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The map label for this gene is yclI [H]

Identifier: 226224107

GI number: 226224107

Start: 1519845

End: 1521344

Strand: Reverse

Name: yclI [H]

Synonym: Lm4b_01516

Alternate gene names: 226224107

Gene position: 1521344-1519845 (Counterclockwise)

Preceding gene: 226224110

Following gene: 226224106

Centisome position: 52.23

GC content: 39.07

Gene sequence:

>1500_bases
ATGAATTTTTTTAAGAGAGCATGGCTCAGCATGAAAGCGAGAAAAGGAAGATCTGTTTTACAACTAATTATATTCACAGT
CGTCTGTGTACTTATTTTATCAGGTTTTACTATTCAATCGGCTGCAGATAAAGCGAGTGAGTTGGCGCGAGAACAGCTTG
GTGGTACAGTGACGCTAACTGTTGATCGAGAAAAACAAATGCAGACAATGCGAGACGAGGCTTCAAGCAGTGATAGTAGC
TCAACTGAATCCAAGCCGCAATTTCAAAGTAGTCCGATAGATGTTAGTGATGCTAATGATTTGGCAAAGTTAAATCATGT
AGCAAGTTACAATTATTATTCCAGTACACAAGCTTTAGCATCCGGATTTGATCCAATCGAGTCTTCCGGTGATACATCAT
CTTCGAGTGATGAATCATCCACTACAACCGAAACACAAGGACCAGGAGGCGGCCAAGGTGGACCGCAAATGGTAGATGCC
GATTTAAGCATTAGCGGCTTACTTGATTCTGCAACTAGCACTGATTTTGAAGCAGGAACTAGTGAGTTAACAAGTGGTGT
GGCAATTACTTCCGCTGATAAAGATAAAAATGTAGCTATGGTAGAAGAAAATTTAGCAGAAGAAAATGATTGGAAAGTTG
GCGATTCTTTTACTGTCACATCCAGTGATGGCAATACCAAAGTAACATTAAAGATTGTGGGTATTTATAAAACAACAGAT
TCTGGAAGTGATATGGCACAAAACTTCTCTTTCCTAAATCCTTATAATAAAGTATATGTTCCTTATACAGTAGCTAATAC
AATTAAGGGTTCCGATTATAAAAATACAGTAGACTCAGCTGTTTATACGATGGATGATGCGGCTAATATTTCTGCTTTTG
AAAAAGAAGCAAAAAAAGTTGATAGCATTGATTGGGATACATTTAAATTAGATGCCAATGATACGCTTTATCAACAAATG
ATTGGCCCGATTAATAGCGTAGCATCTTTCTCTAAAAATGTGGTTTATATTGTGAGTATTGCCGGAGCACTAATCTTAGG
CCTACTCGTGATGATGCAAGTGCGTGACCGTAAGTATGAAATGGGTGTACTTTTGGCAATTGGTGAAAAACGTGGCAAAT
TGATTGCGCAATTCTTTGTGGAAATTTTAATTGTAGCTCTAGTTTCCTTTGGCCTAGCCGCTGCAAGTAGTCACTATGTA
GCACAATTAGCGGGAAATCAATTATTGGCGCAACAAAATTCATCTACTACTGAAACAACAAGTTCGACAGAAAACCGTGG
TCCAGGTGGTGGACAAGGAGGTCCAGGTGGATTCGGTGAGAGCGTGAGCAACTTGACGAAGAACACCGAACAAATCAAAG
AATTAGACATTCAAGTAACATTAGAAGATATGCTGAAAATGGGCGGAATTGGTATCGGAATTGCCTTTATCTCAGTCCTT
TTACCAGCTGCACTCGTTCTTCGTATGAATCCAAAAACAATTCTAACTAAACAGGAGTAG

Upstream 100 bases:

>100_bases
TTTTTCGCGAAAGTTTAAAATATGCATCATAGTTTGTTCATACTTTCTTCATAACTCCCCAGTAATCTTAGTGGAGTAGA
AACCGAATGGAGGAAATCAC

Downstream 100 bases:

>100_bases
GTGACGATATGACCAAAGTATTAACGTTTGAAAATATTTCTTATTGGTATAAAACGAAAGAAGAATCCATTTTAAGTGAC
ATCAATTATGATTTTGAAGC

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MNFFKRAWLSMKARKGRSVLQLIIFTVVCVLILSGFTIQSAADKASELAREQLGGTVTLTVDREKQMQTMRDEASSSDSS
STESKPQFQSSPIDVSDANDLAKLNHVASYNYYSSTQALASGFDPIESSGDTSSSSDESSTTTETQGPGGGQGGPQMVDA
DLSISGLLDSATSTDFEAGTSELTSGVAITSADKDKNVAMVEENLAEENDWKVGDSFTVTSSDGNTKVTLKIVGIYKTTD
SGSDMAQNFSFLNPYNKVYVPYTVANTIKGSDYKNTVDSAVYTMDDAANISAFEKEAKKVDSIDWDTFKLDANDTLYQQM
IGPINSVASFSKNVVYIVSIAGALILGLLVMMQVRDRKYEMGVLLAIGEKRGKLIAQFFVEILIVALVSFGLAAASSHYV
AQLAGNQLLAQQNSSTTETTSSTENRGPGGGQGGPGGFGESVSNLTKNTEQIKELDIQVTLEDMLKMGGIGIGIAFISVL
LPAALVLRMNPKTILTKQE

Sequences:

>Translated_499_residues
MNFFKRAWLSMKARKGRSVLQLIIFTVVCVLILSGFTIQSAADKASELAREQLGGTVTLTVDREKQMQTMRDEASSSDSS
STESKPQFQSSPIDVSDANDLAKLNHVASYNYYSSTQALASGFDPIESSGDTSSSSDESSTTTETQGPGGGQGGPQMVDA
DLSISGLLDSATSTDFEAGTSELTSGVAITSADKDKNVAMVEENLAEENDWKVGDSFTVTSSDGNTKVTLKIVGIYKTTD
SGSDMAQNFSFLNPYNKVYVPYTVANTIKGSDYKNTVDSAVYTMDDAANISAFEKEAKKVDSIDWDTFKLDANDTLYQQM
IGPINSVASFSKNVVYIVSIAGALILGLLVMMQVRDRKYEMGVLLAIGEKRGKLIAQFFVEILIVALVSFGLAAASSHYV
AQLAGNQLLAQQNSSTTETTSSTENRGPGGGQGGPGGFGESVSNLTKNTEQIKELDIQVTLEDMLKMGGIGIGIAFISVL
LPAALVLRMNPKTILTKQE
>Mature_499_residues
MNFFKRAWLSMKARKGRSVLQLIIFTVVCVLILSGFTIQSAADKASELAREQLGGTVTLTVDREKQMQTMRDEASSSDSS
STESKPQFQSSPIDVSDANDLAKLNHVASYNYYSSTQALASGFDPIESSGDTSSSSDESSTTTETQGPGGGQGGPQMVDA
DLSISGLLDSATSTDFEAGTSELTSGVAITSADKDKNVAMVEENLAEENDWKVGDSFTVTSSDGNTKVTLKIVGIYKTTD
SGSDMAQNFSFLNPYNKVYVPYTVANTIKGSDYKNTVDSAVYTMDDAANISAFEKEAKKVDSIDWDTFKLDANDTLYQQM
IGPINSVASFSKNVVYIVSIAGALILGLLVMMQVRDRKYEMGVLLAIGEKRGKLIAQFFVEILIVALVSFGLAAASSHYV
AQLAGNQLLAQQNSSTTETTSSTENRGPGGGQGGPGGFGESVSNLTKNTEQIKELDIQVTLEDMLKMGGIGIGIAFISVL
LPAALVLRMNPKTILTKQE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 53269; Mature: 53269

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFKRAWLSMKARKGRSVLQLIIFTVVCVLILSGFTIQSAADKASELAREQLGGTVTLT
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEE
VDREKQMQTMRDEASSSDSSSTESKPQFQSSPIDVSDANDLAKLNHVASYNYYSSTQALA
ECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
SGFDPIESSGDTSSSSDESSTTTETQGPGGGQGGPQMVDADLSISGLLDSATSTDFEAGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCH
SELTSGVAITSADKDKNVAMVEENLAEENDWKVGDSFTVTSSDGNTKVTLKIVGIYKTTD
HHHHCCEEEEECCCCCCEEHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECC
SGSDMAQNFSFLNPYNKVYVPYTVANTIKGSDYKNTVDSAVYTMDDAANISAFEKEAKKV
CCHHHHHCCHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHH
DSIDWDTFKLDANDTLYQQMIGPINSVASFSKNVVYIVSIAGALILGLLVMMQVRDRKYE
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC
MGVLLAIGEKRGKLIAQFFVEILIVALVSFGLAAASSHYVAQLAGNQLLAQQNSSTTETT
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCCCCCCCC
SSTENRGPGGGQGGPGGFGESVSNLTKNTEQIKELDIQVTLEDMLKMGGIGIGIAFISVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHCCCHHHHHHHHHH
LPAALVLRMNPKTILTKQE
HHHHHHHCCCCCEEEECCC
>Mature Secondary Structure
MNFFKRAWLSMKARKGRSVLQLIIFTVVCVLILSGFTIQSAADKASELAREQLGGTVTLT
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEE
VDREKQMQTMRDEASSSDSSSTESKPQFQSSPIDVSDANDLAKLNHVASYNYYSSTQALA
ECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
SGFDPIESSGDTSSSSDESSTTTETQGPGGGQGGPQMVDADLSISGLLDSATSTDFEAGT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHCCCCCCCCCCCH
SELTSGVAITSADKDKNVAMVEENLAEENDWKVGDSFTVTSSDGNTKVTLKIVGIYKTTD
HHHHCCEEEEECCCCCCEEHHHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECC
SGSDMAQNFSFLNPYNKVYVPYTVANTIKGSDYKNTVDSAVYTMDDAANISAFEKEAKKV
CCHHHHHCCHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHH
DSIDWDTFKLDANDTLYQQMIGPINSVASFSKNVVYIVSIAGALILGLLVMMQVRDRKYE
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC
MGVLLAIGEKRGKLIAQFFVEILIVALVSFGLAAASSHYVAQLAGNQLLAQQNSSTTETT
CEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCCCCCCCCC
SSTENRGPGGGQGGPGGFGESVSNLTKNTEQIKELDIQVTLEDMLKMGGIGIGIAFISVL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHHHHCCCHHHHHHHHHH
LPAALVLRMNPKTILTKQE
HHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]