| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
Click here to switch to the map view.
The map label for this gene is 226947769
Identifier: 226947769
GI number: 226947769
Start: 669123
End: 670118
Strand: Direct
Name: 226947769
Synonym: CLM_0618
Alternate gene names: NA
Gene position: 669123-670118 (Clockwise)
Preceding gene: 226947768
Following gene: 226947770
Centisome position: 16.1
GC content: 25.5
Gene sequence:
>996_bases ATGAAACCTATTATTGTAATAATTGATTCTGGAATAAATAGAAGAATACTTGGTAACAATTCTTTTAATAAAAATTCTTT AAATCATAAAAATAAAGCTTTAAAAGATGAATTTGGTCATGGAACAGCTTGTGCTATGGTTATTAAATCTATCTGTCCAG ATGTGGAATTTATATCAATTCCCATATTAAATAAAGAAGGATTCTCAAACTCTGATAATTTAGAAAAAGCACTTACATAT TGTTTAGATATACATTGCCATATTATAAATTTAAGCTTGGCTATTTTAGATAATGAAGATAATAAAATAGAAGAATTATG TACAAAATTATCAAAACAAAATAAGGTTATTATTTCTTCAGTTAGAAATAATTTTATTGATAGTAAACCGGCTAAATATA GTTCTGTAATTGGAGTAAGAGGCGGTGGATTTTCTTCTATTGATAAGTATTGGTTCAACTCAAATTATGGAATACAATTA ATAACAGATATGACCCCTGTTTTTACCGACCCACAATTAAATAGACATTTCATTTTTTCAGGAAATAGTAAAGCTACTGC TGTTGCAACAGGACTTATTGCTAAAATTATTAATGAAAAAAAGCAAGTTAATATTGAAGATATTTTACTTACTCTTTCTA AAAATACAATTAAGAAAATATGGACTGAAAAAGATTTGGACATATCATTAGAAAAATTCACAAATTGTTCTAAATATAAC ATAGGTGAAATAAGCAAAACTTACTATGGAAAAATAATGTCAGCGCTTCAAATTGTCTGTAGAGATTATGGAATTGAAAT TCCTAATAATTTAGATAATGAAGATAACTTATTTAAAAGGGGAGTAATGTGTCCTGAAATAATTAGACCATTTTTTAAGC AGTTAGAAAAGGAATTTAAAATTCCAATAAACGAATCTAATATGAAACCGTATTTATTATTATCATTGAAAAGTATTTAT TACGCAATAAGGGGTGTACAAATTGAAACATATTAA
Upstream 100 bases:
>100_bases CTTAAAATATATAAATATTTTTATATTAATAAATACTCTTTTTATAGAATTAATTAGAATGAAATTCTATGAAATATATT ACATAAAAGGAGATATAAAA
Downstream 100 bases:
>100_bases AATGCTTTTATGTCTATGTAAATATACAAAAGGAATAAGAAAATATTATTTTGGAATTGGGATTTTTTTATTAGTTCAAA ATGTACAGTCATTATCAACT
Product: putative serine protease
Products: NA
Alternate protein names: Serine Protease
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKPIIVIIDSGINRRILGNNSFNKNSLNHKNKALKDEFGHGTACAMVIKSICPDVEFISIPILNKEGFSNSDNLEKALTY CLDIHCHIINLSLAILDNEDNKIEELCTKLSKQNKVIISSVRNNFIDSKPAKYSSVIGVRGGGFSSIDKYWFNSNYGIQL ITDMTPVFTDPQLNRHFIFSGNSKATAVATGLIAKIINEKKQVNIEDILLTLSKNTIKKIWTEKDLDISLEKFTNCSKYN IGEISKTYYGKIMSALQIVCRDYGIEIPNNLDNEDNLFKRGVMCPEIIRPFFKQLEKEFKIPINESNMKPYLLLSLKSIY YAIRGVQIETY
Sequences:
>Translated_331_residues MKPIIVIIDSGINRRILGNNSFNKNSLNHKNKALKDEFGHGTACAMVIKSICPDVEFISIPILNKEGFSNSDNLEKALTY CLDIHCHIINLSLAILDNEDNKIEELCTKLSKQNKVIISSVRNNFIDSKPAKYSSVIGVRGGGFSSIDKYWFNSNYGIQL ITDMTPVFTDPQLNRHFIFSGNSKATAVATGLIAKIINEKKQVNIEDILLTLSKNTIKKIWTEKDLDISLEKFTNCSKYN IGEISKTYYGKIMSALQIVCRDYGIEIPNNLDNEDNLFKRGVMCPEIIRPFFKQLEKEFKIPINESNMKPYLLLSLKSIY YAIRGVQIETY >Mature_331_residues MKPIIVIIDSGINRRILGNNSFNKNSLNHKNKALKDEFGHGTACAMVIKSICPDVEFISIPILNKEGFSNSDNLEKALTY CLDIHCHIINLSLAILDNEDNKIEELCTKLSKQNKVIISSVRNNFIDSKPAKYSSVIGVRGGGFSSIDKYWFNSNYGIQL ITDMTPVFTDPQLNRHFIFSGNSKATAVATGLIAKIINEKKQVNIEDILLTLSKNTIKKIWTEKDLDISLEKFTNCSKYN IGEISKTYYGKIMSALQIVCRDYGIEIPNNLDNEDNLFKRGVMCPEIIRPFFKQLEKEFKIPINESNMKPYLLLSLKSIY YAIRGVQIETY
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37541; Mature: 37541
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIIVIIDSGINRRILGNNSFNKNSLNHKNKALKDEFGHGTACAMVIKSICPDVEFISI CCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEE PILNKEGFSNSDNLEKALTYCLDIHCHIINLSLAILDNEDNKIEELCTKLSKQNKVIISS EEECCCCCCCCCHHHHHHHHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCEEHHH VRNNFIDSKPAKYSSVIGVRGGGFSSIDKYWFNSNYGIQLITDMTPVFTDPQLNRHFIFS HHHHCCCCCCCCHHHEEEECCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEE GNSKATAVATGLIAKIINEKKQVNIEDILLTLSKNTIKKIWTEKDLDISLEKFTNCSKYN CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCC IGEISKTYYGKIMSALQIVCRDYGIEIPNNLDNEDNLFKRGVMCPEIIRPFFKQLEKEFK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHC IPINESNMKPYLLLSLKSIYYAIRGVQIETY CCCCCCCCCCEEEHHHHHHHHHHHCCEEEEC >Mature Secondary Structure MKPIIVIIDSGINRRILGNNSFNKNSLNHKNKALKDEFGHGTACAMVIKSICPDVEFISI CCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEE PILNKEGFSNSDNLEKALTYCLDIHCHIINLSLAILDNEDNKIEELCTKLSKQNKVIISS EEECCCCCCCCCHHHHHHHHHHHHEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCEEHHH VRNNFIDSKPAKYSSVIGVRGGGFSSIDKYWFNSNYGIQLITDMTPVFTDPQLNRHFIFS HHHHCCCCCCCCHHHEEEECCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEE GNSKATAVATGLIAKIINEKKQVNIEDILLTLSKNTIKKIWTEKDLDISLEKFTNCSKYN CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCC IGEISKTYYGKIMSALQIVCRDYGIEIPNNLDNEDNLFKRGVMCPEIIRPFFKQLEKEFK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHC IPINESNMKPYLLLSLKSIYYAIRGVQIETY CCCCCCCCCCEEEHHHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA