Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

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The map label for this gene is hsdR

Identifier: 226225494

GI number:

Start: 103251

End: 106322

Strand: Reverse

Name: hsdR

Synonym: GAU_0088

Alternate gene names: NA

Gene position: NA

Preceding gene: 226225495

Following gene: 226225493

Centisome position: NA

GC content: NA

Gene sequence:

>3072_bases
GTGCGCGCCTCCTCTGATAAGAACTACCCACTCGACGGCGCCAGTCCCAAGGCAGTCCGTGAGGGCACAATCGAACAAGG
ATTCATCGGCACGCTTGAAGGCCTGAAATACGAATACCGCCCGGATATCCGGGACCGCGCTGCGCTGGAGCGCAATTTCC
GAGAGAAGTTCGAGACCCTCAATCGCGTTCGTCTTACCGATAGCGAGTTCGCGCGCCTGCTCGACGAGATCGTCACCGCC
GATGTCTTCACCGCCGCGAAGACCCTGCGGGAGATCAATGCGTTTACCCGCGACGACGGCACGCCGCTAAACTACTCGCT
GGTGAACCTCAAGGACTGGTGCAAGAACTCCTTCGAGGTCATCAACCAGCTTCGCATCAATACGGACAACAGCCACCACC
GATACGACGTTCTGCTGCTCATCAACGGGGTGCCCTGCGTGCAGGTCGAACTCAAGACGCTCGGCATCAACCCGCGCCGC
GCGATGGAGCAGATCGTCGAGTACAAGAACGATCCCGGCAACGGTTACACGAAGACGCTGCTGTGCTTCCTCCAGCTCTT
CATCGTCAGCAATCGTCACCGCACCTGGTACTTCGCCAACAACAACACCCGCCACTTCGCGTTCAACGCCGACGAACGTT
TCCTGCCCATCTATGAGTTCGCCGACGAGGCGAACACGAAGATCACCCACCTCGACGACTTCGCCGCCCGTTTCCTCCAG
AAGTGCGCGCTGGGCAAGACCCTCAGCCGCTATATGGTGCTCATTCAGAGTGAGCAGAAGCTCATGATCATGCGGCCGTA
TCAGGTCTATGCCGTGCAGCAGATCATGCAGTGCATCGAGGACAACGCCGGCAACGGTTTCATCTGGCACACCACCGGCA
GTGGCAAGACGCTGACCTCATTCAAGGCGTCCACGCTGCTCAAGCAGAATGAGCACATTCACAAGTGCCTGTTCGTGGTG
GACCGCAAGGACCTCGATCGCCAGACGCGCGAGGAGTTCAACCGGTTCCAGGAAGGCAGCGTGGAAGAAAACACCAACAC
CGCTGCCCTCGTGCGTCGTCTGCGCTCGGAGGACTACGCCGACAAGGTGATTGTCACCACCATCCAGAAGCTCGGTCTCG
CGCTGGATGCCGACAGCAAGCGCAATCGGCAGCGCAAGCGGAACGATCAGCCCACGTTCAAGGAGCTCCTGGAGCCGCTG
CAGGACCAACGCATCGTCTTCATTTTCGACGAATGCCACCGTTCGCAGTTCGGCGAGAATCACCAGGCGATCAAGGAGTT
TTTCCCCAGGGCCCAGCTCTTTGGCTTTACCGGCACGCCGATCTTCGAAGAAAACGCCAGCCTGCAGAAGATCGAGGACA
CCACGGCCTCCATGCGCACCACGGAGGACCTGTTCCAGAAGCGGCTGCACGCCTACACCATCACGAACGCCATCGAGGAT
GGGAACGTCCTGCGCTTCCATGTGGACTACTTCAAGCCCAGGGAAGAGGCAGGAAAGAAGGCGCCCAGGCCAGGCGAAGG
CATCGCCAAGCGCGCGGTCATCGAGGCCATCCTGGCCAAGCATGACACCGCCACCGCCGGACGCCGCTTCAATGCCATTC
TCGCCACGGCGTCCATCAACGATGCCATCGAGTACTACGGCCTGTTCAAGGCCATGCAGGCGGAGCGGCAGGCCGCAGAC
CCCGAGCGGACGCCGCTCAACATTGCCTGCGTCTTTTCGCCGCCCGCCGACGGCGACCGGGATGTGCAGCAGATCCAGGA
AGATCTGCCGCAGGAAAAGCTCGACAACGAGCAGGACCCCGAGGGCAAGAAGGCCGCGCTGAAAGGCATTTTGGCCGAGT
ACAACGCGCGGTATGGCACGAATCACGCCATTGGTGAATTCGATCTGTACTACCAGGACGTGCAGAAGCGCATCAAGGAC
CAGCAGTGGCCGAATAGCGACTTCTCGCACGCGCAGAAGATCGATATCACCATCGTGGTGGACATGCTGCTGACCGGCTT
CGACTCCAAGTATCTCAACACCCTGTACGTCGACAAGAATCTGAAGCACCACGGACTCATTCAAGCCTTTTCGCGCACGA
ATCGTGTGCTGAACGGCAGCAAGCCGTACGGCAATATTCTCGACTTTCGCCAGCAGCAGGACGCCGTGGACGCCGCCATT
GCGCTGTTTTCCGGCGAACAGACCGGCGAGCAGGCGCGGGAAATCTGGCTGGTGGACAAGGCGCCGGTGGTCATCCAGAA
GCTGCAGGCCGCTGTGCAGCAGCTGGATAGTTTCATGAGGTCACAGGGCCTCGAGACCGCGCCCGAGGCAGTACCGAACC
TCAAGGGCGACGCCGCGCGGGCCGTGTTCATCGAGCGCTTCAAGGAAGTGCAGCGACTCAAGACGCAGCTCGACCAGTAC
ACCGACCTCACCGACGGCGACAAGGTTGCCATCGAGCAGGTGCTCCCCGATGCCCAGCATCGCGGTTTCAAGGGTGCGTA
TCTGGAGACGGCGCAGCGTCTGCGCGAGCAGCAGGGCAAGACCCGGGGCGATGACATGGCCGACTCCAAAGCCGCCGACC
AGCTCGATTTCGAGTTCGTGCTTTTCGCCTCGGCGGTCATCGACTACGACTACATCATGGGCCTCATTGCCCGGTACACG
GCGCAAGGGCCAAGCAAGTCAAAGATGACGCGCGATCAGTTGATAGGCCTCATCAGCTCGGATGCCAAGTTCATGGACGA
GCGTGAGGACATTGCTGAGTACATCGGCACACTCAAGGCGGGGGAGGCGTTGAACGAAACCGCCATCCGCGAGGGTTACA
CCCGCTTCAAGGTGGAGAAGAGCGTGGCGGAGGTTGCCGCTTTGGCAGAGAAGCACGGGCTCACCGCTGACGAGCTGCAA
AAATTTGTCGACGGTACGTTGGAGCGAATGATTTTTGATGCCGAACGACTTGGCGACTTGTTTGCCCCGCTGGACCTTGG
CTGGAAGGCGCGCAAGGACGCCGAACTCGACCTGATGGGGGAACTGTATCCGCTACTTACCAGACGTGCGCAGGTGCGCG
AGATCTCGGGGTTGAGTGCGTATGAGCAGTAA

Upstream 100 bases:

>100_bases
GCGCATCATTGCCAGCTGCAGACCGACGCATTTTCGACACGGTCGTCCTGATAGTCTACCCCTCGTTCTCGCTCGACGCG
CTTCATTCCAGGTGATACCC

Downstream 100 bases:

>100_bases
GAAGAAAGCCACCGCTGTGAAGAGCGACGGCAAGGCTGCGTTGGTTCCGAGGCTGCGGTTTCCGGAGTTTCGGGGTGCGG
AAGGCTGGAAATCCGTCACC

Product: type I restriction-modification system restriction subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1023_residues
MRASSDKNYPLDGASPKAVREGTIEQGFIGTLEGLKYEYRPDIRDRAALERNFREKFETLNRVRLTDSEFARLLDEIVTA
DVFTAAKTLREINAFTRDDGTPLNYSLVNLKDWCKNSFEVINQLRINTDNSHHRYDVLLLINGVPCVQVELKTLGINPRR
AMEQIVEYKNDPGNGYTKTLLCFLQLFIVSNRHRTWYFANNNTRHFAFNADERFLPIYEFADEANTKITHLDDFAARFLQ
KCALGKTLSRYMVLIQSEQKLMIMRPYQVYAVQQIMQCIEDNAGNGFIWHTTGSGKTLTSFKASTLLKQNEHIHKCLFVV
DRKDLDRQTREEFNRFQEGSVEENTNTAALVRRLRSEDYADKVIVTTIQKLGLALDADSKRNRQRKRNDQPTFKELLEPL
QDQRIVFIFDECHRSQFGENHQAIKEFFPRAQLFGFTGTPIFEENASLQKIEDTTASMRTTEDLFQKRLHAYTITNAIED
GNVLRFHVDYFKPREEAGKKAPRPGEGIAKRAVIEAILAKHDTATAGRRFNAILATASINDAIEYYGLFKAMQAERQAAD
PERTPLNIACVFSPPADGDRDVQQIQEDLPQEKLDNEQDPEGKKAALKGILAEYNARYGTNHAIGEFDLYYQDVQKRIKD
QQWPNSDFSHAQKIDITIVVDMLLTGFDSKYLNTLYVDKNLKHHGLIQAFSRTNRVLNGSKPYGNILDFRQQQDAVDAAI
ALFSGEQTGEQAREIWLVDKAPVVIQKLQAAVQQLDSFMRSQGLETAPEAVPNLKGDAARAVFIERFKEVQRLKTQLDQY
TDLTDGDKVAIEQVLPDAQHRGFKGAYLETAQRLREQQGKTRGDDMADSKAADQLDFEFVLFASAVIDYDYIMGLIARYT
AQGPSKSKMTRDQLIGLISSDAKFMDEREDIAEYIGTLKAGEALNETAIREGYTRFKVEKSVAEVAALAEKHGLTADELQ
KFVDGTLERMIFDAERLGDLFAPLDLGWKARKDAELDLMGELYPLLTRRAQVREISGLSAYEQ

Sequences:
NA

Specific function: NA

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA