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The map label for this gene is rnr

Identifier: 226942910

GI number:

Start: 720260

End: 722845

Strand: Direct

Name: rnr

Synonym: Avin_07620

Alternate gene names: NA

Gene position: NA

Preceding gene: 226942908

Following gene: 226942911

Centisome position: NA

GC content: NA

Gene sequence:

>2586_bases
ATGGCCGATTGGCAAAGTCTCGATCCCGAGGCCGCCCGCGAGGCGGAAAAGTACGATAACCCCATTCCCAGTCGCGAGCT
GATCCTGCAGCGTCTCGACGAGCGCGGCGCCCCCGCCAGTCGCGAAGAGCTGGCCGAGGAGTTCGGCCTGCACGAAGAGG
AGCAGCTCGAGGCACTGCGCCGGCGTTTGCGTGCCATGGAGCGCGATGGCCAGTTGATCCATACCCGTCGCGGCACCTAT
GCGCCGGTGGACAAGCTCGATCTGGTGCTCGGCCGGGTCAGCGGTCACCGCGACGGCTTCGGCTTCCTGATTCCCGACGA
CGGCAGCGACGACCTCTTCCTCAGTCCGATGCAGATGCGCTTGCTGTTCGACGGCGACCGCGCCCTGGCGCGGGTGTCCG
GCTTCGACCGGCGGGGGCGCCGCGAGGGCGCCATCGTCGAAGTGGTTTCGCGGGCCCATGAAAGCATCGTCGGCCGCTAC
TACGAGGAGAGCGGCATCGGCTTCGTGATTCCCGACAACCCGAAGATCCAGCAGGAGGTGCTGGTCACCCCGGGGCGTAC
GGCCAACGCCTCGGTCAGTCAGTTCGTCGAGATCCGTATCACTCACTGGCCGACCCTGCGCTTCCAGCCGCAGGGCGACA
TCATCGAGGTGATCGGCAACTATATGGCGCCGGGCATGGAGATCGAGGTCGCCCTGCGCAGCTATGACATCCCCCATGTC
TGGCCGGAGGCCGTGCTCAAGGAGTCGCGCAAGCTCAAGCCCGAGGTGGATGAGAAGGACAAGCTCAAGCGCATCGACCT
GCGCCACCTGCCTTTCGTCACCATCGACGGCGAGGATGCCCGCGACTTCGACGACGCGGTCTATTGCGAGAAGAGCCTGC
TGGCCCCATTCGCCGGAGGTTACCGCCTCTACGTGGCGATCGCCGACGTTTCCCATTACGTCAGGGTCGGTTCGGCGCTC
GACGAGGAGGCCAGCCGCCGCGGCAACTCGGTGTATTTCCCCGAGCGAGTGGTACCGATGCTGCCGGAGGAGCTGTCCAA
CGGACTCTGCTCGCTCAACCCGCAGGTCGACCGGCTGGCGATGGTCTGCGAGATGACCCTGTCGCGCGCCGGCAAGATGA
CCGACTACCAGTTCTACGAGGCGGTCATCCATTCCCATGCCCGACTGACTTACAACCGCGTCAGCGCCATGCTGGAGCAG
CCGAAGAGCCCCGAAGGCAAGCGGCTGCGCAGCATCTATGCCGGGGTGCTGCCGCACCTCAAGCAACTGCATTCGCTCTA
CAAGGTGCTGGTGAAGGCGCGTCAGGCGCGTGGCGCCATCGACTTCGAAACCCAGGAAACGCGCATCGTCTTCGGCACCG
GGCGCAAGATCGCGGAAATCCTGCCGACCGAGCGCAACGATGCGCACAAGTTGATCGAGGAGTGCATGCTCTGCGCCAAC
GTGGCGACCGCCGCGTTCCTGCAGAAGCACGAGTTGCCGGGCCTCTACCGGGTACACGATGGCCCGCCGGCGGAGCGCCT
GGAGAAGCTCAAGGCCTTCCTGGGCGAACTGGGCCTGAGCCTGCATCGCAGCAAGGACGGCCCGACCCCGAAGGACTACC
AGATGCTGCTGGAGTCGATCCAGGGGCGAGCGGATTTCCACCTGATCCAGACGGTGATGCTGCGCTCGCTGAGCCAGGCC
GTGTACAGCGCCGAGAACCGCGGCCACTTCGGCCTGAACTACGAGGCCTATACCCATTTCACCTCGCCTATCCGGCGCTA
TCCGGATCTTCTGGTGCACCGTGCGATCCGTAGCGTGATCCGTTCCAAGCGCGAGACGCCGCATGTCCGCCGCGCGGGGG
CGACGAGTATGCCCAAGGCGCGCATCTATCCCTACGACGAAGCCGCCCTGGAGCAACTCGGCGAGTCCTGCTCGATGACC
GAGCGGCGAGCCGACGAGGCGACCCGCGACGTGGTCAACTGGCTGAAGTGCGAGTTCATGCAGGATCGCGTCGGCGAGCG
CTTCGAGGGGGTGATTTCGGCGGCGACCGGCTTCGGCATCTTCGTCGAGTTGAAGGACATCTACGTCGAGGGGCTGGTGC
ACGTCACCGCATTGCCGGCCGACTACTACCACTTCGATCCGGTTCATCATTGCCTGTCCGGGGAGCGCAGCGGGCGCAGC
TTCCGTCTCGGCGACAGCGTGGTCGTGCAGGTGATGCGGGTCGATCTGGACGAGCGGCGGATCGATTTCGAGCTGATCGA
GGGCGGCCGCGGACGAATGGCCGGGCGTCGGCGTGACTCCGAGCCGCCGGAAGAGCCGGTCGAGGAGCGCGCCGTGAAGG
GGCCGGGCAAGCGCGCCAAGGAGGACAAGGCCAAGGGGCTGGCGCCGCTGGCTTCCGAACTGCTGGCCCAGGCCGAGGCC
ATGCTCGGCAATACCGACGTGAAGAGAAGCCGGGCGACCAAGCAGGCCTTGCTGGCCGAGGCCAAGGACGCCAAGACGGA
GCGCCGGAAGACGGCCAAGGCTCCTGCCGGGAAGAGCAGCGCCAAGCAGTCCAAACCGGCCGGCAGGGGACCCTCCCGCA
AGGGCCGGAGCAAGGCCGGGACATGA

Upstream 100 bases:

>100_bases
TTATTGTCCTCTTGAAGCTGACCGACAGATGGATTTCGCGCTTCAATAAGCAAATGGCAAACATACGAACGGAAACCATG
AAAAAGGTGACAACGCACTG

Downstream 100 bases:

>100_bases
GCGATCTGGAAAGGATCTACGGCGTGCATGCCGTCGAGGCCCTGCTGCGCCATCACCCGCGCAGGGTCAAGCGCCTCTGG
CTGGCCGAAGGGCGTCAGGA

Product: ribonuclease R

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>861_residues
MADWQSLDPEAAREAEKYDNPIPSRELILQRLDERGAPASREELAEEFGLHEEEQLEALRRRLRAMERDGQLIHTRRGTY
APVDKLDLVLGRVSGHRDGFGFLIPDDGSDDLFLSPMQMRLLFDGDRALARVSGFDRRGRREGAIVEVVSRAHESIVGRY
YEESGIGFVIPDNPKIQQEVLVTPGRTANASVSQFVEIRITHWPTLRFQPQGDIIEVIGNYMAPGMEIEVALRSYDIPHV
WPEAVLKESRKLKPEVDEKDKLKRIDLRHLPFVTIDGEDARDFDDAVYCEKSLLAPFAGGYRLYVAIADVSHYVRVGSAL
DEEASRRGNSVYFPERVVPMLPEELSNGLCSLNPQVDRLAMVCEMTLSRAGKMTDYQFYEAVIHSHARLTYNRVSAMLEQ
PKSPEGKRLRSIYAGVLPHLKQLHSLYKVLVKARQARGAIDFETQETRIVFGTGRKIAEILPTERNDAHKLIEECMLCAN
VATAAFLQKHELPGLYRVHDGPPAERLEKLKAFLGELGLSLHRSKDGPTPKDYQMLLESIQGRADFHLIQTVMLRSLSQA
VYSAENRGHFGLNYEAYTHFTSPIRRYPDLLVHRAIRSVIRSKRETPHVRRAGATSMPKARIYPYDEAALEQLGESCSMT
ERRADEATRDVVNWLKCEFMQDRVGERFEGVISAATGFGIFVELKDIYVEGLVHVTALPADYYHFDPVHHCLSGERSGRS
FRLGDSVVVQVMRVDLDERRIDFELIEGGRGRMAGRRRDSEPPEEPVEERAVKGPGKRAKEDKAKGLAPLASELLAQAEA
MLGNTDVKRSRATKQALLAEAKDAKTERRKTAKAPAGKSSAKQSKPAGRGPSRKGRSKAGT

Sequences:
NA

Specific function: NA

COG id: COG0557

COG function: function code K; Exoribonuclease R

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA