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The map label for this gene is hrtB [H]

Identifier: 226225127

GI number: 226225127

Start: 2627789

End: 2628877

Strand: Reverse

Name: hrtB [H]

Synonym: Lm4b_02548

Alternate gene names: 226225127

Gene position: 2628877-2627789 (Counterclockwise)

Preceding gene: 226225128

Following gene: 226225126

Centisome position: 90.26

GC content: 41.32

Gene sequence:

>1089_bases
ATGTTTTTGGCATTAAGAGAATTAAAACACGCAAAATTACGCTATATTCTAATTGGATTAATTATGGTGTTAATCGCATG
GCTTGTTTTGTTTGTAACGGGACTTGCGAATGGACTTGCAAACGACAATGGGGCAGCCATTTCATCCAATAAAGCAACTT
ATTATGTTTTACAAAAAGACTCGGATAATCGCTTAACGAGGTCCAATTTAACCGCGTCCGAAACAGACAGCGTAGCGAAG
CAAGTGAAAAAATCAGAAAGCACCAACCTAGGCGTGCAAATGGGCACGATCACACCACCCAACAAAGATAAAAAAACAGA
CATTACTTATTTCGGTATAGATAAAACAGGCTTCATGAAACCGGCCATCACAGAAGGAACAGAGCCAGAGAAAACAAAAG
AAGTAGTAGCCGATATTTCTTTAAAAGAGTCTGGTTATAAATTAGGCAGCAAACTCAAAGATAGCGCAACAGGAGAAGAG
TTCACGATTACCGCCTTCACCAAAAATAACACATTTAGCCATTCACCGGTTATATTCGTCGGCTGGGATGCTTGGAAATT
AGTGCATCAAACGAACCAAGCAGCAGAAGGAGAATATAACGCCGTAGCGCTAGATGTTTCTGAAAGCACAGCTAAAAACC
TATCACTCGGCTCCATGGAACTTTCGTCTAGTAAAGAAGTGCTTCAAGGTATCCCTGGCTACTCAGAAGAACAAGGATCG
CTACTGATGATGATTGCCTTTTTGTTCGTCATCGCCGCATTTGTTCTAGCTGCTTTCTTTTACGTCATTACGATTCAAAA
AATCAACCAATTTGGGATTTTAAAAGCAGTTGGCGCACGAACAGCCTATTTAGGCCGAAGTATCGTTACCCAAGTTGTTT
TCCTATCAGTTGTCAGTTTGTTAATTGGTAATGGCTTAACATTCGGTCTTGCAGCAATTTTACCGGCGAGCATGCCATTT
ACACTTAGCCCGGTACTTGCAATCGGCTGTTCTGCCTTATTCCTTGTTGTAGCAGTCATTGGATCGATGTTATCACTCTA
TCGTGTAGCAAAAGTAGACGCGTTAGAAGCAATTGGGAGGGCAAACTAA

Upstream 100 bases:

>100_bases
AGTCAAACTACCAAAAAACTAAATTTGTAAAATCCGATTCACATTCCGTTTACAAAACTTCTTTAAACTAAGGATAAGAT
CTTAGAAGGAGTTGAACGGA

Downstream 100 bases:

>100_bases
TGACTTTAATGATGAAAAATATTTCTAAAAATTATCAGGATGGCGAGCAAGTCATCGAAGTATTGAAAAATGTATCTTTA
GAAGTGGCGCAAGGAGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MFLALRELKHAKLRYILIGLIMVLIAWLVLFVTGLANGLANDNGAAISSNKATYYVLQKDSDNRLTRSNLTASETDSVAK
QVKKSESTNLGVQMGTITPPNKDKKTDITYFGIDKTGFMKPAITEGTEPEKTKEVVADISLKESGYKLGSKLKDSATGEE
FTITAFTKNNTFSHSPVIFVGWDAWKLVHQTNQAAEGEYNAVALDVSESTAKNLSLGSMELSSSKEVLQGIPGYSEEQGS
LLMMIAFLFVIAAFVLAAFFYVITIQKINQFGILKAVGARTAYLGRSIVTQVVFLSVVSLLIGNGLTFGLAAILPASMPF
TLSPVLAIGCSALFLVVAVIGSMLSLYRVAKVDALEAIGRAN

Sequences:

>Translated_362_residues
MFLALRELKHAKLRYILIGLIMVLIAWLVLFVTGLANGLANDNGAAISSNKATYYVLQKDSDNRLTRSNLTASETDSVAK
QVKKSESTNLGVQMGTITPPNKDKKTDITYFGIDKTGFMKPAITEGTEPEKTKEVVADISLKESGYKLGSKLKDSATGEE
FTITAFTKNNTFSHSPVIFVGWDAWKLVHQTNQAAEGEYNAVALDVSESTAKNLSLGSMELSSSKEVLQGIPGYSEEQGS
LLMMIAFLFVIAAFVLAAFFYVITIQKINQFGILKAVGARTAYLGRSIVTQVVFLSVVSLLIGNGLTFGLAAILPASMPF
TLSPVLAIGCSALFLVVAVIGSMLSLYRVAKVDALEAIGRAN
>Mature_362_residues
MFLALRELKHAKLRYILIGLIMVLIAWLVLFVTGLANGLANDNGAAISSNKATYYVLQKDSDNRLTRSNLTASETDSVAK
QVKKSESTNLGVQMGTITPPNKDKKTDITYFGIDKTGFMKPAITEGTEPEKTKEVVADISLKESGYKLGSKLKDSATGEE
FTITAFTKNNTFSHSPVIFVGWDAWKLVHQTNQAAEGEYNAVALDVSESTAKNLSLGSMELSSSKEVLQGIPGYSEEQGS
LLMMIAFLFVIAAFVLAAFFYVITIQKINQFGILKAVGARTAYLGRSIVTQVVFLSVVSLLIGNGLTFGLAAILPASMPF
TLSPVLAIGCSALFLVVAVIGSMLSLYRVAKVDALEAIGRAN

Specific function: Part of the ABC transporter complex hrt involved in hemin import. Responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. HrtB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 38932; Mature: 38932

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLALRELKHAKLRYILIGLIMVLIAWLVLFVTGLANGLANDNGAAISSNKATYYVLQKD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEEEC
SDNRLTRSNLTASETDSVAKQVKKSESTNLGVQMGTITPPNKDKKTDITYFGIDKTGFMK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCC
PAITEGTEPEKTKEVVADISLKESGYKLGSKLKDSATGEEFTITAFTKNNTFSHSPVIFV
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEE
GWDAWKLVHQTNQAAEGEYNAVALDVSESTAKNLSLGSMELSSSKEVLQGIPGYSEEQGS
CCHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCCCEECCCHHHHHHCCCCCCCCCCC
LLMMIAFLFVIAAFVLAAFFYVITIQKINQFGILKAVGARTAYLGRSIVTQVVFLSVVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGNGLTFGLAAILPASMPFTLSPVLAIGCSALFLVVAVIGSMLSLYRVAKVDALEAIGR
HHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AN
CC
>Mature Secondary Structure
MFLALRELKHAKLRYILIGLIMVLIAWLVLFVTGLANGLANDNGAAISSNKATYYVLQKD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEEEC
SDNRLTRSNLTASETDSVAKQVKKSESTNLGVQMGTITPPNKDKKTDITYFGIDKTGFMK
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCCCC
PAITEGTEPEKTKEVVADISLKESGYKLGSKLKDSATGEEFTITAFTKNNTFSHSPVIFV
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEE
GWDAWKLVHQTNQAAEGEYNAVALDVSESTAKNLSLGSMELSSSKEVLQGIPGYSEEQGS
CCHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCCCEECCCHHHHHHCCCCCCCCCCC
LLMMIAFLFVIAAFVLAAFFYVITIQKINQFGILKAVGARTAYLGRSIVTQVVFLSVVSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGNGLTFGLAAILPASMPFTLSPVLAIGCSALFLVVAVIGSMLSLYRVAKVDALEAIGR
HHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA