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The map label for this gene is ydfS [H]

Identifier: 226947483

GI number: 226947483

Start: 303051

End: 303911

Strand: Reverse

Name: ydfS [H]

Synonym: CLM_0317

Alternate gene names: 226947483

Gene position: 303911-303051 (Counterclockwise)

Preceding gene: 226947484

Following gene: 226947482

Centisome position: 7.31

GC content: 30.2

Gene sequence:

>861_bases
ATGAATACTTGGTTAATAATATTATTTAACTCAATAATTTTATTTTTTTTAGCATTAGTTATAACAAAATATATGAAGAG
AAAGACCTTATCTAGGGCTACTCCCTTTGACTTTATTTCTTATGCCGTCATTGCTATTATAATTACTTTAATTTCTTTAA
ATATCGTTGATAATATTTACTTTGGACTAATTACATTGGCTGTTTGGGCGCTGATGCCTATTATCTTAGATTATGCTTCT
ATGAGAAGTAAGTGGGTTTATAACCTAATACATGGTAAGGAAAGAGTACTAGTTAAAAACGGCAAAATCATGGAAGATAA
CTTATCTAAAGAGAGAATTACAGGTCAAGAATTCCTACAAGAAATGCGTTCAAAAAAAGCATTTAACTTAGCCGATGTTG
AATTTGCTGTAATGGAAACAACTGGAGATATAAATGTTAGTTTAAAAGCTGATAAAAAACCTATTACCTCATATGATTTA
GGAAAACAAATAGGACCTAAAACTGAACCACAAACAGTTATTTTAGATGGAAATATATTAAATGAAGGTCTTACTAATGC
TGGATTAAATCGAGGCTGGCTTACAACTCAACTAGAAATCAAAGGGGTTGCCCTTGAAAATGTTTTTCTTGGTCAAGTAG
ATTCTTCTGGAGACTTATACGTAGATCTTTTTGATGATATGATACAAGTCCCTAAAACACAGGTTAAAGAAATGCTATAT
GCTAGCATTCAAAAAAGTGAAGCAGATCTTATGTCATTTTCTTTAGACTGTGACAATGAAGATGCAAAAACTATGTACTC
ACAAAGCGCTAAAAAATTAGAAAAAATTAGAAAAAAATTAGAACCATATTTATTGCGTTAG

Upstream 100 bases:

>100_bases
ATCCGAAGAAATAAGTAAAATTAAAACAGATTTAGAAAAAAGAATAGGAGTTATGGAGTTTGAGGAACCCCAATACAAAG
GCAACTAAATGAGGTGGTAT

Downstream 100 bases:

>100_bases
AAGGTGAAATAAGTGTCAAATATGAAAAAGAAAAAAATGACTACAGCTCAGCAGCAATATGATGCATTAGTAAATAGTAT
ACAACCTAAAAGACCTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MNTWLIILFNSIILFFLALVITKYMKRKTLSRATPFDFISYAVIAIIITLISLNIVDNIYFGLITLAVWALMPIILDYAS
MRSKWVYNLIHGKERVLVKNGKIMEDNLSKERITGQEFLQEMRSKKAFNLADVEFAVMETTGDINVSLKADKKPITSYDL
GKQIGPKTEPQTVILDGNILNEGLTNAGLNRGWLTTQLEIKGVALENVFLGQVDSSGDLYVDLFDDMIQVPKTQVKEMLY
ASIQKSEADLMSFSLDCDNEDAKTMYSQSAKKLEKIRKKLEPYLLR

Sequences:

>Translated_286_residues
MNTWLIILFNSIILFFLALVITKYMKRKTLSRATPFDFISYAVIAIIITLISLNIVDNIYFGLITLAVWALMPIILDYAS
MRSKWVYNLIHGKERVLVKNGKIMEDNLSKERITGQEFLQEMRSKKAFNLADVEFAVMETTGDINVSLKADKKPITSYDL
GKQIGPKTEPQTVILDGNILNEGLTNAGLNRGWLTTQLEIKGVALENVFLGQVDSSGDLYVDLFDDMIQVPKTQVKEMLY
ASIQKSEADLMSFSLDCDNEDAKTMYSQSAKKLEKIRKKLEPYLLR
>Mature_286_residues
MNTWLIILFNSIILFFLALVITKYMKRKTLSRATPFDFISYAVIAIIITLISLNIVDNIYFGLITLAVWALMPIILDYAS
MRSKWVYNLIHGKERVLVKNGKIMEDNLSKERITGQEFLQEMRSKKAFNLADVEFAVMETTGDINVSLKADKKPITSYDL
GKQIGPKTEPQTVILDGNILNEGLTNAGLNRGWLTTQLEIKGVALENVFLGQVDSSGDLYVDLFDDMIQVPKTQVKEMLY
ASIQKSEADLMSFSLDCDNEDAKTMYSQSAKKLEKIRKKLEPYLLR

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 32485; Mature: 32485

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTWLIILFNSIILFFLALVITKYMKRKTLSRATPFDFISYAVIAIIITLISLNIVDNIY
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FGLITLAVWALMPIILDYASMRSKWVYNLIHGKERVLVKNGKIMEDNLSKERITGQEFLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCHHHCCHHHHHH
EMRSKKAFNLADVEFAVMETTGDINVSLKADKKPITSYDLGKQIGPKTEPQTVILDGNIL
HHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEECCHH
NEGLTNAGLNRGWLTTQLEIKGVALENVFLGQVDSSGDLYVDLFDDMIQVPKTQVKEMLY
HCCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCCCEEEHHHHHHHHCCHHHHHHHHH
ASIQKSEADLMSFSLDCDNEDAKTMYSQSAKKLEKIRKKLEPYLLR
HHHHHCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHCCC
>Mature Secondary Structure
MNTWLIILFNSIILFFLALVITKYMKRKTLSRATPFDFISYAVIAIIITLISLNIVDNIY
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FGLITLAVWALMPIILDYASMRSKWVYNLIHGKERVLVKNGKIMEDNLSKERITGQEFLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCHHHCCHHHHHH
EMRSKKAFNLADVEFAVMETTGDINVSLKADKKPITSYDLGKQIGPKTEPQTVILDGNIL
HHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHCCCCCCCCEEEEECCHH
NEGLTNAGLNRGWLTTQLEIKGVALENVFLGQVDSSGDLYVDLFDDMIQVPKTQVKEMLY
HCCCCCCCCCCCEEEEEEEEEEEEECCEEEECCCCCCCEEEHHHHHHHHCCHHHHHHHHH
ASIQKSEADLMSFSLDCDNEDAKTMYSQSAKKLEKIRKKLEPYLLR
HHHHHCHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]