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The map label for this gene is yqkD [H]

Identifier: 226947433

GI number: 226947433

Start: 245529

End: 246512

Strand: Reverse

Name: yqkD [H]

Synonym: CLM_0262

Alternate gene names: 226947433

Gene position: 246512-245529 (Counterclockwise)

Preceding gene: 226947434

Following gene: 226947432

Centisome position: 5.93

GC content: 26.42

Gene sequence:

>984_bases
ATGTATCACACAGCCAATATTAAAAATACCAAAACTAAAAAATATAAAATATTATTTTTAATACCTATATTAATAATTTT
AATAGCCATTAATGCAATAGGTTTTTATAATGGTAATTTAATATATGTTAGGGCATGCATAGAACCTACTAGTAGAAACA
GCACTAACATGTACGATACTTATAAATCAACTTTTGATGAAAGACGTTTCAATACATTAAAAAAAGAAAACATAACTATA
AACTCTAAATATGGTTATACTTTAAAAGGAACTTATATGGAAAACCCTCATAAGACTAAAAATTCTGTAGTTATAGTTCA
TGGTATCCGCTCCTCTCGTTGGGAATCAATGAAGTATGCAGATTTATACTTGGATAAAGGTTTTAATATTTTAATATATG
ATTCTAGATATCATGGTTTGAGCGGAGGTTCTGATGTAACCTATGGATATTATGAAAAATATGATTTAGATCAGTGCATT
GATTGGCTAGAAAGGAAAAATCCTGGTGGAATTATCGGTGCTCATGGAGAATCTTTAGGTGCATCCACAATATTACTTCA
CTCTAAAATGAATTTATCTAAAAATAGAGTAAAATTTTATGTAGCAGATTGTCCCTATTCTAATTTAGAAGAACTTTTAA
AAAATAAGTTAGATGAAGAACTACACATTAATAATAAAATCATTACTGATTCATTATTATTCTATTCTGGTGCTTGTGCT
CTTTTAAAATCAAAGTTTCTCTATAGCAGTGTTTCTCCTATAGATTCTATAAAAACTGTACAAACACCTATAATGTTTAT
ACATGGTGATAAAGATATTTATATACCTAAAAAAATGAGTGAAGAAATGTATAATATAAAACCAGGAATAAAAGAAATAT
ATATTGCCCCTAATGCAGGTCATGCTCAAGCCTATTTATATAACAAGAAAGAATACAGAAAAAATTTATATAAATTTATA
GATAAATATGTAAAAATTAACTAA

Upstream 100 bases:

>100_bases
TCCACCTCCTTTAATTTTAAAAATTACACACTATTTAATTCAAAAATAATATATTAATATAAATTACTCTAATTTAATGT
ATTTTATTAAGGGGGAAAAT

Downstream 100 bases:

>100_bases
ACTATTTAAGGAAGGTGCTAAAATCATGAAAGCAGAAATACTTTGTGTAGGAACAGAATTATTATTAGGGGATATTGTAA
ACACAAATGCCCAGTATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MYHTANIKNTKTKKYKILFLIPILIILIAINAIGFYNGNLIYVRACIEPTSRNSTNMYDTYKSTFDERRFNTLKKENITI
NSKYGYTLKGTYMENPHKTKNSVVIVHGIRSSRWESMKYADLYLDKGFNILIYDSRYHGLSGGSDVTYGYYEKYDLDQCI
DWLERKNPGGIIGAHGESLGASTILLHSKMNLSKNRVKFYVADCPYSNLEELLKNKLDEELHINNKIITDSLLFYSGACA
LLKSKFLYSSVSPIDSIKTVQTPIMFIHGDKDIYIPKKMSEEMYNIKPGIKEIYIAPNAGHAQAYLYNKKEYRKNLYKFI
DKYVKIN

Sequences:

>Translated_327_residues
MYHTANIKNTKTKKYKILFLIPILIILIAINAIGFYNGNLIYVRACIEPTSRNSTNMYDTYKSTFDERRFNTLKKENITI
NSKYGYTLKGTYMENPHKTKNSVVIVHGIRSSRWESMKYADLYLDKGFNILIYDSRYHGLSGGSDVTYGYYEKYDLDQCI
DWLERKNPGGIIGAHGESLGASTILLHSKMNLSKNRVKFYVADCPYSNLEELLKNKLDEELHINNKIITDSLLFYSGACA
LLKSKFLYSSVSPIDSIKTVQTPIMFIHGDKDIYIPKKMSEEMYNIKPGIKEIYIAPNAGHAQAYLYNKKEYRKNLYKFI
DKYVKIN
>Mature_327_residues
MYHTANIKNTKTKKYKILFLIPILIILIAINAIGFYNGNLIYVRACIEPTSRNSTNMYDTYKSTFDERRFNTLKKENITI
NSKYGYTLKGTYMENPHKTKNSVVIVHGIRSSRWESMKYADLYLDKGFNILIYDSRYHGLSGGSDVTYGYYEKYDLDQCI
DWLERKNPGGIIGAHGESLGASTILLHSKMNLSKNRVKFYVADCPYSNLEELLKNKLDEELHINNKIITDSLLFYSGACA
LLKSKFLYSSVSPIDSIKTVQTPIMFIHGDKDIYIPKKMSEEMYNIKPGIKEIYIAPNAGHAQAYLYNKKEYRKNLYKFI
DKYVKIN

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 37817; Mature: 37817

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHTANIKNTKTKKYKILFLIPILIILIAINAIGFYNGNLIYVRACIEPTSRNSTNMYDT
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCCCCCHHH
YKSTFDERRFNTLKKENITINSKYGYTLKGTYMENPHKTKNSVVIVHGIRSSRWESMKYA
HHHHHHHHHHHHHHHCCEEEECCCCEEEEECEECCCCCCCCCEEEEECCCCCCCCCCEEE
DLYLDKGFNILIYDSRYHGLSGGSDVTYGYYEKYDLDQCIDWLERKNPGGIIGAHGESLG
EEEECCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCC
ASTILLHSKMNLSKNRVKFYVADCPYSNLEELLKNKLDEELHINNKIITDSLLFYSGACA
CEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEECCCEEEHHHHHHHHHHHH
LLKSKFLYSSVSPIDSIKTVQTPIMFIHGDKDIYIPKKMSEEMYNIKPGIKEIYIAPNAG
HHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCEECCHHHHHHHHHCCCCCEEEEECCCCC
HAQAYLYNKKEYRKNLYKFIDKYVKIN
CCEEEEECHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MYHTANIKNTKTKKYKILFLIPILIILIAINAIGFYNGNLIYVRACIEPTSRNSTNMYDT
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCCCCCCCHHH
YKSTFDERRFNTLKKENITINSKYGYTLKGTYMENPHKTKNSVVIVHGIRSSRWESMKYA
HHHHHHHHHHHHHHHCCEEEECCCCEEEEECEECCCCCCCCCEEEEECCCCCCCCCCEEE
DLYLDKGFNILIYDSRYHGLSGGSDVTYGYYEKYDLDQCIDWLERKNPGGIIGAHGESLG
EEEECCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCC
ASTILLHSKMNLSKNRVKFYVADCPYSNLEELLKNKLDEELHINNKIITDSLLFYSGACA
CEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEECCCEEEHHHHHHHHHHHH
LLKSKFLYSSVSPIDSIKTVQTPIMFIHGDKDIYIPKKMSEEMYNIKPGIKEIYIAPNAG
HHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCEECCHHHHHHHHHCCCCCEEEEECCCCC
HAQAYLYNKKEYRKNLYKFIDKYVKIN
CCEEEEECHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]