Click here to switch to the map view.

The map label for this gene is 226223935

Identifier: 226223935

GI number: 226223935

Start: 1346960

End: 1347316

Strand: Reverse

Name: 226223935

Synonym: Lm4b_01342

Alternate gene names: NA

Gene position: 1347316-1346960 (Counterclockwise)

Preceding gene: 226223942

Following gene: 226223934

Centisome position: 46.26

GC content: 33.61

Gene sequence:

>357_bases
ATGACCACAGTCATAATTATCTTACTAATTGCTGCTATTGCGCTGTTTGTTATTTCATTTCTACAAAAGGGTGACAATAA
ACAATTAGAAAAAGAACTGGAAGATGTTGCTGCTCAGTGGATGCAAGAAAACTTTGAACTAAAACAACGTATCTCTGAAC
TAGAAAAAGCAATGAAAATGGATAGCCCAAGCATTGAAGCTGAGCAAGTTCCTGATAGCCCGAAAGTTCGTGAATTAATG
AAAAAACAAGTGATTACACTTTATACTTCTGGAATCGTAACTTCAGAAATTGCTGAACAGTCATCTTTACCTAAAGAAGA
AGTGGAAAAAATCATTGAAGAATATTTAAAACATTGA

Upstream 100 bases:

>100_bases
TTTTATTTTCTTTACAAAACCTTATTTCGGATGGTGTTTTGAGGTAAATTATGCTATAACTAGTAGTAGAGTTTATGGAA
GAGAGGTGTGTATAAAACCC

Downstream 100 bases:

>100_bases
TTTAAATTTTAAAGGAGGAGCCTATCTGTGAAGAAAAACTTACGGATGTTGGCGCTAGGTTTCTTAATATCTGCTGTTGT
CTTACTGGTGTATAACCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTTVIIILLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQENFELKQRISELEKAMKMDSPSIEAEQVPDSPKVRELM
KKQVITLYTSGIVTSEIAEQSSLPKEEVEKIIEEYLKH

Sequences:

>Translated_118_residues
MTTVIIILLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQENFELKQRISELEKAMKMDSPSIEAEQVPDSPKVRELM
KKQVITLYTSGIVTSEIAEQSSLPKEEVEKIIEEYLKH
>Mature_117_residues
TTVIIILLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQENFELKQRISELEKAMKMDSPSIEAEQVPDSPKVRELMK
KQVITLYTSGIVTSEIAEQSSLPKEEVEKIIEEYLKH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13507; Mature: 13376

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVIIILLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQENFELKQRISELEKAMKM
CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSPSIEAEQVPDSPKVRELMKKQVITLYTSGIVTSEIAEQSSLPKEEVEKIIEEYLKH
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTVIIILLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQENFELKQRISELEKAMKM
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DSPSIEAEQVPDSPKVRELMKKQVITLYTSGIVTSEIAEQSSLPKEEVEKIIEEYLKH
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA