Click here to switch to the map view.

The map label for this gene is csd1

Identifier: 226945226

GI number:

Start: 3269406

End: 3271202

Strand: Reverse

Name: csd1

Synonym: Avin_31610

Alternate gene names: NA

Gene position: NA

Preceding gene: 226945227

Following gene: 226945225

Centisome position: NA

GC content: NA

Gene sequence:

>1797_bases
ATGATCCTCTCGGCGCTCAATGACTATTACCAGCGGCTGCTGACACAGGATGTCGGTATCGCGTTGCCGGGGTATAGCCA
AGAAAAGATCAGCTATGTGCTGGTGCTGTCGCCGGGAGGCGAACTGGTCGATGTGCAGGATATTCGGGTACAGGCTGGCA
AGAAGCTGCAGCCCGGACTACTCAGTGTGCCACAGCCGGAAAAGCGTACCTCCGGGGTGAAGTCCAATTTTCTCTGGGAC
AAGACTAGCTATGTGCTGGGTGTCAGTGCCAAAGAGGGTGGGCGCATGGCTCAGGAGCATCAGGCATTCAAGGAGCTGCA
ATGCAGTTTTCTTGGCGACAGCTCCGATCCAGGCCTGCAGGCCCTGCTCAAGTTTCTCGCTCAGTGGACGCCCGAGCAGT
TCCTGCCACCGCTGTTCAATGTGGAGATGCTCGACAGCAATCTGGTGTTCCGTCTCGATGGCCAGTTGCACTATCTGCAC
GACACGCCAGCGGCTCAGTCCATCTGGAGCCGGCTGCAGGCAGGGACTGACTGCAAGCAGGGCCTGTGTCTGGTCACGGG
CGAGTATCAGCCGCTGGCGCGCCTGCATCCGGCGATCAAGGGGGTGAACGGGGCACAAAGCTCCGGAGCCTCCATCGTCT
CGTTCAACCTTGAATCTTTCAGCTCCTACGGTAAGAGCCAGGGCGACAACGCCCCGGTGTCCGAGCGGGCGGCCTTCGCC
TACACCACGGTACTCAACCACCTGCTGCGCCGCGATGACAGCAATCACCAGCGTCTGCAGATCGGCGATGCCAGCGTGGT
GTTCTGGGCCGAGGCGGCCAGTGCGGCCCAGGCGGATGCGGCGGAAACCCTGTTCTGGGAAATGCTCGATCCGCCCGCCG
ACGATGCCTCCGAAACCGAACGCTTGCGGCAGGCACTGGAAGCGGTTGCCAGCGGGCTGGCGCTGCGCGAGCTGAACCCT
GAGCTGGAGGATGACACCCGGCTGCATGTGCTGGGGTTGTCGCCCAATGCCTCGCGTCTGTCGATCCGCTTCTGGGAAAG
TGGCAGCCTGCACAGCTTTGCCAAGCGACTGGCCGAGCATTTTCAGGATCTGGCGCTGCAGCCGCAGCCATGGAAGACCG
AGCCGGCCATGTGGCGGCTGCTGCATGCCACAGCCCCCAGCCGCGATGGCAAGAGCAAGGCCGAGGATATTCCGCCGCAA
CTGGCCGGCGAACTGACCCGCGCCATCCTGACCGGCAGCCGTTACCCGCGCAGCCTGCTCAACACCATCATCATGCGCCT
GCGTGCCGACGGCGATATCTCCGGCGTGCGGGTCGCACTGTGCAAGGCCGTTCTGGCGCGTGATCTGCGCCTCGGCGTCA
AGGGCATCAACGAGGAAATCCCCATGAGTCTCGACAAGGAAGCCAGCAATCCCGGCTACCGGCTGGGTCGGCTGTTTGCG
GTATTGGAGAGCGTGCAGCGTGGCGCGCTGGGCAAGCACGTCAATGCCACCATTCGAGACCGCTACTATGGTGCAGCCTC
GGCCACGCCGGCCACGGTATTCCCGATGCTGCTGCGCAATACGCAGAATCATCTGGCCAAGCTGCGCAAGGAAAAACCTG
GACTGGCGGTCACGCTGGAAAAGGAAATCGGCGAAATCATCGACGGCCTGCCACCGCAGTTTCCGCGCAGCCTGCGCCTG
GAAGACCAGGGTCGTTTTGCCATCGGCTACTACCACCAGTCCCAGGTACGCTCTACCCACGGCAAGGACGAAGACGCCGA
CGTCACCGAATCCACCGAGCAAGGAACACAGGAATGA

Upstream 100 bases:

>100_bases
ACATCGACTTTGCTAACGATATGACACCGCATTTCTTCCGCGCAGTCATGCGCGATGGCGTGATCGAGGTGCCGGCGCTG
CGTAGCGAGGGGGTCAAGGC

Downstream 100 bases:

>100_bases
GCGCCATCGCCAACCGTTACGAATTTGTCTATCTGTTCGAAGTCACCAACGGCAACCCGAATGGCGATCCGGACGCCGGC
AACCTGCCGCGCCTCGACCC

Product: CRISPR-associated protein Csd1

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>598_residues
MILSALNDYYQRLLTQDVGIALPGYSQEKISYVLVLSPGGELVDVQDIRVQAGKKLQPGLLSVPQPEKRTSGVKSNFLWD
KTSYVLGVSAKEGGRMAQEHQAFKELQCSFLGDSSDPGLQALLKFLAQWTPEQFLPPLFNVEMLDSNLVFRLDGQLHYLH
DTPAAQSIWSRLQAGTDCKQGLCLVTGEYQPLARLHPAIKGVNGAQSSGASIVSFNLESFSSYGKSQGDNAPVSERAAFA
YTTVLNHLLRRDDSNHQRLQIGDASVVFWAEAASAAQADAAETLFWEMLDPPADDASETERLRQALEAVASGLALRELNP
ELEDDTRLHVLGLSPNASRLSIRFWESGSLHSFAKRLAEHFQDLALQPQPWKTEPAMWRLLHATAPSRDGKSKAEDIPPQ
LAGELTRAILTGSRYPRSLLNTIIMRLRADGDISGVRVALCKAVLARDLRLGVKGINEEIPMSLDKEASNPGYRLGRLFA
VLESVQRGALGKHVNATIRDRYYGAASATPATVFPMLLRNTQNHLAKLRKEKPGLAVTLEKEIGEIIDGLPPQFPRSLRL
EDQGRFAIGYYHQSQVRSTHGKDEDADVTESTEQGTQE

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA