| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yfmL [H]
Identifier: 226224325
GI number: 226224325
Start: 1770898
End: 1772226
Strand: Reverse
Name: yfmL [H]
Synonym: Lm4b_01736
Alternate gene names: 226224325
Gene position: 1772226-1770898 (Counterclockwise)
Preceding gene: 226224326
Following gene: 226224324
Centisome position: 60.84
GC content: 38.83
Gene sequence:
>1329_bases ATGACAGAATCAAATATCCCAAGCTTTTGGGCGGAAAAATGGCAAGAACATGGTTATGAAACGCCAACAGAAATTCAAAG CGCAATGTACCAACCAATCAAAGACGGTGCAGATGTACTTGCAGTATCACCAACTGGAACGGGGAAAACGGTGGCTTATG CACTGCCAACCCTTGAAAAAATAGAGGCAATTCCAAAAACACAATGGCTTGTTTTAGCGCCATCACATGAATTAGTTATG CAAATCACGGAAGTAATTCGTTCGTGGTTGCCAAGTGATGAACTCACAGTAATCTCTTTAATCGGAGGAGCCAATGTCAA ACGCCAAATCGAAAAATTAAAGAAAAAACCACAAATTATCGTAGCCTCTCCAGGGCGTGCACTTGAACTAATCAAACAAA AGAAAATTAAAATGCATGAAATTAAAACGATTACGTTGGACGAATGCGACCAATTACTTCGCCAAGAAAATTTTAAAAGC ACACTTGAGATTGTTGAAAGTGCTGTTCGCGATCGCCAATTGACACTTGTATCCGCGACAAAACTAGAAAATCCGGACAT GTTTTTTGCACAAACAGAAAACACACCAGTAATGCTAGAGGTAACAGCAAAACCAGAAGAATTAACGAATGTGGAACACC TATACATGGATGTGGAATCACGTGATAAAGCTACTTTACTGCGCCGTATTTCGCATATTAAAGACATGCGTGGCTTAGTT TTCGTAAAAGACAAACCACGAATGGAAATTTTGCTAGAAAAACTTCATTACGATAAAGTAAAAGCAGCTGGAATTCACGG CGAAATTCGCAAAGAAAAACGCAAAAAATATCTGGACGACTTTAAAAAAGGCACGTTGACTTATTTAATCGTGACAGATG TAGCGGCTCGTGGGCTAGACATAGAAGATTTACCTTACGTGATTCACTATGACTTAGCAGCAAGTGAAAAAGAGTACACG CACCGTTCTGGACGGACTGGACGAATGGGTAAATCAGGTACGGTTATTACTTTCGCTAACCCACGTGAAATAAGAACATT AAAACAATATTTAACTATCCACAACTTAAAAGGGAAGCAGGTTCGCTTTTATCAAGGGAAGCTTCTTGACGGCGCTGTTC CAGAAAACAAAATTGCCAAAAAAGCATCTAGACCACCAAAACAAGTTCAAAAAGGTAAAAAAGATGACGTGAAGAAACCA TTCCGTAAAGACAAACCAACGGAAACTGCTGGGAAACGTAAAGATAAACCAACTAACGCGTCTAAACCGACACGTAATAA TAAACCAAATAAATTTAACAAAAAACCAACTAATTTCAAAAGATCTTAA
Upstream 100 bases:
>100_bases TCTTGTTTACTTTTTTCTAGCAACAAAAATTCTAAATAAAAGTGCAGACTTGCAGTAAGCATGGTATGATACAGAGAAGA ACTAATAAAGGAGTCGGGTC
Downstream 100 bases:
>100_bases GATGCGTTGAATGTTTTTCTCTCTTGATAGATAGGAAAGCATTCGCGCTTTTTTTAGTTAATTTTTATCGTTGCGAGGAT GCTGTTTAAAAAGGTATAAT
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSPTGTGKTVAYALPTLEKIEAIPKTQWLVLAPSHELVM QITEVIRSWLPSDELTVISLIGGANVKRQIEKLKKKPQIIVASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKS TLEIVESAVRDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDVESRDKATLLRRISHIKDMRGLV FVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKKYLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYT HRSGRTGRMGKSGTVITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRPPKQVQKGKKDDVKKP FRKDKPTETAGKRKDKPTNASKPTRNNKPNKFNKKPTNFKRS
Sequences:
>Translated_442_residues MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSPTGTGKTVAYALPTLEKIEAIPKTQWLVLAPSHELVM QITEVIRSWLPSDELTVISLIGGANVKRQIEKLKKKPQIIVASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKS TLEIVESAVRDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDVESRDKATLLRRISHIKDMRGLV FVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKKYLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYT HRSGRTGRMGKSGTVITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRPPKQVQKGKKDDVKKP FRKDKPTETAGKRKDKPTNASKPTRNNKPNKFNKKPTNFKRS >Mature_441_residues TESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSPTGTGKTVAYALPTLEKIEAIPKTQWLVLAPSHELVMQ ITEVIRSWLPSDELTVISLIGGANVKRQIEKLKKKPQIIVASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKST LEIVESAVRDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDVESRDKATLLRRISHIKDMRGLVF VKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKKYLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYTH RSGRTGRMGKSGTVITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRPPKQVQKGKKDDVKKPF RKDKPTETAGKRKDKPTNASKPTRNNKPNKFNKKPTNFKRS
Specific function: Has A Helix-Destabilizing Activity. Plays A Key Role In Optimal Cell Growth At Low Temperature And Is Required For Normal Cell Division. Suppressor Of A Mutant Defective In Rpsb Gene For Ribosomal Protein S2. [C]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=32.2314049586777, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI148613856, Length=362, Percent_Identity=29.8342541436464, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI38201710, Length=362, Percent_Identity=29.8342541436464, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI188035877, Length=345, Percent_Identity=32.463768115942, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=29.8630136986301, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI7661920, Length=339, Percent_Identity=29.2035398230088, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=29.2134831460674, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI164664518, Length=344, Percent_Identity=30.2325581395349, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI87196351, Length=360, Percent_Identity=31.6666666666667, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI301171467, Length=360, Percent_Identity=31.6666666666667, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI301171475, Length=360, Percent_Identity=31.6666666666667, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI4503529, Length=361, Percent_Identity=30.4709141274238, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI83700235, Length=349, Percent_Identity=31.8051575931232, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI262118318, Length=365, Percent_Identity=28.7671232876712, Blast_Score=158, Evalue=8e-39, Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=28.7671232876712, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=28.7671232876712, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=28.7671232876712, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI169881239, Length=360, Percent_Identity=31.1111111111111, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI13514809, Length=360, Percent_Identity=31.1111111111111, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI164419743, Length=353, Percent_Identity=32.5779036827195, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI51094101, Length=353, Percent_Identity=32.5779036827195, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI222352149, Length=361, Percent_Identity=29.3628808864266, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI224593278, Length=360, Percent_Identity=31.9444444444444, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI31542656, Length=354, Percent_Identity=30.7909604519774, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI13129006, Length=342, Percent_Identity=28.9473684210526, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=27.9329608938547, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=27.9329608938547, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=28.5302593659942, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=29.0502793296089, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=28.2321899736148, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI21040371, Length=336, Percent_Identity=29.4642857142857, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI50659095, Length=358, Percent_Identity=29.608938547486, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI38327634, Length=354, Percent_Identity=30.5084745762712, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI41327776, Length=359, Percent_Identity=27.5766016713092, Blast_Score=139, Evalue=5e-33, Organism=Homo sapiens, GI4758112, Length=340, Percent_Identity=29.4117647058824, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI18375623, Length=340, Percent_Identity=29.4117647058824, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI13514831, Length=384, Percent_Identity=28.3854166666667, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI41327779, Length=355, Percent_Identity=30.4225352112676, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI38569505, Length=335, Percent_Identity=30.1492537313433, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI38569503, Length=350, Percent_Identity=29.7142857142857, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI6005743, Length=345, Percent_Identity=28.695652173913, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI62241022, Length=344, Percent_Identity=27.906976744186, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI164419732, Length=345, Percent_Identity=28.4057971014493, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI62241024, Length=320, Percent_Identity=29.375, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI8922886, Length=345, Percent_Identity=28.4057971014493, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI256223453, Length=335, Percent_Identity=27.4626865671642, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI256773275, Length=359, Percent_Identity=27.8551532033426, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI17505907, Length=383, Percent_Identity=26.1096605744125, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI9966805, Length=312, Percent_Identity=25.3205128205128, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI9506931, Length=376, Percent_Identity=26.5957446808511, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI4826686, Length=80, Percent_Identity=42.5, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI20336298, Length=200, Percent_Identity=29, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI87082221, Length=403, Percent_Identity=30.0248138957816, Blast_Score=185, Evalue=6e-48, Organism=Escherichia coli, GI1787016, Length=343, Percent_Identity=32.0699708454811, Blast_Score=177, Evalue=9e-46, Organism=Escherichia coli, GI1787605, Length=333, Percent_Identity=32.4324324324324, Blast_Score=175, Evalue=5e-45, Organism=Escherichia coli, GI1788930, Length=395, Percent_Identity=30.8860759493671, Blast_Score=165, Evalue=5e-42, Organism=Escherichia coli, GI1790214, Length=342, Percent_Identity=28.6549707602339, Blast_Score=127, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71987143, Length=340, Percent_Identity=29.7058823529412, Blast_Score=175, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17552114, Length=347, Percent_Identity=30.835734870317, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17510559, Length=371, Percent_Identity=30.4582210242588, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI115533224, Length=336, Percent_Identity=32.1428571428571, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17555296, Length=351, Percent_Identity=29.9145299145299, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71995724, Length=340, Percent_Identity=28.8235294117647, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17507121, Length=340, Percent_Identity=28.8235294117647, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI86570094, Length=337, Percent_Identity=29.673590504451, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI32565321, Length=375, Percent_Identity=28.2666666666667, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI115532546, Length=362, Percent_Identity=28.4530386740331, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI115532548, Length=362, Percent_Identity=28.4530386740331, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17537549, Length=344, Percent_Identity=28.4883720930233, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI71995718, Length=352, Percent_Identity=31.5340909090909, Blast_Score=151, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17505370, Length=351, Percent_Identity=31.3390313390313, Blast_Score=144, Evalue=6e-35, Organism=Caenorhabditis elegans, GI71999646, Length=380, Percent_Identity=29.2105263157895, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI71999644, Length=380, Percent_Identity=29.2105263157895, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17510307, Length=353, Percent_Identity=29.4617563739377, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17510309, Length=353, Percent_Identity=29.4617563739377, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17509811, Length=382, Percent_Identity=27.4869109947644, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71995514, Length=353, Percent_Identity=29.4617563739377, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI193208216, Length=365, Percent_Identity=27.3972602739726, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI71982858, Length=333, Percent_Identity=28.5285285285285, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17507945, Length=373, Percent_Identity=27.8820375335121, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17556951, Length=336, Percent_Identity=28.5714285714286, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17552642, Length=340, Percent_Identity=27.6470588235294, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI71990816, Length=356, Percent_Identity=27.8089887640449, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17507641, Length=391, Percent_Identity=27.3657289002558, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17507881, Length=390, Percent_Identity=27.1794871794872, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=27.0777479892761, Blast_Score=127, Evalue=9e-30, Organism=Caenorhabditis elegans, GI193206561, Length=333, Percent_Identity=24.3243243243243, Blast_Score=127, Evalue=9e-30, Organism=Caenorhabditis elegans, GI17507879, Length=373, Percent_Identity=27.0777479892761, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI71997889, Length=370, Percent_Identity=27.5675675675676, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=27.0557029177719, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17536099, Length=367, Percent_Identity=26.9754768392371, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17536101, Length=344, Percent_Identity=27.0348837209302, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17536103, Length=368, Percent_Identity=27.1739130434783, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=24.5454545454545, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI17553716, Length=339, Percent_Identity=25.6637168141593, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17508543, Length=387, Percent_Identity=25.5813953488372, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71982862, Length=171, Percent_Identity=29.8245614035088, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71987152, Length=85, Percent_Identity=37.6470588235294, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324217, Length=347, Percent_Identity=29.971181556196, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6320224, Length=349, Percent_Identity=29.512893982808, Blast_Score=167, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6321856, Length=368, Percent_Identity=30.7065217391304, Blast_Score=164, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6320041, Length=330, Percent_Identity=30, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6324778, Length=366, Percent_Identity=29.5081967213115, Blast_Score=156, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6320119, Length=346, Percent_Identity=30.0578034682081, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=29.1208791208791, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6323021, Length=339, Percent_Identity=30.6784660766962, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6323947, Length=392, Percent_Identity=29.3367346938776, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6322912, Length=336, Percent_Identity=29.7619047619048, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322323, Length=336, Percent_Identity=29.7619047619048, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6321111, Length=384, Percent_Identity=29.1666666666667, Blast_Score=145, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6321360, Length=340, Percent_Identity=29.4117647058824, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6324620, Length=369, Percent_Identity=29.5392953929539, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6321963, Length=347, Percent_Identity=31.9884726224784, Blast_Score=144, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6319714, Length=353, Percent_Identity=28.0453257790368, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6320449, Length=375, Percent_Identity=28.8, Blast_Score=136, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=26.9135802469136, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6322427, Length=348, Percent_Identity=29.0229885057471, Blast_Score=132, Evalue=7e-32, Organism=Saccharomyces cerevisiae, GI6319618, Length=423, Percent_Identity=27.8959810874704, Blast_Score=129, Evalue=7e-31, Organism=Saccharomyces cerevisiae, GI6321267, Length=421, Percent_Identity=28.5035629453682, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6323306, Length=400, Percent_Identity=24.75, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6320400, Length=372, Percent_Identity=26.6129032258064, Blast_Score=106, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6323844, Length=336, Percent_Identity=22.0238095238095, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI18857967, Length=369, Percent_Identity=30.6233062330623, Blast_Score=181, Evalue=7e-46, Organism=Drosophila melanogaster, GI24642151, Length=352, Percent_Identity=30.9659090909091, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24645031, Length=358, Percent_Identity=29.608938547486, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI21356161, Length=351, Percent_Identity=33.3333333333333, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=28.8571428571429, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI24584399, Length=361, Percent_Identity=28.2548476454294, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI21355075, Length=348, Percent_Identity=30.7471264367816, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI24644483, Length=353, Percent_Identity=29.4617563739377, Blast_Score=158, Evalue=9e-39, Organism=Drosophila melanogaster, GI24585582, Length=364, Percent_Identity=30.7692307692308, Blast_Score=157, Evalue=9e-39, Organism=Drosophila melanogaster, GI24644479, Length=353, Percent_Identity=29.4617563739377, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI281361218, Length=353, Percent_Identity=29.4617563739377, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24644481, Length=353, Percent_Identity=29.4617563739377, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24644487, Length=353, Percent_Identity=29.4617563739377, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI45551833, Length=353, Percent_Identity=29.4617563739377, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24644485, Length=353, Percent_Identity=29.4617563739377, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24583281, Length=328, Percent_Identity=31.0975609756098, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24583279, Length=328, Percent_Identity=31.0975609756098, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI17985987, Length=350, Percent_Identity=31.4285714285714, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI24584994, Length=378, Percent_Identity=29.1005291005291, Blast_Score=148, Evalue=8e-36, Organism=Drosophila melanogaster, GI17136814, Length=346, Percent_Identity=31.2138728323699, Blast_Score=147, Evalue=1e-35, Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=28.9972899728997, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24582080, Length=338, Percent_Identity=30.1775147928994, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24582078, Length=338, Percent_Identity=30.1775147928994, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI17136248, Length=338, Percent_Identity=30.1775147928994, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24582075, Length=338, Percent_Identity=30.1775147928994, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=27.7142857142857, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI28571808, Length=370, Percent_Identity=28.9189189189189, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI28571809, Length=370, Percent_Identity=28.9189189189189, Blast_Score=138, Evalue=9e-33, Organism=Drosophila melanogaster, GI21355559, Length=356, Percent_Identity=31.1797752808989, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI24581954, Length=334, Percent_Identity=30.2395209580838, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24581952, Length=334, Percent_Identity=30.2395209580838, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24581956, Length=334, Percent_Identity=30.2395209580838, Blast_Score=132, Evalue=4e-31, Organism=Drosophila melanogaster, GI24666101, Length=445, Percent_Identity=27.4157303370787, Blast_Score=132, Evalue=6e-31, Organism=Drosophila melanogaster, GI17977678, Length=339, Percent_Identity=27.4336283185841, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI17647335, Length=334, Percent_Identity=24.5508982035928, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=27.0096463022508, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24642822, Length=383, Percent_Identity=26.6318537859008, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI20130173, Length=323, Percent_Identity=27.8637770897833, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24643725, Length=368, Percent_Identity=26.0869565217391, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI19920478, Length=347, Percent_Identity=25.3602305475504, Blast_Score=100, Evalue=4e-21, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=27.2727272727273, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24640164, Length=367, Percent_Identity=23.1607629427793, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI18859659, Length=159, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI28571338, Length=159, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50431; Mature: 50300
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSPTGTGKTVAYALPTLEK CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCHHH IEAIPKTQWLVLAPSHELVMQITEVIRSWLPSDELTVISLIGGANVKRQIEKLKKKPQII HHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEE VASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKSTLEIVESAVRDRQLTLVSAT EECCCHHHHHHHHHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC KLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDVESRDKATLLRRISHIKDMRGLV CCCCCCEEEEECCCCCEEEEEECCCHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHCCEE FVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKKYLDDFKKGTLTYLIVTDVAARGLD EECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCC IEDLPYVIHYDLAASEKEYTHRSGRTGRMGKSGTVITFANPREIRTLKQYLTIHNLKGKQ CCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCE VRFYQGKLLDGAVPENKIAKKASRPPKQVQKGKKDDVKKPFRKDKPTETAGKRKDKPTNA EEEEECEECCCCCCHHHHHHHCCCCHHHHHCCCHHHHHCCHHCCCCCCHHCCCCCCCCCC SKPTRNNKPNKFNKKPTNFKRS CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSPTGTGKTVAYALPTLEK CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCHHH IEAIPKTQWLVLAPSHELVMQITEVIRSWLPSDELTVISLIGGANVKRQIEKLKKKPQII HHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCEE VASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKSTLEIVESAVRDRQLTLVSAT EECCCHHHHHHHHHCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC KLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDVESRDKATLLRRISHIKDMRGLV CCCCCCEEEEECCCCCEEEEEECCCHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHCCEE FVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKKYLDDFKKGTLTYLIVTDVAARGLD EECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCC IEDLPYVIHYDLAASEKEYTHRSGRTGRMGKSGTVITFANPREIRTLKQYLTIHNLKGKQ CCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCE VRFYQGKLLDGAVPENKIAKKASRPPKQVQKGKKDDVKKPFRKDKPTETAGKRKDKPTNA EEEEECEECCCCCCHHHHHHHCCCCHHHHHCCCHHHHHCCHHCCCCCCHHCCCCCCCCCC SKPTRNNKPNKFNKKPTNFKRS CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]