| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is ywoG [H]
Identifier: 226223853
GI number: 226223853
Start: 1259781
End: 1260986
Strand: Reverse
Name: ywoG [H]
Synonym: Lm4b_01258
Alternate gene names: 226223853
Gene position: 1260986-1259781 (Counterclockwise)
Preceding gene: 226223855
Following gene: 226223852
Centisome position: 43.29
GC content: 37.4
Gene sequence:
>1206_bases ATGAAAGAAAAATTATTTAACAAGGGTTTTGTCTTAATAACATTGATTAACTTTGTCGTTTATCTCGTTTATTATTTGCT AATGGTTATTATTGCCGTTATTGCTCAAGAAGAGTTGAACGCGTCTCTTGGTGAAGCCGGATTTGCGTCTGGGATTTATA TTATCGGGACGCTCCTCGCACGACTTTACATGGGGAAAAAGCTGGAACTATTTGGTCGTAAGCGGGTTTTAAGATTTGGG ATTTTATTTTTCTTAGTAACGACGATGGCTTACTTATACATGCCAACGATTGCCATTATGTTTATTATTCGTTTTTTAAA TGGATTCGCATACGGAACAACTTCAACTGCTACCAATGCGATTGTCACAGCTTATATTCCTAATTCTAGAAACGGAGAAG GGATTAATTATTATGGCCTCAGCACAAGTCTCGCAGCTGCGATTGGACCGTTCATCGGAATGATTTTACTTAGCAAAACG AGCTTTTATACGATTATTATTTTCTCCACGGTTATTGTCTTATTAACTGCGCTACTTTGCTTCTATTTACCCGTGAAAAA TATTGTTTTAACAACCGAACACCGGAAGGCCTTACAAACTTGGACCGTCAAAAGTTTTATTGAATATAAAGTTATTCCAA TAACATTTATTGCCTTCTTAATGGGGATTTCTTATTCCAGTGTGCTTACATTCCTTGCTTCCTATGCTAGAGAAATTAAT TTAGTGAGTGCTGGAACGTTCTTCTTTGTTGTCTATGCATTAGTTATTACTCTAACTCGCCCAATGTCTGGAAAACTTTT CGATGCAAAAGGCGAAAAATATGTGATGTATCCAAGTTATCTCTTTTTAGCAGTTGGATTAGTGGTCCTTAGTACAGCAA CATCAAGTCTCGTGCTACTTATTTCAGGCGGACTCATCGGCTTAGGTTATGGAACGTTTATGTCGAATGGCCAAGCTGTC TGTTTAAAAGTATGTGAACCTCACCGTATTGGGATTGGCCTATCTACCTACTTTATCGGGCTTGATTTAGGACTTGGTAT TGGGCCTTATATTATGGGTGAAATTCATCATGTGCTTTCATTCCAAGGTATTTACATTATTGCCGGTGCTATCGCATTTA TTTGCGTATTCATCTATATGTTTTTATCCAGAAAAAAAGTGTCTAGTGGTGCACAGGAACAACTAAAAGGGAGTGAAGAA GTATGA
Upstream 100 bases:
>100_bases ATAATTACCAAATTAAAAAGTATCCTCTCCGAATATCCCCTATAATACTCCTTGTCGCTGAGATAAATTACAAATTATAG GTAGGAAGGGATTTTATTCT
Downstream 100 bases:
>100_bases ATAAATTATTACTCATTACAGCAGCGGGTTATATCGTAGGAGTTAGAAGTATAGAAAAGGAGAACAACCAATCTATTCTA CTAAACGATGTCTACATTAA
Product: antibiotic resistance protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKEKLFNKGFVLITLINFVVYLVYYLLMVIIAVIAQEELNASLGEAGFASGIYIIGTLLARLYMGKKLELFGRKRVLRFG ILFFLVTTMAYLYMPTIAIMFIIRFLNGFAYGTTSTATNAIVTAYIPNSRNGEGINYYGLSTSLAAAIGPFIGMILLSKT SFYTIIIFSTVIVLLTALLCFYLPVKNIVLTTEHRKALQTWTVKSFIEYKVIPITFIAFLMGISYSSVLTFLASYAREIN LVSAGTFFFVVYALVITLTRPMSGKLFDAKGEKYVMYPSYLFLAVGLVVLSTATSSLVLLISGGLIGLGYGTFMSNGQAV CLKVCEPHRIGIGLSTYFIGLDLGLGIGPYIMGEIHHVLSFQGIYIIAGAIAFICVFIYMFLSRKKVSSGAQEQLKGSEE V
Sequences:
>Translated_401_residues MKEKLFNKGFVLITLINFVVYLVYYLLMVIIAVIAQEELNASLGEAGFASGIYIIGTLLARLYMGKKLELFGRKRVLRFG ILFFLVTTMAYLYMPTIAIMFIIRFLNGFAYGTTSTATNAIVTAYIPNSRNGEGINYYGLSTSLAAAIGPFIGMILLSKT SFYTIIIFSTVIVLLTALLCFYLPVKNIVLTTEHRKALQTWTVKSFIEYKVIPITFIAFLMGISYSSVLTFLASYAREIN LVSAGTFFFVVYALVITLTRPMSGKLFDAKGEKYVMYPSYLFLAVGLVVLSTATSSLVLLISGGLIGLGYGTFMSNGQAV CLKVCEPHRIGIGLSTYFIGLDLGLGIGPYIMGEIHHVLSFQGIYIIAGAIAFICVFIYMFLSRKKVSSGAQEQLKGSEE V >Mature_401_residues MKEKLFNKGFVLITLINFVVYLVYYLLMVIIAVIAQEELNASLGEAGFASGIYIIGTLLARLYMGKKLELFGRKRVLRFG ILFFLVTTMAYLYMPTIAIMFIIRFLNGFAYGTTSTATNAIVTAYIPNSRNGEGINYYGLSTSLAAAIGPFIGMILLSKT SFYTIIIFSTVIVLLTALLCFYLPVKNIVLTTEHRKALQTWTVKSFIEYKVIPITFIAFLMGISYSSVLTFLASYAREIN LVSAGTFFFVVYALVITLTRPMSGKLFDAKGEKYVMYPSYLFLAVGLVVLSTATSSLVLLISGGLIGLGYGTFMSNGQAV CLKVCEPHRIGIGLSTYFIGLDLGLGIGPYIMGEIHHVLSFQGIYIIAGAIAFICVFIYMFLSRKKVSSGAQEQLKGSEE V
Specific function: Involved In Sulfonamide (Sulfathiazole) And Bicyclomycin Resistance. Probable Membrane Translocase. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44131; Mature: 44131
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKLFNKGFVLITLINFVVYLVYYLLMVIIAVIAQEELNASLGEAGFASGIYIIGTLLA CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHH RLYMGKKLELFGRKRVLRFGILFFLVTTMAYLYMPTIAIMFIIRFLNGFAYGTTSTATNA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC IVTAYIPNSRNGEGINYYGLSTSLAAAIGPFIGMILLSKTSFYTIIIFSTVIVLLTALLC EEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FYLPVKNIVLTTEHRKALQTWTVKSFIEYKVIPITFIAFLMGISYSSVLTFLASYAREIN HHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC LVSAGTFFFVVYALVITLTRPMSGKLFDAKGEKYVMYPSYLFLAVGLVVLSTATSSLVLL CEEHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH ISGGLIGLGYGTFMSNGQAVCLKVCEPHRIGIGLSTYFIGLDLGLGIGPYIMGEIHHVLS EECCCCEECHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH FQGIYIIAGAIAFICVFIYMFLSRKKVSSGAQEQLKGSEEV HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC >Mature Secondary Structure MKEKLFNKGFVLITLINFVVYLVYYLLMVIIAVIAQEELNASLGEAGFASGIYIIGTLLA CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHH RLYMGKKLELFGRKRVLRFGILFFLVTTMAYLYMPTIAIMFIIRFLNGFAYGTTSTATNA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC IVTAYIPNSRNGEGINYYGLSTSLAAAIGPFIGMILLSKTSFYTIIIFSTVIVLLTALLC EEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FYLPVKNIVLTTEHRKALQTWTVKSFIEYKVIPITFIAFLMGISYSSVLTFLASYAREIN HHHHHHHEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC LVSAGTFFFVVYALVITLTRPMSGKLFDAKGEKYVMYPSYLFLAVGLVVLSTATSSLVLL CEEHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHH ISGGLIGLGYGTFMSNGQAVCLKVCEPHRIGIGLSTYFIGLDLGLGIGPYIMGEIHHVLS EECCCCEECHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH FQGIYIIAGAIAFICVFIYMFLSRKKVSSGAQEQLKGSEEV HCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]