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The map label for this gene is ccdC [H]

Identifier: 226224250

GI number: 226224250

Start: 1681331

End: 1681819

Strand: Reverse

Name: ccdC [H]

Synonym: Lm4b_01660

Alternate gene names: 226224250

Gene position: 1681819-1681331 (Counterclockwise)

Preceding gene: 226224251

Following gene: 226224249

Centisome position: 57.74

GC content: 35.58

Gene sequence:

>489_bases
GTGTCATTAATCATTTCAATTATCATTACACTTGTTTTTGGAGCTGGAATTATCATGATAAGAATGAAAGCATCGAAGCG
TCCAGCAAGTGTGAAAGGGATTATCATACCACCAATTATGATGTCAACAGGCGCTCTCATGTTTGTTATTCCTTTTTTCC
GTGTTTCGTGGGTAGATATTTTAGAAGCTATAGCAATGGGGCTTGTGTTTTCTGTTATTTTAATTTGGACAACAAAATTC
GAAATTCGTCATAAGTACGTATTTATTAAACGTACAAAAGCTTTTCCAGTTATTTTGATGGGACTGTTACTCATTCGAAT
CTTCATCAAGTACTGGATTAGTGGTAGTCTGGAAGTGGGAGAGTTGTCTGGAATGTTCTGGATAATGGCGTTTGCGATGA
TTGTACCTTGGCGAATTGTGATGTATTTCCAATATAAAAATACCGAAAAAGAGCTTAATAAAGTAGAAGTTAGTGGAGAG
TACGAATAA

Upstream 100 bases:

>100_bases
ATTTAGACGAAGCACTTTAAGCAGAGAAGTTTATTTCAAACGGTAAAAGGAATATAATGAGGAGCGAAGTGTTACAGCAG
ATTAGTAGGGGGAATTAAAA

Downstream 100 bases:

>100_bases
TAGTGAAAGCATTTTCTAAAACAGCTTGAATTATTCCGTATGAATAGCTTATAATGAATAATGTTACATCGTGAGTAATG
TTACTTGCCGGATGGGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSLIISIIITLVFGAGIIMIRMKASKRPASVKGIIIPPIMMSTGALMFVIPFFRVSWVDILEAIAMGLVFSVILIWTTKF
EIRHKYVFIKRTKAFPVILMGLLLIRIFIKYWISGSLEVGELSGMFWIMAFAMIVPWRIVMYFQYKNTEKELNKVEVSGE
YE

Sequences:

>Translated_162_residues
MSLIISIIITLVFGAGIIMIRMKASKRPASVKGIIIPPIMMSTGALMFVIPFFRVSWVDILEAIAMGLVFSVILIWTTKF
EIRHKYVFIKRTKAFPVILMGLLLIRIFIKYWISGSLEVGELSGMFWIMAFAMIVPWRIVMYFQYKNTEKELNKVEVSGE
YE
>Mature_161_residues
SLIISIIITLVFGAGIIMIRMKASKRPASVKGIIIPPIMMSTGALMFVIPFFRVSWVDILEAIAMGLVFSVILIWTTKFE
IRHKYVFIKRTKAFPVILMGLLLIRIFIKYWISGSLEVGELSGMFWIMAFAMIVPWRIVMYFQYKNTEKELNKVEVSGEY
E

Specific function: Unknown

COG id: COG4846

COG function: function code O; Membrane protein involved in cytochrome C biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009916 [H]

Pfam domain/function: PF07301 DUF1453 [H]

EC number: NA

Molecular weight: Translated: 18651; Mature: 18520

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIISIIITLVFGAGIIMIRMKASKRPASVKGIIIPPIMMSTGALMFVIPFFRVSWVDI
CHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHH
LEAIAMGLVFSVILIWTTKFEIRHKYVFIKRTKAFPVILMGLLLIRIFIKYWISGSLEVG
HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHH
ELSGMFWIMAFAMIVPWRIVMYFQYKNTEKELNKVEVSGEYE
HHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHEEECCCCCC
>Mature Secondary Structure 
SLIISIIITLVFGAGIIMIRMKASKRPASVKGIIIPPIMMSTGALMFVIPFFRVSWVDI
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEECCHHHHCCHHHHHHHHHHHHHHHH
LEAIAMGLVFSVILIWTTKFEIRHKYVFIKRTKAFPVILMGLLLIRIFIKYWISGSLEVG
HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHH
ELSGMFWIMAFAMIVPWRIVMYFQYKNTEKELNKVEVSGEYE
HHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377 [H]