| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225150
Identifier: 226225150
GI number: 226225150
Start: 2656871
End: 2657965
Strand: Reverse
Name: 226225150
Synonym: Lm4b_02571
Alternate gene names: NA
Gene position: 2657965-2656871 (Counterclockwise)
Preceding gene: 226225151
Following gene: 226225147
Centisome position: 91.25
GC content: 37.26
Gene sequence:
>1095_bases ATGCGTTCGTTAACTAACGCGGAAATAGCTCACAATAGATTACTTAATTCTGGACTACTACAATCTAAATTTTCCAGCGC AGAGGATGCAACTCGTGCGTTATTTGGTATTCAGTCGCAGTATCAACAATTTGGAGAGATTAGTTTATTTAATCGTGTAC CTAATTTAACCAAAGAAAACCTGCAAATGGCTTACGACGATAAAGGGATAATCAAAATCTGGGGGCAAAGAATGACTGTC CATATGTATACGCCGGATGATTGGTTTTATGTTCATGATGTTTATGCGAACAAAAACAATTGGTTAAGAAAGCACGCAGA CTCTCTAGGACGTGATTTGGATGAGATTTTAGTACAAATGGAAGAATTACTCCTGCGCGAAGATAAAGTGTCTAAAGAGT CCTTTGCGGCTTTACTAGGTAATGAAGCAAAAGAGCTGATGACATGGGGCGGGGTTTTTATTCAAGGGTCACTCGATGGC AAGTTGTTTTGTGTGCCAGAAAGTCCTAAAACAAAATTTTATAGTCATAGAAACCAAATTGATTCAGAAAGAGAAGATGC TTGGATAACTAACAAGCGCAGCAAGACAGGTCTTGAAACAATGATTGATCGTTATTTTAGTGCATTTGGGCCAGCGACTA TACAAGATTTCAAGCATTGGAGTGGTTTGCGAAATAGTGATTATATAGAAACGTTAGAAAAGTTACTTGAAAACTATATA TGCTATATCGGTGAAGATGGCAAGAACTATTATAGCAAAGCAAAAACGCAGGAAAATGTGGAGATGGGGTCGCCGCTTCT ATTAGGGAAGTTTGATCCGCTTTTCGTAAGTTACGCGAAAAAGAATTGGCTTGCGAGCGAAAAAGAAACGAGTCTAATCT GGCGCACCGCTGGGCAAATTGAAGCTGTCTTAATAATAAATGCTCAGTTTTTTGGAACGTGGAGATATAAAATATCGGGG GATAAAATAGTTTTTCAATTCTATCTTAGTAAAAAACTAACTAAAAAAGGACAAAAATTAGTAGAAAAAGAAGCGATAAA ACTAGCTGAATTCCTCCTTAAAAACTACCAAGGCAGCATTTTTGAACAAATTTAA
Upstream 100 bases:
>100_bases TTTGACCTGTTATCTATGTATAGCAGGTCTTTTTTTCTTGCCTTTATACTGGAAACCATCTATAGTAAATTCCAAAGATA AACAGTGGGAGGGACGGAGA
Downstream 100 bases:
>100_bases AAGAACCCCCGTCAGAACGGGGGTTCTTTTCTTATAAAAATGGCATTTCTGGAAAATAATCCAAAGGTAATTTGATACTG GTAGTGATATTTGATTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MRSLTNAEIAHNRLLNSGLLQSKFSSAEDATRALFGIQSQYQQFGEISLFNRVPNLTKENLQMAYDDKGIIKIWGQRMTV HMYTPDDWFYVHDVYANKNNWLRKHADSLGRDLDEILVQMEELLLREDKVSKESFAALLGNEAKELMTWGGVFIQGSLDG KLFCVPESPKTKFYSHRNQIDSEREDAWITNKRSKTGLETMIDRYFSAFGPATIQDFKHWSGLRNSDYIETLEKLLENYI CYIGEDGKNYYSKAKTQENVEMGSPLLLGKFDPLFVSYAKKNWLASEKETSLIWRTAGQIEAVLIINAQFFGTWRYKISG DKIVFQFYLSKKLTKKGQKLVEKEAIKLAEFLLKNYQGSIFEQI
Sequences:
>Translated_364_residues MRSLTNAEIAHNRLLNSGLLQSKFSSAEDATRALFGIQSQYQQFGEISLFNRVPNLTKENLQMAYDDKGIIKIWGQRMTV HMYTPDDWFYVHDVYANKNNWLRKHADSLGRDLDEILVQMEELLLREDKVSKESFAALLGNEAKELMTWGGVFIQGSLDG KLFCVPESPKTKFYSHRNQIDSEREDAWITNKRSKTGLETMIDRYFSAFGPATIQDFKHWSGLRNSDYIETLEKLLENYI CYIGEDGKNYYSKAKTQENVEMGSPLLLGKFDPLFVSYAKKNWLASEKETSLIWRTAGQIEAVLIINAQFFGTWRYKISG DKIVFQFYLSKKLTKKGQKLVEKEAIKLAEFLLKNYQGSIFEQI >Mature_364_residues MRSLTNAEIAHNRLLNSGLLQSKFSSAEDATRALFGIQSQYQQFGEISLFNRVPNLTKENLQMAYDDKGIIKIWGQRMTV HMYTPDDWFYVHDVYANKNNWLRKHADSLGRDLDEILVQMEELLLREDKVSKESFAALLGNEAKELMTWGGVFIQGSLDG KLFCVPESPKTKFYSHRNQIDSEREDAWITNKRSKTGLETMIDRYFSAFGPATIQDFKHWSGLRNSDYIETLEKLLENYI CYIGEDGKNYYSKAKTQENVEMGSPLLLGKFDPLFVSYAKKNWLASEKETSLIWRTAGQIEAVLIINAQFFGTWRYKISG DKIVFQFYLSKKLTKKGQKLVEKEAIKLAEFLLKNYQGSIFEQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42133; Mature: 42133
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLTNAEIAHNRLLNSGLLQSKFSSAEDATRALFGIQSQYQQFGEISLFNRVPNLTKEN CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHH LQMAYDDKGIIKIWGQRMTVHMYTPDDWFYVHDVYANKNNWLRKHADSLGRDLDEILVQM CEEEECCCCEEEEECCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHH EELLLREDKVSKESFAALLGNEAKELMTWGGVFIQGSLDGKLFCVPESPKTKFYSHRNQI HHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCEEEEECCCCEEEEECCCCCHHHHHHHHHC DSEREDAWITNKRSKTGLETMIDRYFSAFGPATIQDFKHWSGLRNSDYIETLEKLLENYI CCCHHCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHE CYIGEDGKNYYSKAKTQENVEMGSPLLLGKFDPLFVSYAKKNWLASEKETSLIWRTAGQI EEECCCCHHHHHHHCCCCCHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCE EAVLIINAQFFGTWRYKISGDKIVFQFYLSKKLTKKGQKLVEKEAIKLAEFLLKNYQGSI EEEEEEEEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FEQI HHCC >Mature Secondary Structure MRSLTNAEIAHNRLLNSGLLQSKFSSAEDATRALFGIQSQYQQFGEISLFNRVPNLTKEN CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHH LQMAYDDKGIIKIWGQRMTVHMYTPDDWFYVHDVYANKNNWLRKHADSLGRDLDEILVQM CEEEECCCCEEEEECCEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHH EELLLREDKVSKESFAALLGNEAKELMTWGGVFIQGSLDGKLFCVPESPKTKFYSHRNQI HHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCEEEEECCCCEEEEECCCCCHHHHHHHHHC DSEREDAWITNKRSKTGLETMIDRYFSAFGPATIQDFKHWSGLRNSDYIETLEKLLENYI CCCHHCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHE CYIGEDGKNYYSKAKTQENVEMGSPLLLGKFDPLFVSYAKKNWLASEKETSLIWRTAGQI EEECCCCHHHHHHHCCCCCHHCCCCEEEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCE EAVLIINAQFFGTWRYKISGDKIVFQFYLSKKLTKKGQKLVEKEAIKLAEFLLKNYQGSI EEEEEEEEEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FEQI HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA