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The map label for this gene is 226947352

Identifier: 226947352

GI number: 226947352

Start: 161276

End: 162256

Strand: Direct

Name: 226947352

Synonym: CLM_0172

Alternate gene names: NA

Gene position: 161276-162256 (Clockwise)

Preceding gene: 226947351

Following gene: 226947353

Centisome position: 3.88

GC content: 29.77

Gene sequence:

>981_bases
ATGACAAGAGCTTTAGCTATGATATCAGGTGGCTTAGATAGTACATTAGCTGCTAAACTTATAAAAGATCAAGGTATAGA
AGTAATAGGAATATGCTTCAGATCATATTTTTTTAATGAAAAAAATGCAGAGAGAATGACTAAACAGATTGATATACCTT
TAGAAGTAGTGGATTTTTCAAAGGAACATTTAGATATGGTTAAAAACCCCAAACATGGGTATGGGAAAAATATGAATCCA
TGTATTGATTGTCATGCTATGATGATGAAGTATTCAGGAGAACTTTTAAAAAAATTTAATGCAGACTTCATAATAACAGG
AGAGGTTTTAAATCAGAGACCTATGTCGCAAAATAAGGCAGCTTTAAATGTAGTAAAAAAAGAATCAGGATATGAAGAAA
AAATATTAAGACCGTTGTGTGCTAAGATTTTACCACCTACAGAAATGGAATTACAAAATCTTGTAGACAGAGAAAAACTT
TTAAATATATCTGGTAGAAGTAGAAAGGTTCAAATGGAATTAGCAGAAAAATGGGGTATAAAAGAGTACCCTTCACCAGC
TGGGGGTTGTAAACTTACAGAGCCTAATTATGCAAAAAGATTAAAGGATTTACTAAAACATAAAGAAACTCCTGAAGTAA
GGGAGCTTGAATTATTAAAATATGGAAGACACTTTAGAGCATCAGAGGATTGTAAAATAATATCTACTAGAACTAAAGAA
GAAGGGGATATTATTAAGAATTATTTAGATTCAAAAGACTATATGTTTTTAGCTTGTGACTATAATGGTTCTACTGTGAT
AATAATAGGAGAACCTAATAAAGATGATATAAAATTAGCAGCTGAAATAACAGGACGATATAGCAAAGGCAAGGATGAAG
ATGAGATAAAAGTTAAGTATGGTAAAGTCAATACTGATTTAAATAATACAATAAAAGTAAAGCCAGCTTCTGATGATTAT
TTAAAAAAATTTATAATATAA

Upstream 100 bases:

>100_bases
TAATTTAAAATAAAGAGTGAATAATAGTGTATTCACTCTTTATTTGTATTATAATAATAGTTATTGAAAAGTAAGTAATA
TGAAAAGAAGGGTGAGTTTA

Downstream 100 bases:

>100_bases
ATATAAGGAAAAGGAATGTAAGTTATGAAGAAGAAAGCACTTATTCATGTTTTAAGTTCCATACCGGATGTAAAAGAAAA
AGATGATTCAATAGAAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: TRNA-Methyltransferase; Thiamine Biosynthesis ProteinExsB; tRNA Methyltransferase; Argininosuccinate Synthase; Queuosine Synthesis; tRNA -Methyltransferase; tRNA Methyl Transferase; Arginino Succinate Synthase; Thiamine Biosynthesis Protein-Like Protein; TRNA(5-Methylaminomethyl-2-Thiouridylate) Methyltransferase; tRNA Methyl Transferase-Like Protein; ThiI Family Protein

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFSKEHLDMVKNPKHGYGKNMNP
CIDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKAALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKL
LNISGRSRKVQMELAEKWGIKEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRASEDCKIISTRTKE
EGDIIKNYLDSKDYMFLACDYNGSTVIIIGEPNKDDIKLAAEITGRYSKGKDEDEIKVKYGKVNTDLNNTIKVKPASDDY
LKKFII

Sequences:

>Translated_326_residues
MTRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFSKEHLDMVKNPKHGYGKNMNP
CIDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKAALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKL
LNISGRSRKVQMELAEKWGIKEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRASEDCKIISTRTKE
EGDIIKNYLDSKDYMFLACDYNGSTVIIIGEPNKDDIKLAAEITGRYSKGKDEDEIKVKYGKVNTDLNNTIKVKPASDDY
LKKFII
>Mature_325_residues
TRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFSKEHLDMVKNPKHGYGKNMNPC
IDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKAALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKLL
NISGRSRKVQMELAEKWGIKEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRASEDCKIISTRTKEE
GDIIKNYLDSKDYMFLACDYNGSTVIIIGEPNKDDIKLAAEITGRYSKGKDEDEIKVKYGKVNTDLNNTIKVKPASDDYL
KKFII

Specific function: Unknown

COG id: COG0482

COG function: function code J; Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37158; Mature: 37026

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFS
CCCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCC
KEHLDMVKNPKHGYGKNMNPCIDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCHH
ALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKLLNISGRSRKVQMELAEKWGI
HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC
KEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRASEDCKIISTRTKE
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCC
EGDIIKNYLDSKDYMFLACDYNGSTVIIIGEPNKDDIKLAAEITGRYSKGKDEDEIKVKY
CHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEE
GKVNTDLNNTIKVKPASDDYLKKFII
EEEECCCCCEEEEEECCHHHHHHHCC
>Mature Secondary Structure 
TRALAMISGGLDSTLAAKLIKDQGIEVIGICFRSYFFNEKNAERMTKQIDIPLEVVDFS
CCHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEECCC
KEHLDMVKNPKHGYGKNMNPCIDCHAMMMKYSGELLKKFNADFIITGEVLNQRPMSQNKA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCCCCHH
ALNVVKKESGYEEKILRPLCAKILPPTEMELQNLVDREKLLNISGRSRKVQMELAEKWGI
HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCC
KEYPSPAGGCKLTEPNYAKRLKDLLKHKETPEVRELELLKYGRHFRASEDCKIISTRTKE
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCC
EGDIIKNYLDSKDYMFLACDYNGSTVIIIGEPNKDDIKLAAEITGRYSKGKDEDEIKVKY
CHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCEEEEE
GKVNTDLNNTIKVKPASDDYLKKFII
EEEECCCCCEEEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA