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The map label for this gene is yciB [H]

Identifier: 226947234

GI number: 226947234

Start: 19601

End: 20377

Strand: Direct

Name: yciB [H]

Synonym: CLM_0019

Alternate gene names: 226947234

Gene position: 19601-20377 (Clockwise)

Preceding gene: 226947233

Following gene: 226947235

Centisome position: 0.47

GC content: 21.62

Gene sequence:

>777_bases
TTGAAATTTAAAAAAAGCGTATATATTGTTGTATTTACTTTAATATTATTATTTATACCTTGCTTTATACATACAAAAAA
AGATGTAAGCACAACTAATAATTTAGACAATAAAACAAAAGAAATAAATAAAAGTGAAGTGGATAGAAATGAAATGTCAG
TATTTTCATCTAATACTTGTTTTAAAAAAACTTATTATATAAATAAAAATAAAGTACCAGTATATAAAAATTTTGATTGT
AATAGCGAAGTATTATATTATTTATATGAAGATGATATAATTGTTAGCTATAAGGAGCAAAATGGATATATATTTTGTGA
AGAAGGAAATTTAGGAAGAAAAGGATGGATTAAAAAAAATAAAGAAAATCTTAAAGGAATTTTACATAAAAATACTGAAT
ATAAAGTAGATGTGGACTTAATAGATCAAAAGATAAGGGTATACAAAAATGATAAAATAATAAAAAATATCAAATGCTCA
ACAGGAGTTATAGGAAAACAAGATACAGAAACTCCATTAGGTATTTTTTATATTACAAATAAGGGAAAATATTTTTATAG
TAACAAATATAATCAAGGTGGTAGATATTATATTAAATTTTTTGCAAATTATTTAATTCATTCTATACCTGTAGACAAGA
ATGGTAATATAATAGAAGAAGAAAAAGACAAATTAGGATTTCCTACATCTCATGGATGTATAAGAGTACCTATGGAGGAT
TCAAAGTGGTTATATAGAAATATACCTAATAAATCTTTAATAATTATACATTATTAA

Upstream 100 bases:

>100_bases
CCCATGTATTTATAAGGGGTTCTTATTCATTTTTTGATTAAATTATCATTTATATGTAAATAATAACATTATATAGAAAA
TTAATTTGGAGTGATTGAAT

Downstream 100 bases:

>100_bases
AGTGGAGAGAAAGGCTGATAAAAAATGGATTATGATGTGATGATATTAGGTGGGGGAATAATCGGATGTGCATTAGCTTA
TGAATTATCAAAATATAGTT

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKFKKSVYIVVFTLILLFIPCFIHTKKDVSTTNNLDNKTKEINKSEVDRNEMSVFSSNTCFKKTYYINKNKVPVYKNFDC
NSEVLYYLYEDDIIVSYKEQNGYIFCEEGNLGRKGWIKKNKENLKGILHKNTEYKVDVDLIDQKIRVYKNDKIIKNIKCS
TGVIGKQDTETPLGIFYITNKGKYFYSNKYNQGGRYYIKFFANYLIHSIPVDKNGNIIEEEKDKLGFPTSHGCIRVPMED
SKWLYRNIPNKSLIIIHY

Sequences:

>Translated_258_residues
MKFKKSVYIVVFTLILLFIPCFIHTKKDVSTTNNLDNKTKEINKSEVDRNEMSVFSSNTCFKKTYYINKNKVPVYKNFDC
NSEVLYYLYEDDIIVSYKEQNGYIFCEEGNLGRKGWIKKNKENLKGILHKNTEYKVDVDLIDQKIRVYKNDKIIKNIKCS
TGVIGKQDTETPLGIFYITNKGKYFYSNKYNQGGRYYIKFFANYLIHSIPVDKNGNIIEEEKDKLGFPTSHGCIRVPMED
SKWLYRNIPNKSLIIIHY
>Mature_258_residues
MKFKKSVYIVVFTLILLFIPCFIHTKKDVSTTNNLDNKTKEINKSEVDRNEMSVFSSNTCFKKTYYINKNKVPVYKNFDC
NSEVLYYLYEDDIIVSYKEQNGYIFCEEGNLGRKGWIKKNKENLKGILHKNTEYKVDVDLIDQKIRVYKNDKIIKNIKCS
TGVIGKQDTETPLGIFYITNKGKYFYSNKYNQGGRYYIKFFANYLIHSIPVDKNGNIIEEEKDKLGFPTSHGCIRVPMED
SKWLYRNIPNKSLIIIHY

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 30378; Mature: 30378

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKKSVYIVVFTLILLFIPCFIHTKKDVSTTNNLDNKTKEINKSEVDRNEMSVFSSNTC
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHCCHHHHHEECCCCE
FKKTYYINKNKVPVYKNFDCNSEVLYYLYEDDIIVSYKEQNGYIFCEEGNLGRKGWIKKN
EEEEEEECCCCCCEEECCCCCCEEEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCC
KENLKGILHKNTEYKVDVDLIDQKIRVYKNDKIIKNIKCSTGVIGKQDTETPLGIFYITN
HHHHHHEEECCCCEEEEHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEC
KGKYFYSNKYNQGGRYYIKFFANYLIHSIPVDKNGNIIEEEKDKLGFPTSHGCIRVPMED
CCEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCC
SKWLYRNIPNKSLIIIHY
CCCHHHCCCCCEEEEEEC
>Mature Secondary Structure
MKFKKSVYIVVFTLILLFIPCFIHTKKDVSTTNNLDNKTKEINKSEVDRNEMSVFSSNTC
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHCCHHHHHEECCCCE
FKKTYYINKNKVPVYKNFDCNSEVLYYLYEDDIIVSYKEQNGYIFCEEGNLGRKGWIKKN
EEEEEEECCCCCCEEECCCCCCEEEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCCC
KENLKGILHKNTEYKVDVDLIDQKIRVYKNDKIIKNIKCSTGVIGKQDTETPLGIFYITN
HHHHHHEEECCCCEEEEHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEC
KGKYFYSNKYNQGGRYYIKFFANYLIHSIPVDKNGNIIEEEKDKLGFPTSHGCIRVPMED
CCEEEECCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCC
SKWLYRNIPNKSLIIIHY
CCCHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]