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The map label for this gene is yobV [H]

Identifier: 226224988

GI number: 226224988

Start: 2478753

End: 2479649

Strand: Reverse

Name: yobV [H]

Synonym: Lm4b_02409

Alternate gene names: 226224988

Gene position: 2479649-2478753 (Counterclockwise)

Preceding gene: 226224989

Following gene: 226224987

Centisome position: 85.13

GC content: 39.02

Gene sequence:

>897_bases
GTGAAACTAGAACGGATTTTAGCAATACTAGTCATGATTTTGGAGCGAAAAGTGCTGGCAAGTGAGCTGGCTGAAAAATT
TGAAGTAAGCACAAGGACGATTTATCGCGATATGGATACGCTACTTTATGCGGGATTTCCAGTTGTTGCTTTGCCGGGAA
AAAACGGCGGGTTCACAATGCTCGATACATATAAGCTGGCGACATTTACTTTTTCGGAGGCGGAAAAACAGATTTTGCTG
GAGGCATTAGAGGCGCGTTCGGAGTTTATGCTGAATGATAGCCACGAGATTTTGCGAGAAAAAATCACGCTATTACAGAC
TGAAAAACCAACTAGTAAGCATATTTTCTTTGATTCAGCGACACAACATCGCCAGCAAATTGAAGCAGAAGTGAAACGAA
AAGTCGCCTATATCCAGAAAGCTTTTACGACAAATAAACAACTTAAAATTACGTATATCGCTATGAGTGGCGCGGAAACA
ACGCGGGAGATTTCGCCGCAAAAATTAAACTTGATGGATGGAAGTTGGTATTTAGAAGCCTATTGCCACAAAAGAGCAGC
GATTCGTCATTTTAAATTAACGCGAATAACTTCTTTGAAAGAAATAGGTAAATCGATTATGTACGTTGAAGAAACGGAGC
ACCAGCCTGCAGAAATGAAGAAAATTGTGTTGGAATTTCCGAAAAATCAGCTCGGGAAATTGTTGGATTATTTTTTGCAA
GAAGAAATGGAGACTGGAGACGATTATGTCCGTGTAAGCTTTTTCTATGATTTGGAGCGCAATATAATACCGTTTTTATT
GATGTTTGGAAGTGCCGTGAAAATTTTAGAACCTGCATCGCTTCAAAAAGACTACAAATCCGAAGTGGAAAAACTTTATT
TTAATTTGAATTGTTGA

Upstream 100 bases:

>100_bases
AAGGAATGATGCGAGAAGTTTTATCCATCACATATGCATGGGTTTTTGATCACTAATAGTGCATGGTATAATAAAGCTAA
AAGGTGTTGGAGGTTTTGGG

Downstream 100 bases:

>100_bases
CAGATAGTTGTCAGGTTTTGTTCGCTATAATGGTTTTAAAAGGAGGCGGCAAATAATGATTTTACAAGAAAATATAGAGA
TTTTTGGGAAAAAGATACGT

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYAGFPVVALPGKNGGFTMLDTYKLATFTFSEAEKQILL
EALEARSEFMLNDSHEILREKITLLQTEKPTSKHIFFDSATQHRQQIEAEVKRKVAYIQKAFTTNKQLKITYIAMSGAET
TREISPQKLNLMDGSWYLEAYCHKRAAIRHFKLTRITSLKEIGKSIMYVEETEHQPAEMKKIVLEFPKNQLGKLLDYFLQ
EEMETGDDYVRVSFFYDLERNIIPFLLMFGSAVKILEPASLQKDYKSEVEKLYFNLNC

Sequences:

>Translated_298_residues
MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYAGFPVVALPGKNGGFTMLDTYKLATFTFSEAEKQILL
EALEARSEFMLNDSHEILREKITLLQTEKPTSKHIFFDSATQHRQQIEAEVKRKVAYIQKAFTTNKQLKITYIAMSGAET
TREISPQKLNLMDGSWYLEAYCHKRAAIRHFKLTRITSLKEIGKSIMYVEETEHQPAEMKKIVLEFPKNQLGKLLDYFLQ
EEMETGDDYVRVSFFYDLERNIIPFLLMFGSAVKILEPASLQKDYKSEVEKLYFNLNC
>Mature_298_residues
MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYAGFPVVALPGKNGGFTMLDTYKLATFTFSEAEKQILL
EALEARSEFMLNDSHEILREKITLLQTEKPTSKHIFFDSATQHRQQIEAEVKRKVAYIQKAFTTNKQLKITYIAMSGAET
TREISPQKLNLMDGSWYLEAYCHKRAAIRHFKLTRITSLKEIGKSIMYVEETEHQPAEMKKIVLEFPKNQLGKLLDYFLQ
EEMETGDDYVRVSFFYDLERNIIPFLLMFGSAVKILEPASLQKDYKSEVEKLYFNLNC

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 34661; Mature: 34661

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYAGFPVVALPGKNGGFTM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEE
LDTYKLATFTFSEAEKQILLEALEARSEFMLNDSHEILREKITLLQTEKPTSKHIFFDSA
EEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCH
TQHRQQIEAEVKRKVAYIQKAFTTNKQLKITYIAMSGAETTREISPQKLNLMDGSWYLEA
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHCCCCEEEEECCCHHHHH
YCHKRAAIRHFKLTRITSLKEIGKSIMYVEETEHQPAEMKKIVLEFPKNQLGKLLDYFLQ
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
EEMETGDDYVRVSFFYDLERNIIPFLLMFGSAVKILEPASLQKDYKSEVEKLYFNLNC
HHHCCCCCEEEEEEEEECHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYAGFPVVALPGKNGGFTM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEE
LDTYKLATFTFSEAEKQILLEALEARSEFMLNDSHEILREKITLLQTEKPTSKHIFFDSA
EEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCH
TQHRQQIEAEVKRKVAYIQKAFTTNKQLKITYIAMSGAETTREISPQKLNLMDGSWYLEA
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHCCCCEEEEECCCHHHHH
YCHKRAAIRHFKLTRITSLKEIGKSIMYVEETEHQPAEMKKIVLEFPKNQLGKLLDYFLQ
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
EEMETGDDYVRVSFFYDLERNIIPFLLMFGSAVKILEPASLQKDYKSEVEKLYFNLNC
HHHCCCCCEEEEEEEEECHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]