Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

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Identifier: 226227768

GI number:

Start: 2765745

End: 2768501

Strand: Direct

Name: Not Available

Synonym: GAU_2362

Alternate gene names: NA

Gene position: NA

Preceding gene: 226227766

Following gene: 226227769

Centisome position: NA

GC content: NA

Gene sequence:

>2757_bases
ATGCTGGCGATCACGGCGGCCGTCGTTACCACCGTCGTCCCCACGCAGCTTCGCTCGCAAGCCGCCACCGCCGCCCCCGC
GGCCGATGCACAGACCGGTCGCCTCACCGGTCGCATCGTCGATGCGACCACAGGTCAGGGCATCACGGCGGCCCAGATCC
AGATTGTCGGCACGGGACTCGGTATCCAGTCCGGCGTGGACGGCCGCTACACCATCGTACGTGTGCCCGCAGGCACAGTG
ACCCTACAGGTGCGGCGCATCGGGTACGGCCCGAAGACGATTACCGGCCTGATCGTGCCCGCCAACGGCACCATCGAGCA
GGATGTGTCGCTCTCCAGCGCCGATGTACAACTGGCCGCCGTCAGCGTCACAGCGACCAAGGAAAAGGGCACCGTCTCGG
AAGCCCTCAACCAGCAGAAGAACGCCACGAATGTGGTGAACGCCATCACCGCCGAACAGATCGCCCGCAGCCCGGACAGC
GATGCGGCGCAGGCCGCGCAGCGCGTGAGCGGCGTGACCGTGCAGGACGGCAAGTATCTGCAGGTGCGTGGTCTTGGTGA
GCGTTACACCACCGCGTCGCTCAATGGCGCCCGCATTCCGAGCCCGGAACCCGAGCGCAAAGTGGTGCCGCTCGATCTGT
TCCCGGCCGGTCTGCTGCAGGACGTAACCACCAGCAAGACGTTCACCCCCGACCAGCCCGGCGATTTTGCCGGCGCGAAC
GTGAACATCCGCACGCGTGAATTCCCGGCACGTCGCCAGATCAACTACACGACCTCGGTCGGTGCGAACAATCTGGTGCG
TGGCCAGACGCTGCCCTTCGCCCCGCGCGCAGGCGGAGAACTGTTCGGCATGGCGTCGAGCTCACGTCGCATCCCCGATG
CGATCTCGCAGGCCAACTTCATGTCCAACATCCCGCAGTCGGTATACAACCAGATGGCGCTGGAACAGCGCAATGTCTGG
AATGCCACACCGCGGAAGGGCGCGATGAATGGTTCCTTCGGTGCCTCCACCGGCGGCAACACCATCCTCGGCCGCCGCGT
CGGCTACGTGCTGAGCGCCAACTACGGCTATTCGGAAGAAGTGCGCGCCAATGAACGCTTCGCCGTAGGCAATCAGGGTC
CGAACAACACCGTCGTACCGCTGACCCAGGTGGAAGGCCAGACGGGCCGCTCGAGCATCCAGTGGGGCGGCATCGCGAAC
TTCTCCACCATCGTGGGCAAGGGCAATCGTTTCTCGCTCAACACCACCGCCACGCGCAGCGCCGACAACGAAGCCCGCAT
CGATCGTGGTTTCGACGAGAACCTCGCCGACAGCATCGCCCGCACCACGCTGCGTTATGTCGAACGTTCCGTCGCCACGG
CAAACCTGCAGGGCGAACATCAGCTCAGCGAACGCAACAAGACGGCGTGGTCGGCCACGTATGCCAACACGTCGCGCAAG
GAACCGGATCGCTCGGACATCGTCTACTCGCGCGACGGCACCGGCAAGTACTCGCTGCTCTCGTCGCTCGACGGCGCGCG
CCGCCTGTACTTCGACCTGCAGGAAAACAACGCGACCGCTCAGTTCGATCACACGATGAACATCGGAGCGATCGCAAACC
AGAACGTCGTCAAGTTCGGCGCGTACATGCGGTCCACCGACCGCACGGCGCAGGCGCCGATCTACGCCTTCCTCTCGCGG
GCCGACGAAAGCATCCGTACGCAGAACCCCGATGTGATCTTCGGTGCCGGCCAGGCGTGCGCGAACTGCTCGCTCATCAA
TGTGCAACCCATCGGCCAGGCGGGTTCGTACACCGCCTCCGATCGCACCACCGCGGGGTACCTGATGACCGATTGGGGCC
TCGGTAGCCGAGTGCGTGTCATCGCCGGTGCACGCGTGGAGCAGGCCGACATCAACGTGCAGTCGAGCACGCAGGGTGGC
TTCACCGCAGTGGCCGATCTCAAGAACACCGACGTGCTGCCGTCCCTGTTGCTCAACACCCGCCTGACCGACAACCAGAA
CCTGCGCTTCGGTATCACGCGCACGCTGGCCCGCCCGGAATACCGTGAACTCGCGCCGGTGACGTTCCGCGACGTGCTGG
GCGGCGTGTCGGTGACGGGCAACGACAAGCTCGTGCGCTCGCTGATCGACAACTACGACCTGCGTTGGGAAGCCTTCCCG
ACACCGGGCGAAGTGTTCAGCATCGGCGTGTTTGCGAAGCGCTTCGATCGTCCGATCGAACGCGTGGAATCGGCCACGTC
GGGCGCGTACCAGGCGCGTTTCCAGAACGCCCTGCAGGCCGTGAACCTCGGCGTCGAACTCGAAGCCCGGAAGTCGCTGG
CGATGTTTGGTGAATGGGCCGCACCGTTCACCGCCTTCAGCAACGTGACCCTGATGCGTTCGTCGGTGGACCTCGACACG
CTGCAGGGCCTCACCGTCACCGACAAGACGCGCCGCCTGGTGGGTCAGGCGCCGTATGTGGTGAACGCCGGTCTCTCGTA
TTCGAACCTGTCGGGCAGCACCAATGCCACCGTGTTGTACAACGTGGTCGGTGAGCGCATCTACGCCGCCGGTGTGTTGC
CACTGCCGAACATTGTCGAGATGCCACGCCATGTGGTGGACATGTCGTTGCGCTTCCCGGTGTGGGGCAGCCTGACCGGT
CGGGTGGACGCCCGCAACATCCTCGATGCGCGCTACCGCTTCATGCAGGGCAACCTCGAGCGCGAAGGCTACAACGCCGG
CCGCAACTTCTCGATGGGCTTCTCCTGGCGTCAGTAA

Upstream 100 bases:

>100_bases
GCGTCGGTCGACCGACCGCGTCGCTCAGTTTGTCTCCTCTGTCTCCACGTATCTCATGCGGACCAAGGCTTACGCACTGC
ACCGTGTTGCGCGTCATCTG

Downstream 100 bases:

>100_bases
GTCAGGCCGTGCCGTGATCACGCCCTGACGTGATCACGGAAAACGGTGCGGCTCATCACACGATCGATCACATGGCCCGG
CACGGTGACACAACCGTGAC

Product: TonB-dependent outer membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>918_residues
MLAITAAVVTTVVPTQLRSQAATAAPAADAQTGRLTGRIVDATTGQGITAAQIQIVGTGLGIQSGVDGRYTIVRVPAGTV
TLQVRRIGYGPKTITGLIVPANGTIEQDVSLSSADVQLAAVSVTATKEKGTVSEALNQQKNATNVVNAITAEQIARSPDS
DAAQAAQRVSGVTVQDGKYLQVRGLGERYTTASLNGARIPSPEPERKVVPLDLFPAGLLQDVTTSKTFTPDQPGDFAGAN
VNIRTREFPARRQINYTTSVGANNLVRGQTLPFAPRAGGELFGMASSSRRIPDAISQANFMSNIPQSVYNQMALEQRNVW
NATPRKGAMNGSFGASTGGNTILGRRVGYVLSANYGYSEEVRANERFAVGNQGPNNTVVPLTQVEGQTGRSSIQWGGIAN
FSTIVGKGNRFSLNTTATRSADNEARIDRGFDENLADSIARTTLRYVERSVATANLQGEHQLSERNKTAWSATYANTSRK
EPDRSDIVYSRDGTGKYSLLSSLDGARRLYFDLQENNATAQFDHTMNIGAIANQNVVKFGAYMRSTDRTAQAPIYAFLSR
ADESIRTQNPDVIFGAGQACANCSLINVQPIGQAGSYTASDRTTAGYLMTDWGLGSRVRVIAGARVEQADINVQSSTQGG
FTAVADLKNTDVLPSLLLNTRLTDNQNLRFGITRTLARPEYRELAPVTFRDVLGGVSVTGNDKLVRSLIDNYDLRWEAFP
TPGEVFSIGVFAKRFDRPIERVESATSGAYQARFQNALQAVNLGVELEARKSLAMFGEWAAPFTAFSNVTLMRSSVDLDT
LQGLTVTDKTRRLVGQAPYVVNAGLSYSNLSGSTNATVLYNVVGERIYAAGVLPLPNIVEMPRHVVDMSLRFPVWGSLTG
RVDARNILDARYRFMQGNLEREGYNAGRNFSMGFSWRQ

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA