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The map label for this gene is yfeT [C]

Identifier: 226947504

GI number: 226947504

Start: 325421

End: 326182

Strand: Direct

Name: yfeT [C]

Synonym: CLM_0338

Alternate gene names: 226947504

Gene position: 325421-326182 (Clockwise)

Preceding gene: 226947503

Following gene: 226947506

Centisome position: 7.83

GC content: 24.54

Gene sequence:

>762_bases
ATGAATTTAGATATTAGTAAGATTGTAGATAAATATCACTTAAGCAAGGTAGAAGAGAATATATTAATTTATATTATAAA
TAATATAGACCATGTTAAAGAAATAGGGGTAAGAGGAGTAGCAAAGGAACACTACACCTCTACTACCACTATTGTGAATT
TAGCAAAAAAAATAGGGTATTCTGGATTCTTAGATATGTATTATAATTTAAGTTTTACTTTGAAGGATAAGAGAAATTAT
TTTAATAGCGGAAAAAATAATAAATATTATGGAGTAGAATTAGAAGAACTTTTAGCACTAATAGAAGATAAAGATATAAG
TGATTTTATAGATTTATTAATAAAAAATAAAAATGAAGTTATATATACTAATGGGTTAGCATTTTCATATTTTATTGCAC
AATATTTTACTAGAAAACTTATAGTTCTTGGTTTTAGATGCATTTATTCTGAAGCATATGAAAGTTATGATGTAAATGCT
ATAAAAGCTAAATTACTAATAGCTGTTTCTAAATCAGGTGAAACAGATTTTATAATAAGGGCTTCTGAATCCGCTAAGAA
AAATGGGATAAAAATAGTTTCTTTTACAGGAGAAGCGGAAAATACATTAGCTAAAATGTCTGATATAAACTTTAAAATAT
ATGACATGCATACTATAGATGATCGTAATAAATTGTCTAATTCATTCTATCCTAATGCATTAATGTTATTTGAATTTTTA
ATAGGTAAATATTTGGAAAGAATCAAAGTTGATTCAGTTTAA

Upstream 100 bases:

>100_bases
TTACTTTTAATTATGTAAAATGTGAGATATAATATAATTGTACAATTTAAATAATAGTTATTAAATAAACAATAGAGTGG
TTATAGCAGAGGTGAATTTT

Downstream 100 bases:

>100_bases
TATCAAAAATTTAGTATTGGATTTCATCATAATGTTTTATTTCATTGGTATGTTTTCTAATCTTATTAAGGAGATAAGCT
TTGTATTTTTATGAAATTCA

Product: SIS domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator RpiR Family; Sugar Isomerase; SIS Domain Protein; Regulator; SIS Domain-Containing Protein

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNLDISKIVDKYHLSKVEENILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGYSGFLDMYYNLSFTLKDKRNY
FNSGKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNA
IKAKLLIAVSKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
IGKYLERIKVDSV

Sequences:

>Translated_253_residues
MNLDISKIVDKYHLSKVEENILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGYSGFLDMYYNLSFTLKDKRNY
FNSGKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNA
IKAKLLIAVSKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
IGKYLERIKVDSV
>Mature_253_residues
MNLDISKIVDKYHLSKVEENILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGYSGFLDMYYNLSFTLKDKRNY
FNSGKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEVIYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNA
IKAKLLIAVSKSGETDFIIRASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
IGKYLERIKVDSV

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29125; Mature: 29125

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDISKIVDKYHLSKVEENILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGY
CCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCHHHHHCHHHHHHHHHHHHCC
SGFLDMYYNLSFTLKDKRNYFNSGKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEV
CCEEEEEEEEEEEEECCHHHHCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCE
IYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNAIKAKLLIAVSKSGETDFIIR
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEEECCCCCEEEEE
ASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
ECCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCCHHHHHHHH
IGKYLERIKVDSV
HHHHHHHHCCCCC
>Mature Secondary Structure
MNLDISKIVDKYHLSKVEENILIYIINNIDHVKEIGVRGVAKEHYTSTTTIVNLAKKIGY
CCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCHHHHHCHHHHHHHHHHHHCC
SGFLDMYYNLSFTLKDKRNYFNSGKNNKYYGVELEELLALIEDKDISDFIDLLIKNKNEV
CCEEEEEEEEEEEEECCHHHHCCCCCCCEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCE
IYTNGLAFSYFIAQYFTRKLIVLGFRCIYSEAYESYDVNAIKAKLLIAVSKSGETDFIIR
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEEEEECCCCCEEEEE
ASESAKKNGIKIVSFTGEAENTLAKMSDINFKIYDMHTIDDRNKLSNSFYPNALMLFEFL
ECCCCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCHHHHCCCCCCCHHHHHHHH
IGKYLERIKVDSV
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA