Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 226228134

GI number:

Start: 3205627

End: 3207741

Strand: Reverse

Name: Not Available

Synonym: GAU_2728

Alternate gene names: NA

Gene position: NA

Preceding gene: 226228135

Following gene: 226228133

Centisome position: NA

GC content: NA

Gene sequence:

>2115_bases
GTGCAGGGAGAGTTCACGCCGCAGCAGGCGCTGGCCCGTCTGCTCGATGGCAGTGGGCTGACCTTCGTCTTCACCGGCGA
AAAGGTCGTCATGCTCCGCCCGCGCGGCAGCACGGTGCTTGATGCCGTCAACGTCACTGCCACACCCCGGGTGTCTTCAG
CCAAGTACACCGCTCCCCAGGTGGACATCACCCGCTCGGTCGCGGTGATCCCCAAGGACATCCTGCAGGCTCAGGGCGCG
ACCTCCCTGCGCGATGCCATCCGCAACGTGCCTGGCATCACCATCAATGCCGGCGAAGGTGGCGGCGGCATGCCGGGCGA
CAACTTCAACATCCGCGGCTTCAGTGCGGCCAACGATTTGTTCGTCGATGGTGTGCGCGATCTCAGTGGTTTTGCCCGTG
AGTCGTTCAACCTCGAACAGGTCGAAGTGCTCAAGGGGCCGAACTCCGGCATCACCGGACGCGGGTCCACTGGCGGCACC
ATCAACATGGTCACCAAGGTGCCCAGTCTGCGGGCCGATCGCAGTGGTGCCATCGTGCTGGGTTCGGCCGATCAGCGTCG
CGCCACGGCCGATGTGAACCAGCCGCTGCACGTGCCGGGCATTCCAGGCGCCGCCGTGCGCGTCGCTGCCGTTTCGAGCA
ACAGCGGCGTGGCCGGCAACGATGTGATCGAATACAACAGTTGGGGCGTTGCGCCGTCGCTCTCCGTGGGTCTGGGCACG
TCCACGCAGGTGACGCTCGCCTACACACGCTCCGAGCAGGACAACATTCCGTCATACGGTGTGGAGACCTTCAATGGCGT
GCCGACGGTGGACACGCGCCACTTCTTCGGGTTGCGCAGTCTCGACTTCGAGAAGGTCAATTCCAACAACCTGGCCCTGA
AGGCCGCGCATGTCTTCAACGAACATCTGACGCTGCGCAACCAGTTCAGCTCCGCGCATTCCGACGTGGGTCGTATCGTC
ACCCCGGTCAATCCCACCACCGGTGCACGTAGCCCGAAGACACATGCCGTCGAAAACGACATCCTCACGAATCAGACGAA
TCTGACGTCGTCGTTCGAAACGGGTGCTGTTGGGCATGATTTTGTGGCGGGCGCCGAGTTCACGCGAGAGAACAGTCTGC
GCGGAGCGTACACGATCGCCACACGGCCTTTCCCGACGATCGCGAACCTCAACGCCCCCACGGCCGATGCCGACTATCAG
TCGGCGATCACACGTACGGTGACGCGCACTGTGCGTGCGCAGTCGGCGGCGCTGTACGCCTTCGAGACGATGAAGATCGG
TTCGAAGCTCGAACTCAACGGCGGTCTGCGCTGGGATTCGTACAAGCCTGAATACACCGACTCGGCGTCGAAGGCGACCA
TCGCGAGCACGGGCAATGCGCCGGTGCGCACCACCAACGTCAGTGGCAATGCGGCGGTGAACTTCAAGCCGACCGTGGGG
AGCAGTCTGTATTTCTCCTACGGCACGTCGTTCAATCCGGCGACGGAAAACCTGTCGAACGATGCGGTGAGTGCGAACAG
CAAGCTGCCACCCGAGAAGAGCCGCTCGCTCGAAGTGGGTGCGAAGTGGGAACTGTTCAAGCAACGTCTGCTCACCTCGT
TTGCCTTGTTCCGTACGGAAAAGACCAACGCGCGCACCACCGATCCGGCCAATCCTGGATTGGGCACCATTCTCGCCGGC
AAGCAGAAGGTCGAGGGCGGTGAAGTGTCGGTCACGGGTCGTATCACGGACCACTGGGCCGTGCTGGCCGGTTACTCGCG
CATGAGTGGGAAGTACGTGGAGTCCCCGAATCCGGCGCAGACGGATGCCCCGTTCACCAATGTGCCGGCGCATAGTCTCA
ACGCCTGGACGAGTTATGCCGTGACCAAGCGTCTCGAAGTGGGTGGTGGTGGACGGTATGTGGATCGTCGTCTGCTGCGG
GCCACGGCCACGTCCACGGTGTATGTGCCGGCCTATCGCACGTACGATGCGATGGCGAAGTATCAGCTCAGCTCTACACT
CGGATTGCAGGTGAACCTGATGAACCTGACCGATGAGCTGTACTACGACAGCGGTCGGATGTGGGTGCCGGCGGCAGGTC
GTGCGGTGTCGGTGACGACATCCGTCAAGTTCTGA

Upstream 100 bases:

>100_bases
CCCGGCCGGTCCCCTCGACGCCGCCCTCAAGCAGTTCGAAGCCGCTACTGCCCTCACTCTCCGTATCGATGCTCCCATCG
TGGGCATGCAGACCAAGGGC

Downstream 100 bases:

>100_bases
CCCACACCGGACCTCACGATGCTTTTGCAAGTTCCGGAAGTGCTCACCCCCGATGAAGTCCGCGCGATGCGCGAGATGCT
TGATCGGGCCGAGTGGGTGG

Product: TonB-dependent outer membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>704_residues
MQGEFTPQQALARLLDGSGLTFVFTGEKVVMLRPRGSTVLDAVNVTATPRVSSAKYTAPQVDITRSVAVIPKDILQAQGA
TSLRDAIRNVPGITINAGEGGGGMPGDNFNIRGFSAANDLFVDGVRDLSGFARESFNLEQVEVLKGPNSGITGRGSTGGT
INMVTKVPSLRADRSGAIVLGSADQRRATADVNQPLHVPGIPGAAVRVAAVSSNSGVAGNDVIEYNSWGVAPSLSVGLGT
STQVTLAYTRSEQDNIPSYGVETFNGVPTVDTRHFFGLRSLDFEKVNSNNLALKAAHVFNEHLTLRNQFSSAHSDVGRIV
TPVNPTTGARSPKTHAVENDILTNQTNLTSSFETGAVGHDFVAGAEFTRENSLRGAYTIATRPFPTIANLNAPTADADYQ
SAITRTVTRTVRAQSAALYAFETMKIGSKLELNGGLRWDSYKPEYTDSASKATIASTGNAPVRTTNVSGNAAVNFKPTVG
SSLYFSYGTSFNPATENLSNDAVSANSKLPPEKSRSLEVGAKWELFKQRLLTSFALFRTEKTNARTTDPANPGLGTILAG
KQKVEGGEVSVTGRITDHWAVLAGYSRMSGKYVESPNPAQTDAPFTNVPAHSLNAWTSYAVTKRLEVGGGGRYVDRRLLR
ATATSTVYVPAYRTYDAMAKYQLSSTLGLQVNLMNLTDELYYDSGRMWVPAAGRAVSVTTSVKF

Sequences:
NA

Specific function: NA

COG id: COG4774

COG function: function code P; Outer membrane receptor for monomeric catechols

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA