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The map label for this gene is 226223906

Identifier: 226223906

GI number: 226223906

Start: 1315981

End: 1316208

Strand: Direct

Name: 226223906

Synonym: Lm4b_01313

Alternate gene names: NA

Gene position: 1315981-1316208 (Clockwise)

Preceding gene: 226223905

Following gene: 226223907

Centisome position: 45.18

GC content: 32.46

Gene sequence:

>228_bases
ATGCTAGAAAAAGCTAAAATAGATCGTATTAATGAGCTTTCTAAAAAGAAAAAAGCCGGAACATTAACTGCTACAGAAAA
AGTGGAGCAAGATAATTTAAGAAAAGAATACATCAAGTCTTTTCGTACGCATATGAAGGGGACAATAGAAAATACAACGA
TAATCGACCCAAATGGAAAAGATGTAACGCCGCATAAAGTGAAACAACTTAGAAAAAATAAGCACTAA

Upstream 100 bases:

>100_bases
CCAGTAAGGTCGATTTAGTGGCCGTTTATGATATAATATTAGAAAGTAGCGATCATGCTGCTTTCTTATTTTTATTCTAT
AGAAGAAAAGGAGAATAACG

Downstream 100 bases:

>100_bases
TAATTAGTACCAAATAAACATTAATGAGCAAATGAACAAAAATACCAATCAATTAAGCAATTTAAAGCAATTATTAGTTG
TGTTAATTGCTTTTTAGGCT

Product: YnzC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MLEKAKIDRINELSKKKKAGTLTATEKVEQDNLRKEYIKSFRTHMKGTIENTTIIDPNGKDVTPHKVKQLRKNKH

Sequences:

>Translated_75_residues
MLEKAKIDRINELSKKKKAGTLTATEKVEQDNLRKEYIKSFRTHMKGTIENTTIIDPNGKDVTPHKVKQLRKNKH
>Mature_75_residues
MLEKAKIDRINELSKKKKAGTLTATEKVEQDNLRKEYIKSFRTHMKGTIENTTIIDPNGKDVTPHKVKQLRKNKH

Specific function: Unknown

COG id: COG4224

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0291 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009242
- InterPro:   IPR023218 [H]

Pfam domain/function: PF05979 DUF896 [H]

EC number: NA

Molecular weight: Translated: 8715; Mature: 8715

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKAKIDRINELSKKKKAGTLTATEKVEQDNLRKEYIKSFRTHMKGTIENTTIIDPNGK
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
DVTPHKVKQLRKNKH
CCCHHHHHHHHHCCC
>Mature Secondary Structure
MLEKAKIDRINELSKKKKAGTLTATEKVEQDNLRKEYIKSFRTHMKGTIENTTIIDPNGK
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCC
DVTPHKVKQLRKNKH
CCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]