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The map label for this gene is ywaD [H]

Identifier: 226947397

GI number: 226947397

Start: 205861

End: 207225

Strand: Reverse

Name: ywaD [H]

Synonym: CLM_0223

Alternate gene names: 226947397

Gene position: 207225-205861 (Counterclockwise)

Preceding gene: 226947405

Following gene: 226947389

Centisome position: 4.99

GC content: 23.88

Gene sequence:

>1365_bases
ATGAGAAATTTTGCCAAGCTATTTTATATAACTATTATTTTAACCCTTTTATGTTTTAGTATACAAACTACCTTATTTAT
AAAATCATTTAATATAAACTCTGTACTCAACAATATTAATTTAATATCCTCTAATGAATTTAAGGGAAGACTTCCTGGTT
CTATAGAAAATAGACAAGTTTCAGAATATATAAGAGATAATTTTAAAAGTAATAATCTACTTCCCTTTGAAGAAAACTAT
TTTCATAGTTTTGGTTGTTTTTATCCTAGTAAGATTGAAGGTAATCCTTACTTGAAAGTAATAGATTCTCAAGGTAATTT
AGTTAAAAATTATTCCTATGGTAAGGATTTTAAAGAAGATATGCTTAATTTTAGAGAAAATGCTTTTTCCTTTTCTAATG
AAAATGTAATTATTCAAAATGATTTTATGAATATAAATTATAATAATGGTAATTTCCTTATATATTCTACAAATGATTAT
GGTTCTAATTTTAGAAGTTCTTTTGTAAAAGAAGCTCCTTATAATATGTATGTAGTTACAAACAAAAAAGTTTTTTCTGA
AATAAAAGATTTTATAAAATCAGGCCATAAGATAATTTGCTTTATTCCTTATTCTATAAAAGAAACTGAGCTTAATAACG
TTGTAGGATATATAAAAGGAATAAATCCTAACAATGATCCTATTATAATTTCTTCTCATTTTGATCATTTAGGCGAGGAT
TTAAATGGGACTATATATAGTGGTGCTTTAGATAATGCCTCTGGTACTAGCTTCATGCTAGAATTAGTTAAATATATTAA
ATCCTTAGGCACACCTAATAGGGATATTATATTTGTTTCTTTTAATGCAGAAGAATTTGGGTGTCTTGGATCTAAGGCTT
TTGTAGATAAATATTACAGTAAAATAAAAAATTCTACATTATTAAATTTTGATATGATAGGAGGTAGTGAAAGCGTTCCT
CTTTGCATAATGGGATCTGACAAAGATACCGCGAATACTCCTCTCATAAAAGAATTATCTGTCTTATGCTCTTTTAAAAA
TATTAATTTTAATTATATGTTTGAAAATGCTAGTGATCATTATTTCTTTAGAGAAAAGGGAATAAATGCTATAACATTTT
GTGATAATGATACTTCCAAAATTCATACTCCTAAAGATAAAATAGAGTTTATAAATAAAAATTCTATAAAAAGATGCTAC
AATGTAGCATCATTAAAAATTATAAACTCCGCTTTTAGTGGAAATTTATTTTATATATACTATAAAGAAATTCTGATTAT
ATCTTTTATATTACTTTTTGTATTTATAAAAAGACAACAAAGAAACAAAACAAAAATTATAAATTTAAATAAGTATTTAT
TATAA

Upstream 100 bases:

>100_bases
TCCAAATATTAAATAAAGTCACTAAAAATATATTATACCAGTTATATATCCTTTGGCAAATTAATATAAATTAAATTATA
AACAATTTATAGGAGATATT

Downstream 100 bases:

>100_bases
ACAGAGTTCTTGTCTTTAGAGGGAGTTTTTACTCCCACTAAAGCTTAGAAATCGTTATCCAGAGACGTATCCGCTCTTTA
CTCCCACTTTGAAGAAAAGC

Product: peptidase family protein

Products: NA

Alternate protein names: Arginyl aminopeptidase; BSAP; Leucyl aminopeptidase [H]

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQVSEYIRDNFKSNNLLPFEENY
FHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKEDMLNFRENAFSFSNENVIIQNDFMNINYNNGNFLIYSTNDY
GSNFRSSFVKEAPYNMYVVTNKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED
LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYSKIKNSTLLNFDMIGGSESVP
LCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDHYFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCY
NVASLKIINSAFSGNLFYIYYKEILIISFILLFVFIKRQQRNKTKIINLNKYLL

Sequences:

>Translated_454_residues
MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQVSEYIRDNFKSNNLLPFEENY
FHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKEDMLNFRENAFSFSNENVIIQNDFMNINYNNGNFLIYSTNDY
GSNFRSSFVKEAPYNMYVVTNKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED
LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYSKIKNSTLLNFDMIGGSESVP
LCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDHYFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCY
NVASLKIINSAFSGNLFYIYYKEILIISFILLFVFIKRQQRNKTKIINLNKYLL
>Mature_454_residues
MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQVSEYIRDNFKSNNLLPFEENY
FHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKEDMLNFRENAFSFSNENVIIQNDFMNINYNNGNFLIYSTNDY
GSNFRSSFVKEAPYNMYVVTNKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED
LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYSKIKNSTLLNFDMIGGSESVP
LCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDHYFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCY
NVASLKIINSAFSGNLFYIYYKEILIISFILLFVFIKRQQRNKTKIINLNKYLL

Specific function: Catalyzes the hydrolysis of a range of N-terminal amino acids [H]

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M28 family. M28B subfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI71984813, Length=120, Percent_Identity=30.8333333333333, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007484
- InterPro:   IPR003137 [H]

Pfam domain/function: PF02225 PA; PF04389 Peptidase_M28 [H]

EC number: =3.4.11.6; =3.4.11.10 [H]

Molecular weight: Translated: 52270; Mature: 52270

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQV
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCEEEECCCCCCCCCCCCCCHHH
SEYIRDNFKSNNLLPFEENYFHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKED
HHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHH
MLNFRENAFSFSNENVIIQNDFMNINYNNGNFLIYSTNDYGSNFRSSFVKEAPYNMYVVT
HHHHHHHHCCCCCCCEEEEECEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEE
NKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED
CHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCEEEEEECCCCCCCEEEEECCHHHCCCC
LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYS
CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHH
KIKNSTLLNFDMIGGSESVPLCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDH
HHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCCC
YFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCYNVASLKIINSAFSGNLFYIY
EEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHEEEHHHCCCCEEEEH
YKEILIISFILLFVFIKRQQRNKTKIINLNKYLL
HHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCC
>Mature Secondary Structure
MRNFAKLFYITIILTLLCFSIQTTLFIKSFNINSVLNNINLISSNEFKGRLPGSIENRQV
CCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCEEEECCCCCCCCCCCCCCHHH
SEYIRDNFKSNNLLPFEENYFHSFGCFYPSKIEGNPYLKVIDSQGNLVKNYSYGKDFKED
HHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCHHHH
MLNFRENAFSFSNENVIIQNDFMNINYNNGNFLIYSTNDYGSNFRSSFVKEAPYNMYVVT
HHHHHHHHCCCCCCCEEEEECEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEE
NKKVFSEIKDFIKSGHKIICFIPYSIKETELNNVVGYIKGINPNNDPIIISSHFDHLGED
CHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCEEEEEECCCCCCCEEEEECCHHHCCCC
LNGTIYSGALDNASGTSFMLELVKYIKSLGTPNRDIIFVSFNAEEFGCLGSKAFVDKYYS
CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHH
KIKNSTLLNFDMIGGSESVPLCIMGSDKDTANTPLIKELSVLCSFKNINFNYMFENASDH
HHCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHEEEECCCEEEEECCCCCC
YFFREKGINAITFCDNDTSKIHTPKDKIEFINKNSIKRCYNVASLKIINSAFSGNLFYIY
EEEECCCCCEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHEEEHHHCCCCEEEEH
YKEILIISFILLFVFIKRQQRNKTKIINLNKYLL
HHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377; 1806041 [H]