGT
ATTTATAAACATGGCACTTCACCATATAAAGAATGCGAAGAAAGCTATTGCAGAAATGTACAGAGTTCTTAAAAAAGATG
GAGTAGTTGTTATATCAGATGTTAGAGAGCACAATGGTGAATGGGCAAAGGAAGAAATGTTTGATGAATGGCTTGGATTT
TCAAAGGAACAAATGACAAACTGGTTAGAAGATGCTGGTTTTCAAAATATAGAAATAGAAAATACAAATTTAAGCTGCAA
AGGATATTCAAGTAAAGGTGAATACACTGAAACAGGTATATTTTTAGCTAGTGCAGTGAAATTATAA

Upstream 100 bases:

>100_bases
GGTAATGTATTTGTGATGAATCTATTATATTTCAACAGGTTGAGAAAAATTAATATTCATATAACTTAACAGAACTAAAT
TAATTTATAGGAGGATTATT

Downstream 100 bases:

>100_bases
TAAAATTTTAGATTGAAATAACTGAACAATAAAGTTATTTCAATCTAAAAAAACAAGCAAGAAATGTAATCACAGTTAAA
TTCTAAGGAGGAATAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator ArsR Family; ArsR Family Transcriptional Regulator; SAM-Dependent Methyltransferase; Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase Domain Protein; Transcriptional Regulator; Transcriptional Regulator ArsR Family/Methyltransferase; Pedicted SAM-Dependent Methyltransferase; UbiE/COQ5 Family Methlytransferase; Transcriptional Regulator Arsr Family; Ribosomal Methyltransferase; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Methyltransferase Domain Family; Methyltransferase Domain Family Protein

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNSLQYFDSIAPDWNVIRSEYFEERLKYKILSITNIKDKIVGDLGCGTGFVSLAVANEASIVFSIDNSINMLKELSASAS
KKDYKNIYPIKSSLDNLAIFDESLNVVFINMALHHIKNAKKAIAEMYRVLKKDGVVVISDVREHNGEWAKEEMFDEWLGF
SKEQMTNWLEDAGFQNIEIENTNLSCKGYSSKGEYTETGIFLASAVKL

Sequences:

>Translated_208_residues
MNSLQYFDSIAPDWNVIRSEYFEERLKYKILSITNIKDKIVGDLGCGTGFVSLAVANEASIVFSIDNSINMLKELSASAS
KKDYKNIYPIKSSLDNLAIFDESLNVVFINMALHHIKNAKKAIAEMYRVLKKDGVVVISDVREHNGEWAKEEMFDEWLGF
SKEQMTNWLEDAGFQNIEIENTNLSCKGYSSKGEYTETGIFLASAVKL
>Mature_208_residues
MNSLQYFDSIAPDWNVIRSEYFEERLKYKILSITNIKDKIVGDLGCGTGFVSLAVANEASIVFSIDNSINMLKELSASAS
KKDYKNIYPIKSSLDNLAIFDESLNVVFINMALHHIKNAKKAIAEMYRVLKKDGVVVISDVREHNGEWAKEEMFDEWLGF
SKEQMTNWLEDAGFQNIEIENTNLSCKGYSSKGEYTETGIFLASAVKL

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23519; Mature: 23519

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLQYFDSIAPDWNVIRSEYFEERLKYKILSITNIKDKIVGDLGCGTGFVSLAVANEAS
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCCCHHEEEEEECCCE
IVFSIDNSINMLKELSASASKKDYKNIYPIKSSLDNLAIFDESLNVVFINMALHHIKNAK
EEEEECCHHHHHHHHHHHCCHHHHHCCCCHHHCCCCEEEECCCCCEEEHHHHHHHHHHHH
KAIAEMYRVLKKDGVVVISDVREHNGEWAKEEMFDEWLGFSKEQMTNWLEDAGFQNIEIE
HHHHHHHHHHHHCCEEEEECCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEE
NTNLSCKGYSSKGEYTETGIFLASAVKL
CCCEEEECCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNSLQYFDSIAPDWNVIRSEYFEERLKYKILSITNIKDKIVGDLGCGTGFVSLAVANEAS
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCCCHHEEEEEECCCE
IVFSIDNSINMLKELSASASKKDYKNIYPIKSSLDNLAIFDESLNVVFINMALHHIKNAK
EEEEECCHHHHHHHHHHHCCHHHHHCCCCHHHCCCCEEEECCCCCEEEHHHHHHHHHHHH
KAIAEMYRVLKKDGVVVISDVREHNGEWAKEEMFDEWLGFSKEQMTNWLEDAGFQNIEIE
HHHHHHHHHHHHCCEEEEECCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEE
NTNLSCKGYSSKGEYTETGIFLASAVKL
CCCEEEECCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA