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The map label for this gene is 226223235

Identifier: 226223235

GI number: 226223235

Start: 649040

End: 649501

Strand: Direct

Name: 226223235

Synonym: Lm4b_00632

Alternate gene names: NA

Gene position: 649040-649501 (Clockwise)

Preceding gene: 226223231

Following gene: 226223236

Centisome position: 22.28

GC content: 36.8

Gene sequence:

>462_bases
ATGTCTTCGAAAAATCAAGACTTGGGGCACTCAGTAATCAAGGCTTTCATGAATTTTAAGCATGCTGAAATAAAGAGTTT
CCAAATTCCCGGTTACAGTAAATCTGAAACAAGATTTATTTTTATTTTATCTCGTGGGCTTAAAAGCAGAGGGCCAAAAA
TTCGTGTTTCCGATCTTGGTCACATGCTTAGAATTTCAAAACCAAGCGTCACGCAAATGATTCAATCTTTGGAAGGAAAA
GGACTCATTAAACGTGTTCAAAACCCAGAAGATAAGCGCTCGATGTATGTGGAATTAACAGAAGTCGGAGCAGGCGTGTC
AGAAAAAATGCTCGATGAATTTCAAGCTAGTTTTGAAGATATGCAGGAGTTTTTAGGCGAAGACGATATGAAAAAATTGA
TTACACTCCTAGAAAAACTGACAGATTACTTAAACACAAAATCCGAAAATAAGGAGGCATAA

Upstream 100 bases:

>100_bases
GATTAATTTCAAAATCGCTCCAAGATATCGCTTGACAAAAATCGAATATCTCATATAATTAGTTAGGTAAACTAATCAAA
TGATAGAAAGAAGTGGAGAA

Downstream 100 bases:

>100_bases
ACCGCAAATGATGAAATTGATGAAAAGATTAAAACCTTATTGGCTGAGCATTACGGCCGTATTAGTCCTTACTTTCGGGC
AAGTCATTGGACAGCTTTAT

Product: transcription regulator MarR family

Products: NA

Alternate protein names: Transcriptional Regulator; MarR Family Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator Marr Family

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSSKNQDLGHSVIKAFMNFKHAEIKSFQIPGYSKSETRFIFILSRGLKSRGPKIRVSDLGHMLRISKPSVTQMIQSLEGK
GLIKRVQNPEDKRSMYVELTEVGAGVSEKMLDEFQASFEDMQEFLGEDDMKKLITLLEKLTDYLNTKSENKEA

Sequences:

>Translated_153_residues
MSSKNQDLGHSVIKAFMNFKHAEIKSFQIPGYSKSETRFIFILSRGLKSRGPKIRVSDLGHMLRISKPSVTQMIQSLEGK
GLIKRVQNPEDKRSMYVELTEVGAGVSEKMLDEFQASFEDMQEFLGEDDMKKLITLLEKLTDYLNTKSENKEA
>Mature_152_residues
SSKNQDLGHSVIKAFMNFKHAEIKSFQIPGYSKSETRFIFILSRGLKSRGPKIRVSDLGHMLRISKPSVTQMIQSLEGKG
LIKRVQNPEDKRSMYVELTEVGAGVSEKMLDEFQASFEDMQEFLGEDDMKKLITLLEKLTDYLNTKSENKEA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17451; Mature: 17320

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKNQDLGHSVIKAFMNFKHAEIKSFQIPGYSKSETRFIFILSRGLKSRGPKIRVSDLG
CCCCCCHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCEEEEEEECCHHCCCCEEEHHHHH
HMLRISKPSVTQMIQSLEGKGLIKRVQNPEDKRSMYVELTEVGAGVSEKMLDEFQASFED
HHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
MQEFLGEDDMKKLITLLEKLTDYLNTKSENKEA
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSKNQDLGHSVIKAFMNFKHAEIKSFQIPGYSKSETRFIFILSRGLKSRGPKIRVSDLG
CCCCCHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCEEEEEEECCHHCCCCEEEHHHHH
HMLRISKPSVTQMIQSLEGKGLIKRVQNPEDKRSMYVELTEVGAGVSEKMLDEFQASFED
HHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
MQEFLGEDDMKKLITLLEKLTDYLNTKSENKEA
HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA