Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

Click here to switch to the map view.

The map label for this gene is hsdS

Identifier: 226225586

GI number:

Start: 214397

End: 215734

Strand: Reverse

Name: hsdS

Synonym: GAU_0180

Alternate gene names: NA

Gene position: NA

Preceding gene: 226225587

Following gene: 226225585

Centisome position: NA

GC content: NA

Gene sequence:

>1338_bases
ATGGGAGGTGAGTGGCGCGAGTGCTCGCTCGGTGAATTGATCGATATTAAGCACGGATTCGCATTTCAAGGCGAGTTTAT
CCGCGATGAGTCACGTGGCGACATCTTGCTTACGCCGGGCAACTTCTCGATAGGCGGTGGATTCAAGAGCGATAAATTCA
AGTATTTCGACGGCCCGGTACCTGGGGACTTCGTTCTTGCTGAGGCTGACCTGCTAGTAACTATGACGGACCTCAGCAAA
CAGTCCGACACGCTTGGTTTGCCTGCTTTCGTTCCTGCACGATCCGATGGCCGGAGATACCTGCACAACCAGCGACTCGG
CAAGATCCTCGTGAAGGATCAGCAAGCAATCGACAGCAGGTTCCTTCACTACCTCTTGTGCAGCGCTGACTATCGGAATG
AAGTTCTCGCTAGCGCTACTGGCACTACAGTAAAGCACACATCACCTGAACGGATAAAGCGCTTCAGGTTCTCCCGACCG
CTGCTAGACGAACAACGCGCCATCGCCCACATCCTCGGCACGCTCGACGATAAGATCGAGCTGAACCGACGCATGAGCGA
AACGCTGGAGGAAATGGCGCGCGCGCTCTTCAAGTCGTGGTTCGTGGATTTCGATCCCGTTCGCGCCAAGGCTGACGGTC
GTCATCATTGTCTTCCTCAGCCAATCGCAGAGCTATTCCCCGATTCGTTCGAAGGTTCGGAGATGGGAGAGATCCCGAAC
AATTGGGAACTCAAGACGATTGGAGATCTCGCGGATGTTGTTGGCGGTGGTACTCCCAGCACGAAGGAGCCAACATTTTG
GGAAGACGGCACCCACGCCTGGGCCACTCCCAAAGATCTGTCGGGACTCTCTGTTCCTGTTCTGCTCGAAACGGAGCGTT
ACGTAACTAGTCTTGGTCTCTCGCAGATCGGCTCGGGACTGCTCCCTCGCGGAACCGTTCTGCTGTCCTCGCGTGCACCA
ATTGGTTATTTGGCTGTAGCCGAGACTCCGGTTGCCATCAATCAGGGCTTCATCGCGATGAAGCCAAAGGCAGGGGTATC
GAACTTGTTCCTCCTACTTTGGGCGAGTTTCGCGCATGATCAGATTGTCAGCCGCGCGAATGGCTCGACATTTCTCGAGA
TCAGCAAGGCAAATTTTCGCCCTATTCCCATGGTCGCTCCTCGTGCGTGTATCATGGACGCATTCGACCGACTTGCGCGA
CCACTTTATGAGCGAATCGTGGCATGCGCAAAGGCGTCGCGCACATTGACAGCCCTCCGCGACACCCTGCTCCCCAAACT
CATCTCCGGCGAGCTTCGTGTGAAAGACGCCGAGCGATTCGTCGGCGTAGCTTTGTAG

Upstream 100 bases:

>100_bases
GAGCTGAAGATGCGGCGGCTATCTGCGCAATTGCACGAACAACAGATCGAGTCGGCTGATCTCGACGCTTCAATTCTCGC
CAACCTGAAGGAGCTTGGGT

Downstream 100 bases:

>100_bases
CAATGTCGTCGCCGGACCGTCTCCCCTTTCCCGATCGACAGCCTCTTCCACTCCCGCATAGGACCATCGATGAGCGCCAT
TGAACTCCTCGAGAGCCTGA

Product: type I restriction-modification system restriction subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>445_residues
MGGEWRECSLGELIDIKHGFAFQGEFIRDESRGDILLTPGNFSIGGGFKSDKFKYFDGPVPGDFVLAEADLLVTMTDLSK
QSDTLGLPAFVPARSDGRRYLHNQRLGKILVKDQQAIDSRFLHYLLCSADYRNEVLASATGTTVKHTSPERIKRFRFSRP
LLDEQRAIAHILGTLDDKIELNRRMSETLEEMARALFKSWFVDFDPVRAKADGRHHCLPQPIAELFPDSFEGSEMGEIPN
NWELKTIGDLADVVGGGTPSTKEPTFWEDGTHAWATPKDLSGLSVPVLLETERYVTSLGLSQIGSGLLPRGTVLLSSRAP
IGYLAVAETPVAINQGFIAMKPKAGVSNLFLLLWASFAHDQIVSRANGSTFLEISKANFRPIPMVAPRACIMDAFDRLAR
PLYERIVACAKASRTLTALRDTLLPKLISGELRVKDAERFVGVAL

Sequences:
NA

Specific function: NA

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA