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The map label for this gene is yhfE [H]

Identifier: 226947434

GI number: 226947434

Start: 246622

End: 247656

Strand: Reverse

Name: yhfE [H]

Synonym: CLM_0263

Alternate gene names: 226947434

Gene position: 247656-246622 (Counterclockwise)

Preceding gene: 226947456

Following gene: 226947433

Centisome position: 5.96

GC content: 29.18

Gene sequence:

>1035_bases
ATGGATTATCATAAAAAACTTATATTAAATTATTTAAAAAATATATTAACTATTCCAAGTCCAACAGGCTTTACTAATCA
TATAACAAATTATCTAAAAAAAGAATTAGATACTATTGGTATAGAATATAAAATAACAAATAAAGGTTCCATAATAATTA
CTTTAGAAGGAGAAGATAAAAGCTTTGAGCGAACCTTGTCTGCTCATATGGATACCTTAGGTGCTATGGTTAAAGACATA
AATGATAACGGAACATTATCCATCGTTCCACTAGGTGGATTTATGATGAATTCTATTGAAGGTGAAAATTGTAGCATCCA
CACACTAAATGATGAAGTTTATTCAGGAACAATACAAACTATAAAACCTTCCGTTCATATTCATGGTAAAGAAGCTTATG
ATTTAAAGCGTTCTCCTGAAAACATGGAAGTAATATTAGATGAAAAAATATTTTCCAAAAAGGATATAGAAAATTTAAAC
ATAAACATAGGAGATTTTATTTCCTTTGATACAAGAAATATATTTACTGAAAATGGTTTTATAAAAAGCAGACATTTAGA
TGATAAAGCATCTCTAGCCATTCTTCTTTATGCTATAAAATATATTCATGTAAATAATCTGCCATTGTCTTGTACTACTA
ATTTCTTATTTAGTAACTATGAAGAAGTAGGTCATGGAGCTAGTTACATACCAAAAAATACAAAAGAATTTATTGCTGTA
GATATGGGTGCCCCTGGAGAAAATCAAAACTCCTCTGAATATAGTGTATGCATATGTGCAAAAGATTCTACAGGTCCCTA
TGATTTAGATTTCAGGAAAAAATTAATTAATATATGTAAAACTAGCAATATCCCTTATAAAATAGATATATATCCTTCTT
ACGGATCTGATGCAAGTGCTGCTTTAAAAGCAGGTTTTGATATAAAAGCTGCCTTAATAGGCCCTGGAGTATATGCCTCA
CATGCCTATGAAAGAACCCATATGGATTCAATACTGGCCACATTAGATCTAATAATAAAATACTGTGTATCTTAA

Upstream 100 bases:

>100_bases
TTCCTATAAATTAATAAGTTCTTTCTAATGAATATTTTAAAATACTAAATTTTAGTATATACTTGGAAGTAATAAAAGTA
TATTTTTAGGGAGTGTTTAT

Downstream 100 bases:

>100_bases
TGTTTAAAATCCACCTCCTTTAATTTTAAAAATTACACACTATTTAATTCAAAAATAATATATTAATATAAATTACTCTA
ATTTAATGTATTTTATTAAG

Product: glutamyl aminopeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MDYHKKLILNYLKNILTIPSPTGFTNHITNYLKKELDTIGIEYKITNKGSIIITLEGEDKSFERTLSAHMDTLGAMVKDI
NDNGTLSIVPLGGFMMNSIEGENCSIHTLNDEVYSGTIQTIKPSVHIHGKEAYDLKRSPENMEVILDEKIFSKKDIENLN
INIGDFISFDTRNIFTENGFIKSRHLDDKASLAILLYAIKYIHVNNLPLSCTTNFLFSNYEEVGHGASYIPKNTKEFIAV
DMGAPGENQNSSEYSVCICAKDSTGPYDLDFRKKLINICKTSNIPYKIDIYPSYGSDASAALKAGFDIKAALIGPGVYAS
HAYERTHMDSILATLDLIIKYCVS

Sequences:

>Translated_344_residues
MDYHKKLILNYLKNILTIPSPTGFTNHITNYLKKELDTIGIEYKITNKGSIIITLEGEDKSFERTLSAHMDTLGAMVKDI
NDNGTLSIVPLGGFMMNSIEGENCSIHTLNDEVYSGTIQTIKPSVHIHGKEAYDLKRSPENMEVILDEKIFSKKDIENLN
INIGDFISFDTRNIFTENGFIKSRHLDDKASLAILLYAIKYIHVNNLPLSCTTNFLFSNYEEVGHGASYIPKNTKEFIAV
DMGAPGENQNSSEYSVCICAKDSTGPYDLDFRKKLINICKTSNIPYKIDIYPSYGSDASAALKAGFDIKAALIGPGVYAS
HAYERTHMDSILATLDLIIKYCVS
>Mature_344_residues
MDYHKKLILNYLKNILTIPSPTGFTNHITNYLKKELDTIGIEYKITNKGSIIITLEGEDKSFERTLSAHMDTLGAMVKDI
NDNGTLSIVPLGGFMMNSIEGENCSIHTLNDEVYSGTIQTIKPSVHIHGKEAYDLKRSPENMEVILDEKIFSKKDIENLN
INIGDFISFDTRNIFTENGFIKSRHLDDKASLAILLYAIKYIHVNNLPLSCTTNFLFSNYEEVGHGASYIPKNTKEFIAV
DMGAPGENQNSSEYSVCICAKDSTGPYDLDFRKKLINICKTSNIPYKIDIYPSYGSDASAALKAGFDIKAALIGPGVYAS
HAYERTHMDSILATLDLIIKYCVS

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 38355; Mature: 38355

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYHKKLILNYLKNILTIPSPTGFTNHITNYLKKELDTIGIEYKITNKGSIIITLEGEDK
CCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCC
SFERTLSAHMDTLGAMVKDINDNGTLSIVPLGGFMMNSIEGENCSIHTLNDEVYSGTIQT
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCEEEEECCHHHCCCCEE
IKPSVHIHGKEAYDLKRSPENMEVILDEKIFSKKDIENLNINIGDFISFDTRNIFTENGF
ECCEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCEECCEEEECCCEEEECCCE
IKSRHLDDKASLAILLYAIKYIHVNNLPLSCTTNFLFSNYEEVGHGASYIPKNTKEFIAV
EEECCCCCHHHHHHHHHHHHHEEECCCCCEEEHHHHHHCHHHHCCCCCCCCCCCCEEEEE
DMGAPGENQNSSEYSVCICAKDSTGPYDLDFRKKLINICKTSNIPYKIDIYPSYGSDASA
ECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
ALKAGFDIKAALIGPGVYASHAYERTHMDSILATLDLIIKYCVS
HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDYHKKLILNYLKNILTIPSPTGFTNHITNYLKKELDTIGIEYKITNKGSIIITLEGEDK
CCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCC
SFERTLSAHMDTLGAMVKDINDNGTLSIVPLGGFMMNSIEGENCSIHTLNDEVYSGTIQT
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCEEEEECCHHHCCCCEE
IKPSVHIHGKEAYDLKRSPENMEVILDEKIFSKKDIENLNINIGDFISFDTRNIFTENGF
ECCEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCCEECCEEEECCCEEEECCCE
IKSRHLDDKASLAILLYAIKYIHVNNLPLSCTTNFLFSNYEEVGHGASYIPKNTKEFIAV
EEECCCCCHHHHHHHHHHHHHEEECCCCCEEEHHHHHHCHHHHCCCCCCCCCCCCEEEEE
DMGAPGENQNSSEYSVCICAKDSTGPYDLDFRKKLINICKTSNIPYKIDIYPSYGSDASA
ECCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
ALKAGFDIKAALIGPGVYASHAYERTHMDSILATLDLIIKYCVS
HHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]