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The map label for this gene is 226947235

Identifier: 226947235

GI number: 226947235

Start: 20402

End: 21799

Strand: Direct

Name: 226947235

Synonym: CLM_0020

Alternate gene names: NA

Gene position: 20402-21799 (Clockwise)

Preceding gene: 226947234

Following gene: 226947236

Centisome position: 0.49

GC content: 25.18

Gene sequence:

>1398_bases
ATGGATTATGATGTGATGATATTAGGTGGGGGAATAATCGGATGTGCATTAGCTTATGAATTATCAAAATATAGTTTAAA
TATAGCTTTAATAGAAAAGGATTATGATATAGCAGATGATGTAGCATTTATAAATTCATCTGTAGTGTATGATGGAGTGG
AATGTGAAGATGATTTAGCAGCTAATTTGGAGTTAAATGGTAATAAATTAATGGAAGATATAGCTAAAAAATTTAAAATT
CCATTTAAAAAGACAGGGTCATTAATAATAGCTCAAAATGATAATGAAGTATACAATATAGAAAATATGTATAAAAAAGC
TTTAAAAAGAGGAATAAAAAATATAGAAGTATTAACTAAGGATGAGGTAGAAAAAATAGAACCAAATTTAAATATAGATT
TTAAAAAGGCATTATATTCTAGCAATACAGCATCTATAGCACCTTTTGATCTAGCTATATCTTATGGAGAAATTGCCTTT
GATAATGGGGTAAATTTTAAATTAGAAGAACAGGTTTTAGAAATACAAAAATTATCTAAGGGATATAAAATTATAACTAA
TAAAAACAAATTTAACTGTAATATAGTTATAAATACAACCCCTGATGAAAATTTTGGAATATATTCAGACACCAAAAGAA
ATTATAAAAAAAGTAATTTAAATTATTTATTAATAGAAAAAAATTCAATTAAGGAATTTAATAATATAGTAGTAAAGCTA
GGTAATAATGAAAATATAAAAAAAATTTTAGCTGTACCAACTGTTCAAGGTAGTATGGTTTTAGCTGTAGATACTTATGA
GAAGATAAATTATAAAAATACATTAGATGTGTCTGCTTTGATTTTAGATGAAATAAATGAGATGGATATAAATAATTTTT
ATCAATTCCCATATTATGATGATAGCATAGTAATAGATGATAGTTTAATAGATAAGGGATATATAAAAGTTATAGTCAAT
CATTATGGACAAGTAACGATGACACCTTATATAGCAAAGATTGTTACAGAAACTATAGTTAGTAATATAAAATGTGTACT
AAAGAAAGAGTTTATAGATAAAAGAAGGGATTATTATAAATTTAATGAGTTGTCTTTAGAAGAAAGAAATAAAATTATAA
ATATGGACAAAAGGTATGGAAAAATAATATGTGCCTGCAATAAAGTAACAGAAGGAGAAATTATAGATGCAATAAGAAGG
CCTTTAGGTGCACGAACATTAGAGGGAATAAAAAGAAGGACAGGAGCAGCTTTTGGTAGTTGTCAGGGAGCCTATTGTTT
AAATAAAGTTGTATCGATATTAGCTAGAGAAACAAATAAATTTATGACAGATATAGTTAAGGACTCAAAAAATTCTAAAA
TTATACCCTGTAGAATTAAAGAATTTGATACAATTTAA

Upstream 100 bases:

>100_bases
AAGAGTACCTATGGAGGATTCAAAGTGGTTATATAGAAATATACCTAATAAATCTTTAATAATTATACATTATTAAAGTG
GAGAGAAAGGCTGATAAAAA

Downstream 100 bases:

>100_bases
TTTAGGAGGAATAAAGGTGCTTAGAGAATTTATTTGTAATGGATGCAATAAAAAATGTATAATATCTCTTTATAATAGTA
ATTATAATACTATAAAAGGT

Product: FAD-dependent family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MDYDVMILGGGIIGCALAYELSKYSLNIALIEKDYDIADDVAFINSSVVYDGVECEDDLAANLELNGNKLMEDIAKKFKI
PFKKTGSLIIAQNDNEVYNIENMYKKALKRGIKNIEVLTKDEVEKIEPNLNIDFKKALYSSNTASIAPFDLAISYGEIAF
DNGVNFKLEEQVLEIQKLSKGYKIITNKNKFNCNIVINTTPDENFGIYSDTKRNYKKSNLNYLLIEKNSIKEFNNIVVKL
GNNENIKKILAVPTVQGSMVLAVDTYEKINYKNTLDVSALILDEINEMDINNFYQFPYYDDSIVIDDSLIDKGYIKVIVN
HYGQVTMTPYIAKIVTETIVSNIKCVLKKEFIDKRRDYYKFNELSLEERNKIINMDKRYGKIICACNKVTEGEIIDAIRR
PLGARTLEGIKRRTGAAFGSCQGAYCLNKVVSILARETNKFMTDIVKDSKNSKIIPCRIKEFDTI

Sequences:

>Translated_465_residues
MDYDVMILGGGIIGCALAYELSKYSLNIALIEKDYDIADDVAFINSSVVYDGVECEDDLAANLELNGNKLMEDIAKKFKI
PFKKTGSLIIAQNDNEVYNIENMYKKALKRGIKNIEVLTKDEVEKIEPNLNIDFKKALYSSNTASIAPFDLAISYGEIAF
DNGVNFKLEEQVLEIQKLSKGYKIITNKNKFNCNIVINTTPDENFGIYSDTKRNYKKSNLNYLLIEKNSIKEFNNIVVKL
GNNENIKKILAVPTVQGSMVLAVDTYEKINYKNTLDVSALILDEINEMDINNFYQFPYYDDSIVIDDSLIDKGYIKVIVN
HYGQVTMTPYIAKIVTETIVSNIKCVLKKEFIDKRRDYYKFNELSLEERNKIINMDKRYGKIICACNKVTEGEIIDAIRR
PLGARTLEGIKRRTGAAFGSCQGAYCLNKVVSILARETNKFMTDIVKDSKNSKIIPCRIKEFDTI
>Mature_465_residues
MDYDVMILGGGIIGCALAYELSKYSLNIALIEKDYDIADDVAFINSSVVYDGVECEDDLAANLELNGNKLMEDIAKKFKI
PFKKTGSLIIAQNDNEVYNIENMYKKALKRGIKNIEVLTKDEVEKIEPNLNIDFKKALYSSNTASIAPFDLAISYGEIAF
DNGVNFKLEEQVLEIQKLSKGYKIITNKNKFNCNIVINTTPDENFGIYSDTKRNYKKSNLNYLLIEKNSIKEFNNIVVKL
GNNENIKKILAVPTVQGSMVLAVDTYEKINYKNTLDVSALILDEINEMDINNFYQFPYYDDSIVIDDSLIDKGYIKVIVN
HYGQVTMTPYIAKIVTETIVSNIKCVLKKEFIDKRRDYYKFNELSLEERNKIINMDKRYGKIICACNKVTEGEIIDAIRR
PLGARTLEGIKRRTGAAFGSCQGAYCLNKVVSILARETNKFMTDIVKDSKNSKIIPCRIKEFDTI

Specific function: Unknown

COG id: COG0579

COG function: function code R; Predicted dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17565764, Length=145, Percent_Identity=35.8620689655172, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 52848; Mature: 52848

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYDVMILGGGIIGCALAYELSKYSLNIALIEKDYDIADDVAFINSSVVYDGVECEDDLA
CCEEEEEECCCHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHCCCEEECCCCCCCCCE
ANLELNGNKLMEDIAKKFKIPFKKTGSLIIAQNDNEVYNIENMYKKALKRGIKNIEVLTK
EEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECHHHHHHHHHHHCCCCEEEEEH
DEVEKIEPNLNIDFKKALYSSNTASIAPFDLAISYGEIAFDNGVNFKLEEQVLEIQKLSK
HHHHHCCCCCCEEHHHHHHCCCCCCCCCEEEEEEECCEEECCCCCEEHHHHHHHHHHHCC
GYKIITNKNKFNCNIVINTTPDENFGIYSDTKRNYKKSNLNYLLIEKNSIKEFNNIVVKL
CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECCCHHCCCCEEEEE
GNNENIKKILAVPTVQGSMVLAVDTYEKINYKNTLDVSALILDEINEMDINNFYQFPYYD
CCCCCCEEEEEECCCCCCEEEEEECHHHCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCC
DSIVIDDSLIDKGYIKVIVNHYGQVTMTPYIAKIVTETIVSNIKCVLKKEFIDKRRDYYK
CCEEEEHHHCCCCHHEEHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
FNELSLEERNKIINMDKRYGKIICACNKVTEGEIIDAIRRPLGARTLEGIKRRTGAAFGS
CCCCCHHHHHCEECCCHHCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
CQGAYCLNKVVSILARETNKFMTDIVKDSKNSKIIPCRIKEFDTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MDYDVMILGGGIIGCALAYELSKYSLNIALIEKDYDIADDVAFINSSVVYDGVECEDDLA
CCEEEEEECCCHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHCCCEEECCCCCCCCCE
ANLELNGNKLMEDIAKKFKIPFKKTGSLIIAQNDNEVYNIENMYKKALKRGIKNIEVLTK
EEEEECCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECHHHHHHHHHHHCCCCEEEEEH
DEVEKIEPNLNIDFKKALYSSNTASIAPFDLAISYGEIAFDNGVNFKLEEQVLEIQKLSK
HHHHHCCCCCCEEHHHHHHCCCCCCCCCEEEEEEECCEEECCCCCEEHHHHHHHHHHHCC
GYKIITNKNKFNCNIVINTTPDENFGIYSDTKRNYKKSNLNYLLIEKNSIKEFNNIVVKL
CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCHHHCCCCEEEEECCCHHCCCCEEEEE
GNNENIKKILAVPTVQGSMVLAVDTYEKINYKNTLDVSALILDEINEMDINNFYQFPYYD
CCCCCCEEEEEECCCCCCEEEEEECHHHCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCC
DSIVIDDSLIDKGYIKVIVNHYGQVTMTPYIAKIVTETIVSNIKCVLKKEFIDKRRDYYK
CCEEEEHHHCCCCHHEEHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEE
FNELSLEERNKIINMDKRYGKIICACNKVTEGEIIDAIRRPLGARTLEGIKRRTGAAFGS
CCCCCHHHHHCEECCCHHCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
CQGAYCLNKVVSILARETNKFMTDIVKDSKNSKIIPCRIKEFDTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]