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The map label for this gene is 226223868

Identifier: 226223868

GI number: 226223868

Start: 1274582

End: 1275247

Strand: Direct

Name: 226223868

Synonym: Lm4b_01275

Alternate gene names: NA

Gene position: 1274582-1275247 (Clockwise)

Preceding gene: 226223867

Following gene: 226223869

Centisome position: 43.76

GC content: 32.73

Gene sequence:

>666_bases
ATGAAGAAAAGAATAACAATGATTCTAGGTTTAGTATGTCTTAGTACATTAACTGCTTGTTCTAATAGTGAAAATGTGAA
AGAAAAAACATCAGAAGAACCAGCAACAGCTCAAAACGGAGCAGAAACAATAAAGGCGCACAATGGGGTGGTCTCTTATC
ACGGAAAATACCTCAAACTTGCTGAAAATATGGATACCCTTGAAAAAGATGCCCCAATTATCATTAAAGCAACCAAAAAA
TCTGAAAAAACAACTGTAACAAAAGAAACAAAAGAAAATGTATTTCCAACCGATTTTTATACGATGAGCGATGTGCAAAT
AAATTCTATCGAGAAAGATACAACAGGAAAATTGAGCGAGAGTATGACTATTAAAGTGTTGGAGTATAGCGTAGAAAATG
TTTTGGTAGAAGGGAAAGAATATGATTTAACTATTGATGGTTATAAAAATATGGAAAAGGGAGAAGAATATACACTTTTC
TTAGAAAAAAATCCAGATGGTGAAAATTATATACTATCAAATGCAGTTATAAGTAAATTCCCAGTGGAAGAATTACCTGA
AGAAGAATTGTTCTTAGATGGAGGGCAAACAACGGAAGAAACAGATAGCATTGAAGAAATTTATCAGGAGGTCTATCAAG
AAGTTTTGGAAGAATTCGGTGAATAA

Upstream 100 bases:

>100_bases
TGCAATTATGTTAGACAAAGGATTTATAAATAAAACAAAACCTCAAACAGACGATTTTAATGGCATCAAAGCTTTATATA
AGTAAAAAGGAGGAATGACA

Downstream 100 bases:

>100_bases
AAAAGTTTAAACGCCCGTAAGACCTCGGTGTAAAAATCGAGGTCTAATTTTTTTGAAATAAAAATTTGATAAAAAATGAA
GTTTAATCTAGACAGTTTTT

Product: oligopeptide ABC transporter AppA (binding protein)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKKRITMILGLVCLSTLTACSNSENVKEKTSEEPATAQNGAETIKAHNGVVSYHGKYLKLAENMDTLEKDAPIIIKATKK
SEKTTVTKETKENVFPTDFYTMSDVQINSIEKDTTGKLSESMTIKVLEYSVENVLVEGKEYDLTIDGYKNMEKGEEYTLF
LEKNPDGENYILSNAVISKFPVEELPEEELFLDGGQTTEETDSIEEIYQEVYQEVLEEFGE

Sequences:

>Translated_221_residues
MKKRITMILGLVCLSTLTACSNSENVKEKTSEEPATAQNGAETIKAHNGVVSYHGKYLKLAENMDTLEKDAPIIIKATKK
SEKTTVTKETKENVFPTDFYTMSDVQINSIEKDTTGKLSESMTIKVLEYSVENVLVEGKEYDLTIDGYKNMEKGEEYTLF
LEKNPDGENYILSNAVISKFPVEELPEEELFLDGGQTTEETDSIEEIYQEVYQEVLEEFGE
>Mature_221_residues
MKKRITMILGLVCLSTLTACSNSENVKEKTSEEPATAQNGAETIKAHNGVVSYHGKYLKLAENMDTLEKDAPIIIKATKK
SEKTTVTKETKENVFPTDFYTMSDVQINSIEKDTTGKLSESMTIKVLEYSVENVLVEGKEYDLTIDGYKNMEKGEEYTLF
LEKNPDGENYILSNAVISKFPVEELPEEELFLDGGQTTEETDSIEEIYQEVYQEVLEEFGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24915; Mature: 24915

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRITMILGLVCLSTLTACSNSENVKEKTSEEPATAQNGAETIKAHNGVVSYHGKYLKL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCEEEECCCEEEE
AENMDTLEKDAPIIIKATKKSEKTTVTKETKENVFPTDFYTMSDVQINSIEKDTTGKLSE
HHCHHHHHCCCCEEEEECCCCCCCEECHHHHCCCCCCCCEEECCEEEECCCCCCCCCCCC
SMTIKVLEYSVENVLVEGKEYDLTIDGYKNMEKGEEYTLFLEKNPDGENYILSNAVISKF
CEEEEEEEEHHHHHEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHCC
PVEELPEEELFLDGGQTTEETDSIEEIYQEVYQEVLEEFGE
CHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKRITMILGLVCLSTLTACSNSENVKEKTSEEPATAQNGAETIKAHNGVVSYHGKYLKL
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHCCCEEEECCCEEEE
AENMDTLEKDAPIIIKATKKSEKTTVTKETKENVFPTDFYTMSDVQINSIEKDTTGKLSE
HHCHHHHHCCCCEEEEECCCCCCCEECHHHHCCCCCCCCEEECCEEEECCCCCCCCCCCC
SMTIKVLEYSVENVLVEGKEYDLTIDGYKNMEKGEEYTLFLEKNPDGENYILSNAVISKF
CEEEEEEEEHHHHHEECCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEHHHHHHCC
PVEELPEEELFLDGGQTTEETDSIEEIYQEVYQEVLEEFGE
CHHHCCCHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA