Definition Rhodococcus opacus B4, complete genome.
Accession NC_012522
Length 7,913,450

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 226359987

GI number:

Start: 590348

End: 593083

Strand: Reverse

Name: Not Available

Synonym: ROP_05730

Alternate gene names: NA

Gene position: NA

Preceding gene: 226359988

Following gene: 226359986

Centisome position: NA

GC content: NA

Gene sequence:

>2736_bases
GTGACAACAGGTGACACGACCGGCGGCACCGAACTCGATGTGTTCTCGGCGCAGCTCGGCTTCGTGCTCGACCCCTTCCA
GATCAACGCCTGCCGCGCGCTCGAGGGCGGCCACGGCGTCCTCGTCTGCGCGCCGACCGGCGCGGGAAAGACGGTGGTCG
GTGAATTCGCGGTGCACCTGGCGCTCGCGGCCGGTCGCAAGTGCTTCTACACCACTCCGATCAAGGCGCTGAGCAATCAG
AAGTACGCGGAACTGGTGCGCCGGTACGGCAAGGACACCGTCGGGCTGCTGACCGGAGATTCGAGCATCAACTCGGACGC
TCCGGTGGTCGTGATGACCACCGAGGTGCTGCGGAACATGCTGTACGCCGATTCCGCGGCGCTGCGCGGGTTGTCGCACG
TCGTCATGGACGAGGTGCACTTCCTGGCCGACCGGTTCCGGGGGGCGGTGTGGGAAGAGGTAATTCTGCACCTGTCCGAG
GACGTCCGGCTCGTCAGTTTGTCGGCGACCGTCAGTAATGCCGAGGAGTTCGGTGCGTGGATGGAGACGGTGCGCGGCGA
CACCACCGTGGTGGTCGACGAGAACCGCCCGATTCCGCTGTGGCAGCACATCATGGTGGGAAGGCGGCTGTTCGACCTGT
TCGACACGAGGGCGCGCAGCGGGGATGCCCGTAACGATCTGGTGGTCGACCAGGATCTGGTGCGTCACGTCAAGCAGCGT
CAGGCGCTCGAGCGGGCCGACTCGTGGGAGCCGAGGGGCAGGGGGCGGCGCGGCGGCGGACGTGGCTATTCCAGCGACTT
CCGGCCGCTGCCCCGACCGGAAGTGATCTCCCGCCTCGACGACGAGGGGCTGCTCCCGGCGATCACGTTCATCTTCAGCC
GGGCCGGATGCGACGCCGCGCTGGCCCAGTGCCTGCGGTCCCGCCTCGATCTCACCACGCCGGAGCAGGTCGCCGAGATC
CGGACCATCGTCGACGCCCACACCGGCGAACTGCCGAAGGCCGACCTCGAGGTCCTCGGGTACTGGGAATGGCGCAAGGC
GCTGGAGCGTGGCCTCGCCGCGCACCACGCGGGGATGTTGCCGGCGTTCCGGCAGACGGTCGAGGAGTTGTTCGTCAAGG
GTCTGGTTCGGGCCGTGTTCGCCACCGAGACGCTGGCTCTCGGCATCAACATGCCCGCTCGGACGGTTGTCCTCGAACGC
CTGGTCAAGTACAACGGCGAGGCCCACGCCGAACTCACCCCGGGGGAGTACACGCAGCTCACGGGCCGGGCGGGACGTCG
CGGCATCGACATCGAGGGCCACGCGGTGGTCCTGTGGCAGCCGGGGGTGGAACCGGTGGACGTCGCCGGCCTGGCGTCCA
CCCGCACATTCCCGCTGCGCAGTTCGTTCCGTCCCGGCTACAACATGACGATCAACCTGGTCGACCGCATGGGTGCGGCG
GAATCGCGGGCCCTGCTCGAGCGGTCGTTCGCCCAGTTCCAGGCCGATCGGTCGGTGGTAGGCCTGACGCGGGGCATCGA
ACGCAACGAGGCCGCGCTGACCACGCTCCGCGAACGGCTCGGTGGCGAGGACGGCGAGTACTTCGAGTACGCCCGGCTGC
GGGAGGAACTGAGCAGCCGGGAACGGTCGCTCGAACGCGCAGGCCGGACCGAACGCCGGGACGCCGCCGTCGCCTCGCTC
GTCGCCTTGCGGCGGGGCGACGTGATCGCCATCCCCGTGGGGCGGCACTCCGGTCTGGCCGTGGTGCTGGAACCGGACCG
GGATCCGACGGACCCGAAACCGTTGATCCTCACCGAGGCGAAGTGGGCGGGCCGGGTGTCGGCGGGCGACTTCCCCGAGC
CGGCACGGTCTTTGGGATCGATGAGGTTGCCGCGACGCTTCGATCACCACACGGCCCGGGTGCGACGCGATCTGGCATCG
GCGTTGCGCAGCACCGGAATCGTCGCGCCGGGCCGCCGGAAGCGGAAGAAGTCGGGTGCGGCCGCCGACGACGCCGAGAT
CGCGCGGTTGCGGCGCGCGATCCGGCAGCATCCGTGCCACAGCTGGCCCGACCGCGAGCAGCTGAGCCGGATCGGTGAGC
GCTACAACCGGCTGGCCCGGGAGACGGAGACGATGCGCCAGAAGGTCGCCGCCACCACGAACTCGTTGGCGCGCACGTTC
GATCGGATCCTGTCGCTGCTCGCCGAGCGCGACTACGTCTCGGCGGGTGAGCACCCCGATGCCACCGAGCACGGCACCCG
GTTGAGCCGGATCTATTGCGAGAGCGACCTCTTGGTGGCCGAATGCCTCCGGCAAGGTGTGTGGAAGGGGCTCGGGCCCG
CGGAACTCGCCGCCGTGGCGTCCGCCGTGATCTTCGAATCGCGGCGCGAGGGGGACACCGTCGAGAGCGGCGGTCCGGGA
GCGTTGCGGCACGCCCTCGACGAGACCGTGCGGGTGTGGCGGGAACTGCGGGCGGACGAGATCCGGCACAAGTTGCCGCC
CACCCGTGAACCGGACTTCGGTTTCGCCGCCGCGATCTACCACTGGGCCAGCGACAATTCGCTCGTCGAGGCGCTGATAG
CAGCGGGAGACCAGGGGCGCGCGCTGTCCGCCGGCGACTTCGTGCGGTGGTGCAGGCAGGTGATCGACCTCCTCGAACAG
GTCCGGTCGACGTCGCCCGATCCGGAGGTCGGCAAGGCCGCGGGTCGTGCGGTCGCGGCGATCCGTCGGGGCGTCGTCGC
CGTGGATGCTGCGTGA

Upstream 100 bases:

>100_bases
GTCCGGTGCCGCGAACAAGAACGACGCTGCGAGCACGACCGGCAGCAACACACCGGGTCAGGACTTCTCCGACACCCTGT
GACAATCTGACGGGGTGGCA

Downstream 100 bases:

>100_bases
CCCGACGCCGTGTGGTTGGATTCGCACGCCGTCCGAAGGCCCGAATCCGATGGTGGGGCGTTACGGTAGGTACAAAACTT
GACACGTGAGCGGGAGGCGA

Product: helicase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>911_residues
MTTGDTTGGTELDVFSAQLGFVLDPFQINACRALEGGHGVLVCAPTGAGKTVVGEFAVHLALAAGRKCFYTTPIKALSNQ
KYAELVRRYGKDTVGLLTGDSSINSDAPVVVMTTEVLRNMLYADSAALRGLSHVVMDEVHFLADRFRGAVWEEVILHLSE
DVRLVSLSATVSNAEEFGAWMETVRGDTTVVVDENRPIPLWQHIMVGRRLFDLFDTRARSGDARNDLVVDQDLVRHVKQR
QALERADSWEPRGRGRRGGGRGYSSDFRPLPRPEVISRLDDEGLLPAITFIFSRAGCDAALAQCLRSRLDLTTPEQVAEI
RTIVDAHTGELPKADLEVLGYWEWRKALERGLAAHHAGMLPAFRQTVEELFVKGLVRAVFATETLALGINMPARTVVLER
LVKYNGEAHAELTPGEYTQLTGRAGRRGIDIEGHAVVLWQPGVEPVDVAGLASTRTFPLRSSFRPGYNMTINLVDRMGAA
ESRALLERSFAQFQADRSVVGLTRGIERNEAALTTLRERLGGEDGEYFEYARLREELSSRERSLERAGRTERRDAAVASL
VALRRGDVIAIPVGRHSGLAVVLEPDRDPTDPKPLILTEAKWAGRVSAGDFPEPARSLGSMRLPRRFDHHTARVRRDLAS
ALRSTGIVAPGRRKRKKSGAAADDAEIARLRRAIRQHPCHSWPDREQLSRIGERYNRLARETETMRQKVAATTNSLARTF
DRILSLLAERDYVSAGEHPDATEHGTRLSRIYCESDLLVAECLRQGVWKGLGPAELAAVASAVIFESRREGDTVESGGPG
ALRHALDETVRVWRELRADEIRHKLPPTREPDFGFAAAIYHWASDNSLVEALIAAGDQGRALSAGDFVRWCRQVIDLLEQ
VRSTSPDPEVGKAAGRAVAAIRRGVVAVDAA

Sequences:
NA

Specific function: NA

COG id: COG4581

COG function: function code L; Superfamily II RNA helicase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA