Click here to switch to the map view.

The map label for this gene is ysxB [H]

Identifier: 226224142

GI number: 226224142

Start: 1560108

End: 1560425

Strand: Reverse

Name: ysxB [H]

Synonym: Lm4b_01552

Alternate gene names: 226224142

Gene position: 1560425-1560108 (Counterclockwise)

Preceding gene: 226224143

Following gene: 226224141

Centisome position: 53.57

GC content: 40.57

Gene sequence:

>318_bases
ATGATTCAAGTCGATGTTATGCGAGAAGACAACCAAATAATTTCTTTTACAATGAGTGGACACGCCGATTTTGCCGAACA
TGGCAGTGATTTGGTATGTGCAGGAGCATCCTCTATTGCTTTTGGAATGGTGAATGCTATTTCGGAAGTACGTGATTTTG
AGCCTGTAATAGAAGAGTCGGAGGGTTACCTTTACTATTCTGTGCCTGCTGATTATGTCGGAGATGACGTGGTGCAAATC
TTGCTTACAGGGATGGAAAATCAACTAAGGTCATTAGCGTACAGCTATCCTGATCATATAAAAATTAACTCCAAATAG

Upstream 100 bases:

>100_bases
TAAACCGAAAAAGAACTACCACAAAAAACAAGGTCATCGTCAACCTTACACAAAATTAACTATTGATGCTATCAATGCTT
AATTTGAAAGGACGAAAACA

Downstream 100 bases:

>100_bases
GAGGTGGAATTTCATGTTAAAATTTGATATTCAACATTTTGCGCACAAAAAGGGTGGCGGTTCGACTTCTAACGGACGTG
ACTCTGAATCAAAACGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MIQVDVMREDNQIISFTMSGHADFAEHGSDLVCAGASSIAFGMVNAISEVRDFEPVIEESEGYLYYSVPADYVGDDVVQI
LLTGMENQLRSLAYSYPDHIKINSK

Sequences:

>Translated_105_residues
MIQVDVMREDNQIISFTMSGHADFAEHGSDLVCAGASSIAFGMVNAISEVRDFEPVIEESEGYLYYSVPADYVGDDVVQI
LLTGMENQLRSLAYSYPDHIKINSK
>Mature_105_residues
MIQVDVMREDNQIISFTMSGHADFAEHGSDLVCAGASSIAFGMVNAISEVRDFEPVIEESEGYLYYSVPADYVGDDVVQI
LLTGMENQLRSLAYSYPDHIKINSK

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG233 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007422 [H]

Pfam domain/function: PF04327 DUF464 [H]

EC number: NA

Molecular weight: Translated: 11627; Mature: 11627

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVDVMREDNQIISFTMSGHADFAEHGSDLVCAGASSIAFGMVNAISEVRDFEPVIEES
CEEEEEEECCCEEEEEEECCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCHHHCCC
EGYLYYSVPADYVGDDVVQILLTGMENQLRSLAYSYPDHIKINSK
CCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MIQVDVMREDNQIISFTMSGHADFAEHGSDLVCAGASSIAFGMVNAISEVRDFEPVIEES
CEEEEEEECCCEEEEEEECCCCCHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCHHHCCC
EGYLYYSVPADYVGDDVVQILLTGMENQLRSLAYSYPDHIKINSK
CCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 3918016 [H]