Click here to switch to the map view.

The map label for this gene is 226224971

Identifier: 226224971

GI number: 226224971

Start: 2465974

End: 2466282

Strand: Reverse

Name: 226224971

Synonym: Lm4b_02392

Alternate gene names: NA

Gene position: 2466282-2465974 (Counterclockwise)

Preceding gene: 226224972

Following gene: 226224970

Centisome position: 84.67

GC content: 41.1

Gene sequence:

>309_bases
CTGGAAATTTGGGAAAAAGAACGTTTGCGGACGGCGCAAAAAAACGGGGAGGACTTCGTTGTTTTCTTTTTTACTCCAAT
GTGTGGTAGCTGTCAAATAGCAAGCCGCCTTGTGGATGTGGTTTTAGAATCGGACGAGGTTCATACAGAAGTTGTGAAAG
TAGATTTAAATTATGTGCCTGATATTGCGCAAAATCTTGAAATTACATCAGTCCCGGCGCTAGTTAAATTTAAGAACGGT
CAACCGGCCGATTTAAGCTACCAATTACATGATGCAACGGCCATTTTTGAATTCCTGTATAGTGAGTAA

Upstream 100 bases:

>100_bases
TCTTTTATCAAGTGACGATTACGAAAAAGTATTAGATTAATTTTTAGGAGGCCGGCTTGGGATAACCGAAGCTGGTCTTT
TTTGATAGGAGGCGTTTTTC

Downstream 100 bases:

>100_bases
TACAGGGATTTTTTCTGTGTTAAATTTTGCCCTGGAGCAAAAAAGTTTCGCTCCCGATATAGAACTGTATTTAACTAAAA
ACGTTGCTATAGACACAATT

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEIWEKERLRTAQKNGEDFVVFFFTPMCGSCQIASRLVDVVLESDEVHTEVVKVDLNYVPDIAQNLEITSVPALVKFKNG
QPADLSYQLHDATAIFEFLYSE

Sequences:

>Translated_102_residues
MEIWEKERLRTAQKNGEDFVVFFFTPMCGSCQIASRLVDVVLESDEVHTEVVKVDLNYVPDIAQNLEITSVPALVKFKNG
QPADLSYQLHDATAIFEFLYSE
>Mature_102_residues
MEIWEKERLRTAQKNGEDFVVFFFTPMCGSCQIASRLVDVVLESDEVHTEVVKVDLNYVPDIAQNLEITSVPALVKFKNG
QPADLSYQLHDATAIFEFLYSE

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11629; Mature: 11629

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIWEKERLRTAQKNGEDFVVFFFTPMCGSCQIASRLVDVVLESDEVHTEVVKVDLNYVP
CCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
DIAQNLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE
HHHCCCEECCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MEIWEKERLRTAQKNGEDFVVFFFTPMCGSCQIASRLVDVVLESDEVHTEVVKVDLNYVP
CCCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCC
DIAQNLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE
HHHCCCEECCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA