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The map label for this gene is 226224991

Identifier: 226224991

GI number: 226224991

Start: 2481780

End: 2482841

Strand: Reverse

Name: 226224991

Synonym: Lm4b_02412

Alternate gene names: NA

Gene position: 2482841-2481780 (Counterclockwise)

Preceding gene: 226224992

Following gene: 226224990

Centisome position: 85.24

GC content: 34.18

Gene sequence:

>1062_bases
ATGAAAAATCTATTTAGACTATTCTTGGTATTTAGCATAGTTATTATCGGGGTTGTTTCTTTTCAAGCGATAGATGCAAG
TGCAAATGAGACAGATGTATATCCATTACCAGCCAGAATAATTGATGTTTTCCCAGATGAAAATTTAGCAGAAGATATGG
TGGAGAACTTTGGTAAAAAAGATGTGACAGATGTAATTACCCAAGATGATGTGGATGCGGTGACATCTCTAGGGTTGGGT
TATTTTACCAATTACCTCACAGATGAAGATTTACAAATGCTAGGAAATGCTTATTTTACCAATGTAAATAATATTATGAT
TTATCCTACACAAACCATGTTTACTGGCTTTCCTGATTTACCAACCTTGCCCAAATTAGATACTTTGAGAGCAGAAGGAA
ATCTATCAAGCGAGGTACTACCTGAAAACATTACAGTTCCCGATTATCAAAACTACCCAGAATTAAAGTATCTTGATCTT
AGTAATCGAACTATTGTTGGGGGCTTACCTAACTTTTCTAATATTCCTAAATTAGAAACCTTGTTGATGAGCAGTTGTGG
ACTAGCTTCGGAAGACGCTCCAGATTTTACAAACTTGAAAAATTTGCAGAAAGTAAATTTTCAAACGAACCAATTTAGAA
CAGAAATGACGGATTTCACTCATTTGGACAGTTTGGTAAGTATGGATTTAAGTTATAATTATTTAAATGTGTTGCCGCCT
ACTATTGTGGATAAAGTAATCGTACTAGGTCAAATCGGAACTTTGCCAGATCAAAATGTTGTTTTTGGTGAGGATACAAA
TATCACGCTACCAGTTTATACGCAACTAGATGATTTAGGTAGAATTAGTGGTTTTCAAGAAGTTTGGATTCGTGATTCAA
ATGAGAAGGAAATTTACAACGTGGCAAAAGTGGATTACGACGAAGTGACGAAGCAGATTATTGTGCCAACAAATAACCTT
GATAAAGGTGAATACACTATTGGAATTGATTTTAATGGAATAGAGCCTTATATAGAAGAAGGCGAAGTTATGAATTACTC
AGTAAAAATAACCATTAATTAA

Upstream 100 bases:

>100_bases
GAACGAGCATTCACATTGATAATGTAAGAGTTATGCCATCCGCAGAATAATATAGAAGGGCGGGGAATTTCCTCGTCCTT
TATAAATTGGAGGAGATAGG

Downstream 100 bases:

>100_bases
TGGAAAACTTGTGACATGCTAAATAATAGTTGCGCATTTGGCTATGTCACAAGTTTTTTCTGTTTGTAAAGCCTCGTTTT
TTCATGTATAATAACTACTG

Product: cell surface protein

Products: NA

Alternate protein names: InteRNAlin Protein; Cell Surface Protein InteRNAlin Protein; Cell Surface Protein InteRNAlin Proteins

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKNLFRLFLVFSIVIIGVVSFQAIDASANETDVYPLPARIIDVFPDENLAEDMVENFGKKDVTDVITQDDVDAVTSLGLG
YFTNYLTDEDLQMLGNAYFTNVNNIMIYPTQTMFTGFPDLPTLPKLDTLRAEGNLSSEVLPENITVPDYQNYPELKYLDL
SNRTIVGGLPNFSNIPKLETLLMSSCGLASEDAPDFTNLKNLQKVNFQTNQFRTEMTDFTHLDSLVSMDLSYNYLNVLPP
TIVDKVIVLGQIGTLPDQNVVFGEDTNITLPVYTQLDDLGRISGFQEVWIRDSNEKEIYNVAKVDYDEVTKQIIVPTNNL
DKGEYTIGIDFNGIEPYIEEGEVMNYSVKITIN

Sequences:

>Translated_353_residues
MKNLFRLFLVFSIVIIGVVSFQAIDASANETDVYPLPARIIDVFPDENLAEDMVENFGKKDVTDVITQDDVDAVTSLGLG
YFTNYLTDEDLQMLGNAYFTNVNNIMIYPTQTMFTGFPDLPTLPKLDTLRAEGNLSSEVLPENITVPDYQNYPELKYLDL
SNRTIVGGLPNFSNIPKLETLLMSSCGLASEDAPDFTNLKNLQKVNFQTNQFRTEMTDFTHLDSLVSMDLSYNYLNVLPP
TIVDKVIVLGQIGTLPDQNVVFGEDTNITLPVYTQLDDLGRISGFQEVWIRDSNEKEIYNVAKVDYDEVTKQIIVPTNNL
DKGEYTIGIDFNGIEPYIEEGEVMNYSVKITIN
>Mature_353_residues
MKNLFRLFLVFSIVIIGVVSFQAIDASANETDVYPLPARIIDVFPDENLAEDMVENFGKKDVTDVITQDDVDAVTSLGLG
YFTNYLTDEDLQMLGNAYFTNVNNIMIYPTQTMFTGFPDLPTLPKLDTLRAEGNLSSEVLPENITVPDYQNYPELKYLDL
SNRTIVGGLPNFSNIPKLETLLMSSCGLASEDAPDFTNLKNLQKVNFQTNQFRTEMTDFTHLDSLVSMDLSYNYLNVLPP
TIVDKVIVLGQIGTLPDQNVVFGEDTNITLPVYTQLDDLGRISGFQEVWIRDSNEKEIYNVAKVDYDEVTKQIIVPTNNL
DKGEYTIGIDFNGIEPYIEEGEVMNYSVKITIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39709; Mature: 39709

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLFRLFLVFSIVIIGVVSFQAIDASANETDVYPLPARIIDVFPDENLAEDMVENFGKK
CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEECCHHEEEECCCCCHHHHHHHHCCCC
DVTDVITQDDVDAVTSLGLGYFTNYLTDEDLQMLGNAYFTNVNNIMIYPTQTMFTGFPDL
CHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEECHHHHCCCCCC
PTLPKLDTLRAEGNLSSEVLPENITVPDYQNYPELKYLDLSNRTIVGGLPNFSNIPKLET
CCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCHHHH
LLMSSCGLASEDAPDFTNLKNLQKVNFQTNQFRTEMTDFTHLDSLVSMDLSYNYLNVLPP
HHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCH
TIVDKVIVLGQIGTLPDQNVVFGEDTNITLPVYTQLDDLGRISGFQEVWIRDSNEKEIYN
HHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHCCCEEEEEECCCCHHHHH
VAKVDYDEVTKQIIVPTNNLDKGEYTIGIDFNGIEPYIEEGEVMNYSVKITIN
HHCCCHHHHCCEEEECCCCCCCCCEEEEEEECCCCCHHCCCCEEEEEEEEEEC
>Mature Secondary Structure
MKNLFRLFLVFSIVIIGVVSFQAIDASANETDVYPLPARIIDVFPDENLAEDMVENFGKK
CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEECCHHEEEECCCCCHHHHHHHHCCCC
DVTDVITQDDVDAVTSLGLGYFTNYLTDEDLQMLGNAYFTNVNNIMIYPTQTMFTGFPDL
CHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEECHHHHCCCCCC
PTLPKLDTLRAEGNLSSEVLPENITVPDYQNYPELKYLDLSNRTIVGGLPNFSNIPKLET
CCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCCCHHHH
LLMSSCGLASEDAPDFTNLKNLQKVNFQTNQFRTEMTDFTHLDSLVSMDLSYNYLNVLPP
HHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCH
TIVDKVIVLGQIGTLPDQNVVFGEDTNITLPVYTQLDDLGRISGFQEVWIRDSNEKEIYN
HHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCHHHHHHHCCCEEEEEECCCCHHHHH
VAKVDYDEVTKQIIVPTNNLDKGEYTIGIDFNGIEPYIEEGEVMNYSVKITIN
HHCCCHHHHCCEEEECCCCCCCCCEEEEEEECCCCCHHCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA