Definition Laribacter hongkongensis HLHK9, complete genome.
Accession NC_012559
Length 3,169,329

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Identifier: 226939877

GI number:

Start: 910802

End: 912232

Strand: Reverse

Name: Not Available

Synonym: LHK_00949

Alternate gene names: NA

Gene position: NA

Preceding gene: 226939879

Following gene: 226939875

Centisome position: NA

GC content: NA

Gene sequence:

>1431_bases
ATGAACGCACCGACTCCAGCCCTGTACCGCCAGCTGGCCGACGACATTGCCGGCCAGATCCATCAAGGTATCCTGCACGC
CGGCGAACGCCTGCCCTCGCTGCGGAACATGCGCGAACGTACCGGGCTGAGCCTGAATACGGTACAGGAAGCCTTCCGCC
TGCTGGAAGACCGGGGACTGGTGGATGCGCGTCCCCAGTCCGGCTTTTTCGTGCGCCGCCAGAGTCATGACGCACCGCCG
CCACCCATGCAGCCAACCACGATTACAGTCGATCCCCTGCTGTGGAACTATGTGCAGGACATCCGCCTGCAATACGAGGG
GCGACTGTGCGGATTCCGCAGCGTCATCCCGCCAGCCGGACTGTTGCCGGTCACCCAGCTGCAACGCCTGCTGGTGGATT
GCGCGCGCCGGCGTCCGGACCTGCTGGCCGACTACGGCTCGCCCAGCGGCATTCCGGAACTGCGCCGCCAGGTGGCCCGG
CATGCGCTGGCCTGGGGTGGGCAGATGGCACCGGACAACCTGATCGTCACCCTCGGCACCATCGAGGCTCTCAATCTGGC
CCTGCGCGCCCTGACCCGGCCCGGTGACGTGGTGGCAGTCGAGTCTCCCACCTATTTTTCCCTGCTCCAGTGCCTGGAAT
CCCTCGGCCTGCGGGTGGTGGAAATCCCCACCGATCCGGCCACCGGCATTTCAGTGGAAGCGCTGGAGCTGGCCACGCGG
GACCATGCCGTGCAGGCCGTGGTGCTGGTGCCGAATTTTTCCAATCCGACCGGGGCACTGATGCCGGATCATGCCAAGGC
CCAGGTGGCCAAGCTGATGAGCGAGCGCGACATTCCGCTGATCGAAGACGATGTGTATGGCGAACTGCATTTCAGCGGCC
CGCGCCCCCGTCCCATCAAGGCGTTTGACCGTACCGGACACGTGCTCTACTGCTCCTCGCTGACCAAGGCCGTGGCACCG
GGGCTGCGTATCGGCTGGATCGAACCCGGCCGCTACCGCGACCGGGTGCTGATACAGAAATACATCACTACCCACTCCAC
TCCCTCGCTCAACCAGCTGGTGCTGGCCCGCTTCATGGAGGACGGCGGCTACCAGCGCCACTTGCGCCAGTTCCGTCGCC
GCACCCGCGAACAGGTCGAGCTGGTAGCCGATGCGGTTGAACGGTTTTTTCCGCCCGGCACGCGCTTTTCCCGCCCCCAG
GGCGGCTTTGCACTCTGGCTGGAATTGCCGGACCCGGCATTCGACAGCGTGAAGCTGTTCCACGCAGCCCGGAAGGAAGG
CATCGGCATGGCCCCCGGCCCGCTGTTTTCGGCACGGGGCGGCTATCGCCATGCCCTGCGCCTGTCCTGTACGGCTCCGT
GGGATGCCGACCAGGACAGGCGGCTGGCACGGCTGGGCGAACTGGCCGGACAGCAACTGCTCAGGCCGTAG

Upstream 100 bases:

>100_bases
AAGTTGCAGCAGTACAGTTGCAGCCTGGCGGCAACTGTCACCCTCCCGGAGAGCGCAATCTGTCACTGTGCTGCACCGCC
ACATCGTTTATGATTTTTGC

Downstream 100 bases:

>100_bases
CCGCGCCACATGCCGGCACGGTACCGGCCACCAGTGCAGGACAAATCGATCACCGCAGGGCTGCACGTTTCTGGTCACCG
TGCGGAACGGTAGCCGAACC

Product: Transcriptional regulator, GntR family/aminotransferase class-I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>476_residues
MNAPTPALYRQLADDIAGQIHQGILHAGERLPSLRNMRERTGLSLNTVQEAFRLLEDRGLVDARPQSGFFVRRQSHDAPP
PPMQPTTITVDPLLWNYVQDIRLQYEGRLCGFRSVIPPAGLLPVTQLQRLLVDCARRRPDLLADYGSPSGIPELRRQVAR
HALAWGGQMAPDNLIVTLGTIEALNLALRALTRPGDVVAVESPTYFSLLQCLESLGLRVVEIPTDPATGISVEALELATR
DHAVQAVVLVPNFSNPTGALMPDHAKAQVAKLMSERDIPLIEDDVYGELHFSGPRPRPIKAFDRTGHVLYCSSLTKAVAP
GLRIGWIEPGRYRDRVLIQKYITTHSTPSLNQLVLARFMEDGGYQRHLRQFRRRTREQVELVADAVERFFPPGTRFSRPQ
GGFALWLELPDPAFDSVKLFHAARKEGIGMAPGPLFSARGGYRHALRLSCTAPWDADQDRRLARLGELAGQQLLRP

Sequences:
NA

Specific function: NA

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA