Click here to switch to the map view.

The map label for this gene is clpC

Identifier: 226308209

GI number:

Start: 5165741

End: 5168164

Strand: Reverse

Name: clpC

Synonym: RER_47220

Alternate gene names: NA

Gene position: NA

Preceding gene: 226308210

Following gene: 226308203

Centisome position: NA

GC content: NA

Gene sequence:

>2424_bases
ATGCCAGCATTCTTCGGGCCCGAGGGTCCCGGTCGCATCGATATTTCCCGGCTCATGAGCAGGGCCACCCAGCAACTCAT
GGCTGACGCTGCACGTGTAGCGGCTGCTCGCGGTGATTCGGATCTCGATGCACTGCACGTTCTCCGCGTCATGGCGGAGC
AGGATCCGGTCCGCACGCTCATGCAGCGCGCCGGAGCCGACCCGAAATCCGTGGTCGACGCCGTCGACCTGCGGCTGCCA
CAAGGCCGTGAGCAGGGGGCCTACTCTGCTCCTGCGCTCAGCAGCGCCGTGAAAACCGCTCTACTCGAGGCTCATCAACT
GGCCCGAGCCCTGGGATCGACGTACATCGATCCCGAACACCTCTTCATCGCATTGGCTGGTGACCCCGATCATGTTCCGG
GTCGTCTGCTCGCTTCGGCCGGCATCACGCCGGAGAAGCTGCAGGCAGCGGTTCAGAATCCTGCAGCCGGTCCAGTCGAA
GAGGAGTCCACCACACCGACGCTCGACAAGTACGGCGTCGATCTCACCGATCGCGCACGCAACGGCGGCGTCGATCCGGT
GATCGGCCGCGCCGACGAGATCGAACAGACCATCGAGATCCTCTCCCGCCGCACCAAGAACAACCCCGTCCTGGTGGGTG
AGGCCGGCGTCGGCAAGACTGCCATCGTCGAAGGTCTCGCCCAGCGCATCGTCGACGGGGATGTCCCGGAATCGTTGATG
GGCAAGAGGATAGTCCAGCTCGAACTCTCGAGCATGGTCTCGGGTACTCGCTACCGCGGAGACTTCGAGGAACGGCTGAC
CAAGGTGATCGACGAGATCACCGCACACAAGGACGAGCTGATCGTCTTCATCGACGAGATGCACACCATCGCCGGTGCCG
GAGGCGGCGCCGAAGGTGCGATGGATGCCGGAAACATCCTCAAGCCCAAGCTCGCTCGCGGTGAACTGCACATCGTCGGC
GCCACCACGCTCGACGAATACCGCAAGAACATCGAGAAGGATCCCGCGCTCGAGCGGCGCTTCCAGCCCGTACAGGTCGG
AGAGCCGTCGATCGAGGACGCGATCGCCATCTTGAGCGGACTGCGCAGTCGGTACGAGGATCACCACAAGGTCCACTACA
CCGACGAGGCGATCACCGCTGCGGTGGAGCTGTCGGCACGTTACATCGGCGACAGGTTCTTGCCGGACAAGGCAATCGAC
TTGATCGACCAGGCCGGCGCCAGGCTTCGTTTGAAGACTGCCACGGTAGACACCGCTGCTCTGCAGCAACGTCTCGAGCA
GCTCGAGAGCGACAAGGAGAAAGCCGTCGCCGACGAATTGTACGAGAAGGCGTCGACCCTGCGTGACGAGATCAACGGCG
TCGCAAAGCGTCTCGAGAAGGCAGGGTCCTCGGTTCCTTCCGAGGAAACTCCGGATGTGACTGCTGAACAGATCGCCGAA
GTTGTCGCCCGTGCCACGGGTATTCCGGCCAGTCAGATGACTCAAGCAGAGAAAGATCGCCTGCGCCGTCTGGAAGAGGA
ACTGCACGGTCGTGTCATCGGGCAAGATGACGCCGTTCGCGCAATCGCGCGTGCGGTGCGTCGTAGCCGGACCGGTATGA
GCGATCCGGATCGTCCCGTCGGTAGCTTCCTGTTCCTCGGACCTACCGGTGTCGGCAAGACGGAGCTCGCAAAAGCTCTG
GCTGCCACACTCTTCGGTGACGAGAACAAGATGCTGCGCTTCGACATGAGTGAGTTCGGTGAGAGGCATACGGTAAGCCG
ATTGGTCGGTGCTCCTCCCGGATATGTCGGCTACGGCGAGGCCGGACAGCTCACGGAACAGGTGCGTCGTAACCCGTACT
CGGTGATCCTGCTCGACGAGATCGAAAAGGCACACCCGGACGTGTTCAACACCTTGCTCCAGGTGCTCGACGACGGGCGT
CTGACCGACGGCCAGGGTCGAACGGTGGACTTCAAGAACACCGTCGTGATCATGACCAGCAACCTCGGCTCGGACATCAT
CTCGAGCAAGTCCGGTGGACTCGGCTTCACCACAGGCGATGCAGAGTCGGCGGAGAAGCCACTGCGCGACCGCGTGATGG
CCAGGTTGCGCGAATCGATGCGGCCGGAGTTCCTCAACCGTATCGACGAGATCGTGATCTTCCGCAAGCTCGACACCGAG
CAACTGCACCGGATCACTGATCTGTTGCTCGACGACAGCCGGAAGCGGTTGCAGTCCAAGGGCATCGACATCGAGTTCAC
CGCCGACGCAGTGGACTGGATTGCCGAGCACGGGCATCAACCCGAGTTCGGGGCTCGCCCGTTGCGACGTTCGATTCAGC
GTGTGGTCGACGACAAGATCGCCGACATGCTGCTCGACGATCTCCTCGAAGAGGGCGGCAGTATCACCGTCGCGGTTGAC
GAGGGTGAGTTGGTGTTCAGCTAG

Upstream 100 bases:

>100_bases
CCGAAGGTGTTGAAACAAATCTGAGCCCGCGGGAATTGATCGAGCCCCATGCACGTTAATTGAGTCAGTAACGCTCAACT
TTCTGCAAGGAGGCTTCGGA

Downstream 100 bases:

>100_bases
GAGGGGCACAGCCCCCGTGAGCGGTTAGGGAGTCTCTGGACTCCCTAACCGCTCACAGGCGCGCAGCGCCCAAAATCTCC
GCCGCCAGGGCGTCGTTGTG

Product: ATP-dependent Clp protease ATP-binding subunit ClpC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>807_residues
MPAFFGPEGPGRIDISRLMSRATQQLMADAARVAAARGDSDLDALHVLRVMAEQDPVRTLMQRAGADPKSVVDAVDLRLP
QGREQGAYSAPALSSAVKTALLEAHQLARALGSTYIDPEHLFIALAGDPDHVPGRLLASAGITPEKLQAAVQNPAAGPVE
EESTTPTLDKYGVDLTDRARNGGVDPVIGRADEIEQTIEILSRRTKNNPVLVGEAGVGKTAIVEGLAQRIVDGDVPESLM
GKRIVQLELSSMVSGTRYRGDFEERLTKVIDEITAHKDELIVFIDEMHTIAGAGGGAEGAMDAGNILKPKLARGELHIVG
ATTLDEYRKNIEKDPALERRFQPVQVGEPSIEDAIAILSGLRSRYEDHHKVHYTDEAITAAVELSARYIGDRFLPDKAID
LIDQAGARLRLKTATVDTAALQQRLEQLESDKEKAVADELYEKASTLRDEINGVAKRLEKAGSSVPSEETPDVTAEQIAE
VVARATGIPASQMTQAEKDRLRRLEEELHGRVIGQDDAVRAIARAVRRSRTGMSDPDRPVGSFLFLGPTGVGKTELAKAL
AATLFGDENKMLRFDMSEFGERHTVSRLVGAPPGYVGYGEAGQLTEQVRRNPYSVILLDEIEKAHPDVFNTLLQVLDDGR
LTDGQGRTVDFKNTVVIMTSNLGSDIISSKSGGLGFTTGDAESAEKPLRDRVMARLRESMRPEFLNRIDEIVIFRKLDTE
QLHRITDLLLDDSRKRLQSKGIDIEFTADAVDWIAEHGHQPEFGARPLRRSIQRVVDDKIADMLLDDLLEEGGSITVAVD
EGELVFS

Sequences:
NA

Specific function: NA

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA