Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

Click here to switch to the map view.

The map label for this gene is dnaE

Identifier: 226226143

GI number:

Start: 870903

End: 874400

Strand: Reverse

Name: dnaE

Synonym: GAU_0737

Alternate gene names: NA

Gene position: NA

Preceding gene: 226226145

Following gene: 226226142

Centisome position: NA

GC content: NA

Gene sequence:

>3498_bases
ATGTCGTTCGTCCACCTGCACTGCCACTCCGAGTATTCGCTCCTCGACGGCGCGAATCGTATCGATGATCTGATCAAACG
CGCGCAGCACTTCGAGATGCCTGCGCTCGCGATCACCGATCACGGTAACATGCACGCCGCCTGGGAGTTCCAGGAAAAGG
CGCGCAAGGCCGGCATCAAGCCCATCCTCGGGATGGAAGCCTATGTCGCGCCAGGCGATCGCCGCCAGCGCGGGCGTCCC
GCCCCCGGGGTCAAGCCGTACTACCACCTCGTGCTGCTGGCCCGCGACATCGTGGGCTACCGCAATCTCGTCAAGCTCAC
CTCCCTCGGATACACCGAAGGCTTCTACACGAAGCCCCGGATCGACCGTGAGCTGCTCGCCCAGTATTCCGAAGGGTTGA
TCGTTTCGTCGGCCTGCCTGGCTGGTGAAGTCGCGTCACACCTCATGGAAGACCGCGTCGATCAGGCGCGGGAGGCCGCG
GCGTGGTATGCGGAGCTCTTCAAGGGGCGCTATCACCTCGAGGTGCAGGCGCACACCAGCGAAGGACAGGCGATCCTCAA
TGCGAAGATCCTGTCGCTCGCTGACGAGTTGAGCCTGCCGGTGGTGGCCACGAACGACGCGCACTTCCTCAAGCACGAGG
ATCACGACGCGCACGACGTGCTGCTGTGCATCGGCCTGGGCAAGGATCGCAACGACCGCGATCGCATGAAGTACGACGAT
GGATTGTACTTCAAGGCCCCCGATGAGATCCGCACGTTTTTCCCGGGTCGTGAGGACGTGCTCACGAACACGCTGGCCAT
CGCCGATGCGGTGGACGTGCAGTTCGCGAAGAAGTACTACGTGCCGTCGTTCCCGCTGCCCGAAGGGGTGGCGACCGAGA
ACGACATGCTCGTGCAGATCGCCACGGACGGTGCGAAGGAACGTTATGGCGATCCGCTGCCGGCCAATGTGCAGGAGCGA
CTCGACTACGAGTTGGGCGTCATCACGAAGACCGGGTATGCCGGCTACTTCCTGATCACGGCCGATTTCATCAAGGCGGC
GCGTGATCGTGGCATTCCGGTTGGCCCGGGCCGCGGTTCTGCGGCAGGCTCGCTGGTCGCCTATGCGACCCGCATCACCG
ACGTCTGCCCGCTCGAATTCGACCTGCTGTTCGAACGCTTCCTGAACCCCGAACGCGTGTCCATGCCCGACGTGGACGTG
GACTTCTGCTTCGAGCGGCGCGGGGAAGTGATCGAGTACGTGCGGCAGAAGTACGGCAAGGACAGCGTTGGGCAGATCGT
CACGTTCGGCACCATGAAGTCGCGTGCCGCCATCAAGGATGTGGGGCGCACCTTGGGCTTCACGCCAGCGGAAACGGACG
CGCTGGCCAAGCTGATCCCGAACGCACCAAACTTCTCGCTCACCGTCAAGGAAGCGATCGAGCAGGTGCCGGAAGTAAAG
GCGTTCTACAAGAACGACGAACGCTACCGGCAGTTGCTCGACTTCGCGGTCAAGCTCGAAGGTCTCTCACGGCACACCGG
TGTGCACGCCGCCGGCGTGGTGATCGCGCCGGGTCCGCTCGACGAGTTCGTCCCCATCTGCACGCAGGCCTCCAAGGGAG
CCGGCGGCGATGGTGACGAGCGGGTGATCGTCACGCAGTACGACATGACGGCGCTCGAAAAGGCCGGCATGCTCAAGATG
GACTTCCTCGGCCTCACCACACTCACCGTCATCACCGACACGCTCCGCAACATCAAGGAGCGACTCGGCAAGGACGTGGT
GCTGGAAGAGCGCGGCTTCACCGACGAAAAAACGTACCAGGTGTTGCGTGCCGGCCGTACCGGCGGCGTGTTCCAGTTCG
AATCGCCACTGGCCACGGACGTGCTCAAGCGCATGCGCTGCGACCGATTCGACGACTTGGTCGCCTCGAACGCGCTGCTA
CGTCCCGGCCCGCTCGATGCCGGCATGCACAACGTGTACATCCGGCGCAAGCGCGGCGAAGAGCCCACGGTGTACGCGCT
GCCCGAACTCGAACCCATCCTCTCCAACACCTACGGCGTCATCACCTATCAGGAACAGGTGATGCGTATTGCCCAGGTGC
TGGCCGGCATTTCGCTGGCCGAAGCCGACGTGCTGCGAAAGGCCGTGGGCAAGAAGGACGCGGAGCTCATCAAAAAGGAG
CTCGGCAAGTTCACCGAGAAGGCGATCGCGCGCGGCTACAGCAAGAAGATCATCGAAGAGCTCGCGGGACAGATCGAAAC
GTTCGGGCGGTACGGCTTCAACAAGAGTCACTCGGTGGCGTACTCGGTGGTTGCCTACCACACCGCGTACCTCAAGACAC
ACTACCCGGCCGAGTTCATGGCGGCACTGCTGTCGTCGAACATCGGGAAGACGGAAGAAGTGATCAAGTACATCGCCGAA
GCCCGGGAAATGGGTATCGAGGTGCTGGCGCCCGATGTGAATGAATCGGGCTGGCGCTTCACGGTCATCGGCGACAAACG
CATCCGCTTCGGGCTCGGCGCCATTCGCAACGTGGGCAAGGGCGCGATCGATTCCCTGCTGGCGGCGCGCACCGAAGGCG
CCTTCCCCACCCTGCATGACCTGTGCGGGCGTGTCGACCTGCGCCTGTGCAACAAGCGTGTGTTCGAAGCCCTCGTGGCC
GCGGGTGCCTGTGATACGCTGGGTGGACACCGCGCCCAGCTACTGGGGGCGCTCGACCACGCCATCAGCGAAGCGTCCTT
GCAGCAGGAAGAAGCGGAACGGGGACAGGGCTCGCTGTTTGGGGACCTCATGGGCGACGCCCCCGGCAATGGCGGAGGGA
ACAACGCCGCCCCGCAGATGCTTCCCAACATCGCCATGTGGTCGGAAAGCGAGCGGCTGCAACGGGAAAAGGAGCTGCTC
GGCTTCTACATCTCGGGCCATCCGCTCGAGCCACACCGAACAGAGTGCGAACTCTTTGCCACCAGCACCGTGGCGAAGCT
CGGTACCTGGACGGCAGAGCCGGTGACCATCGGTGTGGTGGTGACGGCAATCCGTAAACAGATCTCCAAACGCACCGGAG
CGGAGTTCGCCCGGTTGACAGTCGAGGATTTTTCCGGATCTTCTGAGGTGCTGGTGTTTCCGGAAGCGTGGGGGGTGATT
GCCGAACGTGTGCGCCCCGACGTGCCACTGCTGCTCAAGGGTGGCTACTCCAGGAAGGATCAGGACGTCGAAGGCGCTAC
TTTCATCGTGAACGAGGTCACGCGCTTCGCGGAGCTGCGGGCCAGCGGTGATGTGGCGGTGGCAATCGATCTGGGCGTCA
GCCTGGATCTATCGCCGGCGATGATGGATGATGTCCGTGCCAAGGTGGAGTCCCATGAAGGGTCTGCTCCGCTGGAAGTG
CGGTGGCTGGATGGCAACGGCAAGGTGGTCCGTTTCCGGTCCAAGTCACTCAGGGTCACGGCATCACCGGCAATTCTCTC
GGATCTTCGCGCGCTGCTTGGCGCCGACCGTGTGCGCCTCGTGCGCACCGGTGGCTGA

Upstream 100 bases:

>100_bases
GGGCGCCAGCGATGCGGCGAGCCCAGCGCCTCCAGGTGGTGTGTCCCGTCCCTGACAAGTCCTGCCGTCCGTTCTCCTGC
TGCGATATCATTCGGGATCC

Downstream 100 bases:

>100_bases
CGAGCAACGCGTCACCTTTTCAGGACGATTATGGCTGCTGCCCCGGTTCTCGAGTTCGAGCGTCCCATTGCGGATCTCGA
AAAGCAGATCGAGGAGCTGA

Product: DNA polymerase III alpha subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1165_residues
MSFVHLHCHSEYSLLDGANRIDDLIKRAQHFEMPALAITDHGNMHAAWEFQEKARKAGIKPILGMEAYVAPGDRRQRGRP
APGVKPYYHLVLLARDIVGYRNLVKLTSLGYTEGFYTKPRIDRELLAQYSEGLIVSSACLAGEVASHLMEDRVDQAREAA
AWYAELFKGRYHLEVQAHTSEGQAILNAKILSLADELSLPVVATNDAHFLKHEDHDAHDVLLCIGLGKDRNDRDRMKYDD
GLYFKAPDEIRTFFPGREDVLTNTLAIADAVDVQFAKKYYVPSFPLPEGVATENDMLVQIATDGAKERYGDPLPANVQER
LDYELGVITKTGYAGYFLITADFIKAARDRGIPVGPGRGSAAGSLVAYATRITDVCPLEFDLLFERFLNPERVSMPDVDV
DFCFERRGEVIEYVRQKYGKDSVGQIVTFGTMKSRAAIKDVGRTLGFTPAETDALAKLIPNAPNFSLTVKEAIEQVPEVK
AFYKNDERYRQLLDFAVKLEGLSRHTGVHAAGVVIAPGPLDEFVPICTQASKGAGGDGDERVIVTQYDMTALEKAGMLKM
DFLGLTTLTVITDTLRNIKERLGKDVVLEERGFTDEKTYQVLRAGRTGGVFQFESPLATDVLKRMRCDRFDDLVASNALL
RPGPLDAGMHNVYIRRKRGEEPTVYALPELEPILSNTYGVITYQEQVMRIAQVLAGISLAEADVLRKAVGKKDAELIKKE
LGKFTEKAIARGYSKKIIEELAGQIETFGRYGFNKSHSVAYSVVAYHTAYLKTHYPAEFMAALLSSNIGKTEEVIKYIAE
AREMGIEVLAPDVNESGWRFTVIGDKRIRFGLGAIRNVGKGAIDSLLAARTEGAFPTLHDLCGRVDLRLCNKRVFEALVA
AGACDTLGGHRAQLLGALDHAISEASLQQEEAERGQGSLFGDLMGDAPGNGGGNNAAPQMLPNIAMWSESERLQREKELL
GFYISGHPLEPHRTECELFATSTVAKLGTWTAEPVTIGVVVTAIRKQISKRTGAEFARLTVEDFSGSSEVLVFPEAWGVI
AERVRPDVPLLLKGGYSRKDQDVEGATFIVNEVTRFAELRASGDVAVAIDLGVSLDLSPAMMDDVRAKVESHEGSAPLEV
RWLDGNGKVVRFRSKSLRVTASPAILSDLRALLGADRVRLVRTGG

Sequences:
NA

Specific function: NA

COG id: COG0587

COG function: function code L; DNA polymerase III, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA