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The map label for this gene is hrpA

Identifier: 226943744

GI number:

Start: 1608506

End: 1612630

Strand: Direct

Name: hrpA

Synonym: Avin_16270

Alternate gene names: NA

Gene position: NA

Preceding gene: 226943743

Following gene: 226943745

Centisome position: NA

GC content: NA

Gene sequence:

>4125_bases
ATGACCGACGCAATGCCCGCTTTCGACTCTCTCCTGAACAACCTCGACCACGCCCTGATCGCCGATCGTCACCGCCTGCG
CCGCCAGCTCCACGAACTGCGCAAGAAGCCGGGGACGCCCCAGTCCGACGAGGCGAGGCTGGCGCACTGGCTGGAGCGCT
TCCAGGCCTCCTGCGCCAGGGTCGAGGCGCGGCGGGCCAGCGTGCCGGCGCTGCGCTACGACGACCAGTTGCCCATCGCC
GCCAAGCGCGAGGAGATCAAGGCGGCGCTTGAGAAACATCAAGTGCTGGTGATCGCCGGCGAGACCGGCTCGGGCAAGAC
CACCCAGTTGCCGAAGATCTGTCTGGAGATCGGTCGCGGTGCGCACGGGCTGATCGGCCACACCCAGCCCCGGCGCCTGG
CGGCGCGCAGCGTGGCGACCCGGGTGGCGGAGGAGATCGGCTCGCCGCTGGGCGAACTGGTCGGCTATCAGGTGCGCTTC
GAGGACCAATCCAACGAGCGCAGCCTGATCAAGCTGATGACCGATGGCATCCTGCTCGCCGAGACCCAGCACGATCGCTA
CCTGGAGCGCTACGACACCATCATCGTCGACGAGGCCCATGAGCGCAGCCTGAACATCGACTTCCTGCTCGGCTACCTGA
AGACCCTGTTGCCGCGCCGGCCCGACCTCAAGGTCATCATCACTTCGGCGACCATCGATCTGGAGCGTTTCTCCAGGCAC
TTCAACGCTGCGCCCATCGTCGAGGTGTCCGGGCGCACCTACCCGGTGGAAACCTGGTATCGCCCGCTGGCCGCCGAGGT
TGACGAGGAGGGCAACCGGGTCGAGGACGACCTGAGCGTCGACCAGGGCATCCTCGCCGCCCTCGACGAGATCGCCGCCC
ACGAGCGCTCGGTCGGCAAGCGTCCCGGCGACGTGCTGGTGTTCCTGCCCGGCGAGCGCGAGATCCGCGACTGCGCCGAG
GTACTGCGCAAGGCCAACCTGAAACACACCGAGGTCCTGCCGCTCTACGCTCGCCTGACCCCGGCCGAGCAGCAGAAGAT
CTTCCGCCCGGCGGCCGGGCGCAAGATCGTCCTGGCGACCAACGTCGCCGAGACCTCGCTTACCGTGCCGGGCATCCGCT
ACGTGATCGATAGCGGCACGGCGCGGATCAGCCGCTACAGCTACCGGGCCAAGGTCCAGCGTCTGCCCATCGAGGCCGTC
TCCCAGGCCAGCGCCAACCAGCGCAAGGGCCGTTGCGGGCGGGTGGAGCCGGGCATTTGCGTGCGCCTTTACAGCGAGGA
GGATTTCCTCGCCCGTCCGGAGTTCACCGATCCGGAAATCCTGCGTACCAACCTCGCCGCGGTGATCCTGCAGATGCTCC
ACCTGCGCCTGGGCAGCATCGAGGATTTCCCCTTCATCGAGCCGCCGGACGGCAAGGCGATCAGCGACGGCTTCAACTTG
CTGCAGGAGCTGTCCGCGGTCACCCGCGAAGGCCAGCTCACTCCGCTCGGCCGTCAACTGGCGCGCCTGCCGGTGGACCC
GCGCCTGGGCCGCATGCTGCTGGAGGCCGCCCGCCTGGGCAGCCTGGAAGAGGTACTGATCGTCGCCAGCGCGCTGTCCG
TGCAGGACGTGCGCGAGCGCCCGGCGGAACGCCAGCAGGCCGCCGACCAGGCCCATGCCCAGTGGAAGGACCCGGATTCC
GACTTCGCCGCGCTGATCAACCTCTGGCGCGGCTTCGAGGAGCAGCGCCAGGCGCTGGGCTCCAACGCCCTGCGTACCTG
GTGCCGGAAGAATTTCCTCAACTACCTGCGCCTGCGCGAATGGCGCGACGCCCACCGTCAGCTCGCGCTGATCGTGCGTG
AACTCAAGCTCGGCATGGGCCAAGCGGTGGATGGCTCCGGCCATCCACCCTACGCAAAATCCGACTCCCGTAGGGTGGAC
AACGCCGAAGGCTTTTCCACCGGACAGGGCCGTAGGGTGGACAACGGCGAAGCCTTGGCCAGCGAAGTGCCCGCCCCGAC
TACCGACAACAAGGTCAACGCCATCGTTCGCCAGCAGGCCGAGGCCAGCGAGGCCGCGCAGAAGGTCAGGAACTACTCCG
CCGTGCACAAGGCCATCCTCTCCGGCCTGCTCAGCCAGATCGGCCAGAAGACCGAGGAGGGCGACTACCTCGGCGCCCGC
CAGCGGCGGTTCTGGATTCACCCCTCCAGCGTGATCGGCCGCAAGAAGCCGGCCTGGGTGATGGCCGCCGAGCTGGTCGA
GACCACCAAGCTGTTCGCGCGCATGGTGGCGAAAATCGAGCCGGACTGGATCGAGCCGCTGGCCGGCCATCTGCTCAAGA
AGAACCATTTCGAACCGCACTGGGAGAAGAAGCGCGGCCAGGTCGTCGCCTTCGAGCAGATCACCCTCTACGGGCTGATC
GTGGTCGGTCGCCGTCCGGTGCACTACGGGCCGGTCGATCCGCAGGTTTCCCGCGAGCTGTTCATCCGCGAGGGGCTGGT
GCGCGGCGAGATCGCCAGCCGCGCCAGGTGCCTGAGCGCCAATCGGGAACTGCTGGAGTTGCTCGACGAACTGGAGGCCA
AGGCGCGCCGGCGCGACATCCTCGCCGACGAGGAAACCCTGTTCGCCTACTACGAGGCGCGCCTGCCGGCGGACATCTGC
CAGACCGCGAGTTTCGACGACTGGTACCGGCGCGAGAGCGCGAAGGACCCGCAGCTTCTGATGATGCGCGAGGAGGACGT
GCTGGCCCGCGACGCAAGCGAGGTCACCGCCGCGCAATACCCCGACAGCCTGCGCCTCGGCGAGCTGCAATTGCCGCTGA
CCTACCATTTCGAGCCGGGCCATCCCCGCGATGGGGTGACCGTCCGCGTGCCGGCGCCGCTGTTGCCGCAACTGCCGGCC
GAACGTCTCGACTGGCTGGTGCCGGGCCTCCTGGAGGCCAAGTGCGTGGCCCTGGTGCGCAACCTGCCCAAGGCGATCCG
CAAGAACTTCGTGCCGGTACCGGACTTCGTCAAGGCGGCGCTGGCCAGGATGGCCTTCGCCGAAGGCGCCTTGCCCGAGG
CGCTGGGCCGCGAGCTCACGCGCATGACCGGCGCCCGCGTGCCCGAGGAGGCCTGGGTGGAGGCCGCCGTCCAGCTCGAG
AATCACCTGAAGATGAACATCGAGGTGGTCGATGCGCGCGGCAAGTTCCTCGGCGAGGGCCGCGACCTGGCCGAACTGAC
CGCCCGCTTCGCCGAGGCCAGCCAGGCGGCCCTGGCCATCCCGCAACGCAAGGCCGACGCCGCGCCGGTCGAGGCCAAAG
GCTTCGCCCCGCTGGCGGAAAAGACCCAGCAGAAGATCGCCGGCCTCTCCATGACGGTGTTCCCGGCGCTGGTGGAAGAG
GCCGGCACGGTGAAGGAGAACCGCTTCCCGACCCAGGCCGAGGCCGACTTCCAGCACCGCCGCGCCCTGCAACGCCTGCT
CCTGCAGCAACTGGCCGAACCGGCCAAGCAGTTGCGCGGCAAGCTGCCAGGACTCACCGAGCTCAGCCTGCTGTACCGCG
ACATGGGCAAGCCGGACGCCCTGGTCGAGGACATTCTTCTGGCCAGCCTCGACGCCAGCATCCTCGACGGCGAGCCGCAA
CTGCCCCGCGACGGTGCCGCGCTGGCCGCGCTGGCCGAGCGCAAGCGCGGCGCCTGGGCCGAACAGGCCGGCCGCCTGGC
GAAGCTGGTGCTGGACATCCTCAAGCTGCGCCACGACCTGCAGAAGCGTTTCAAGGGGCGCATCGACCTGGCCCAGGCCG
TTGCCCTCAACGACATCAAGGCCCAACTCGCCCGGCTCGTCTTCCCCGGCTTCGTCCGCGACACGCCGGCCGACTGGCTG
CGCGAGTATCCCCGCTACCTCAAGGCCATCGAGCAGCGCCTCGACAAGGTCGGCGGCCAGCTCCAGCGCGACCGCGTCTG
GAGTGGCGAACTCGCCGCCCTCTGGGAGCAATATCAGGCCCGCGCCGCCAAGCACGCCCAGGAGGGCAAGCGCGACCCCG
AGCTGACCCTGTATCGCTGGATGCTGGAGGAATACCGGGTATCGCTGTTCGCCCAGCAACTGGGGACCAGGATGCCGGTG
TCGGACAAGCGGCTGAGCAAGCAATGGGCGGCGGTGGAAACCTGA

Upstream 100 bases:

>100_bases
GCGAAACGGGAAAGGCGCCTTTCCCGCCGAACCCGGAACGACTCCCGCCGGCCAAATCTGCGACAATCGCGGCTTTTCAG
CGAATCGCCAACGGCTGTCC

Downstream 100 bases:

>100_bases
GCCGGAACATTTTCCGGTTCTCGGCTCATACGGGGTGGAAAATCGCGCAGCCAAACTATCAACTACACCACGGCCCGCCA
GCATCTGGCGGAAACCATGG

Product: ATP-dependent DEAH box helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1374_residues
MTDAMPAFDSLLNNLDHALIADRHRLRRQLHELRKKPGTPQSDEARLAHWLERFQASCARVEARRASVPALRYDDQLPIA
AKREEIKAALEKHQVLVIAGETGSGKTTQLPKICLEIGRGAHGLIGHTQPRRLAARSVATRVAEEIGSPLGELVGYQVRF
EDQSNERSLIKLMTDGILLAETQHDRYLERYDTIIVDEAHERSLNIDFLLGYLKTLLPRRPDLKVIITSATIDLERFSRH
FNAAPIVEVSGRTYPVETWYRPLAAEVDEEGNRVEDDLSVDQGILAALDEIAAHERSVGKRPGDVLVFLPGEREIRDCAE
VLRKANLKHTEVLPLYARLTPAEQQKIFRPAAGRKIVLATNVAETSLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAV
SQASANQRKGRCGRVEPGICVRLYSEEDFLARPEFTDPEILRTNLAAVILQMLHLRLGSIEDFPFIEPPDGKAISDGFNL
LQELSAVTREGQLTPLGRQLARLPVDPRLGRMLLEAARLGSLEEVLIVASALSVQDVRERPAERQQAADQAHAQWKDPDS
DFAALINLWRGFEEQRQALGSNALRTWCRKNFLNYLRLREWRDAHRQLALIVRELKLGMGQAVDGSGHPPYAKSDSRRVD
NAEGFSTGQGRRVDNGEALASEVPAPTTDNKVNAIVRQQAEASEAAQKVRNYSAVHKAILSGLLSQIGQKTEEGDYLGAR
QRRFWIHPSSVIGRKKPAWVMAAELVETTKLFARMVAKIEPDWIEPLAGHLLKKNHFEPHWEKKRGQVVAFEQITLYGLI
VVGRRPVHYGPVDPQVSRELFIREGLVRGEIASRARCLSANRELLELLDELEAKARRRDILADEETLFAYYEARLPADIC
QTASFDDWYRRESAKDPQLLMMREEDVLARDASEVTAAQYPDSLRLGELQLPLTYHFEPGHPRDGVTVRVPAPLLPQLPA
ERLDWLVPGLLEAKCVALVRNLPKAIRKNFVPVPDFVKAALARMAFAEGALPEALGRELTRMTGARVPEEAWVEAAVQLE
NHLKMNIEVVDARGKFLGEGRDLAELTARFAEASQAALAIPQRKADAAPVEAKGFAPLAEKTQQKIAGLSMTVFPALVEE
AGTVKENRFPTQAEADFQHRRALQRLLLQQLAEPAKQLRGKLPGLTELSLLYRDMGKPDALVEDILLASLDASILDGEPQ
LPRDGAALAALAERKRGAWAEQAGRLAKLVLDILKLRHDLQKRFKGRIDLAQAVALNDIKAQLARLVFPGFVRDTPADWL
REYPRYLKAIEQRLDKVGGQLQRDRVWSGELAALWEQYQARAAKHAQEGKRDPELTLYRWMLEEYRVSLFAQQLGTRMPV
SDKRLSKQWAAVET

Sequences:
NA

Specific function: NA

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA