Click here to switch to the map view.

The map label for this gene is 226223230

Identifier: 226223230

GI number: 226223230

Start: 644848

End: 645948

Strand: Direct

Name: 226223230

Synonym: Lm4b_00627

Alternate gene names: NA

Gene position: 644848-645948 (Clockwise)

Preceding gene: 226223229

Following gene: 226223231

Centisome position: 22.14

GC content: 36.06

Gene sequence:

>1101_bases
ATGCGTAAACATCACTTAAGTAAAAAATTATTTTTCGCTGGTTTGGTACTATTTATTATCGGTGCTATCGGTGTAGCATT
AACGATGAACAAAGGTAATATGATAGAAAAAGGTGAACCACTTACAAAACAGTGGGACTTATCAGCTGAAAATATTAACT
CCATTGCTTTTTCTTCCGAGCGCGACGTAACGTTTGAATGGAAAGAAAGTACAAATGGAAAAAATTACATCGAACTAAAA
GGTAATTACTCTGCTAATGATAAAAAAGCCATTCAAAAATTAGATCCAGTTTCGGAAGATGGAACGTCCTTTAATATTAC
AGTTCCTGAAGAAGAGGATTGGTATAACGGCTTTGGCAAAATATACGCATACGGTCAACAAAAAGTAACCGTTTATTTAA
CAAAAGATACTAAATTAGCTGATCTAGAAGTGAAATCTCATTCTGGGGATATCAATGTAGCTGATTTTAAAGTAAAGAAA
TTTGTTAGTTCTACCAACTCAGGTGAGTTAAAAGTAAGTAATTTGGAAGCAAATACTGCTCAAATGGCTACTTCTTCTGG
GGACTTGGAATTATCGAATATGAAAGCAAATAGCTCAGTTGAAACTGGTTCTGGACAGACGGACCTTACTAATTTAACAG
GTGATTTAGAAGTAAATGGTGGTTCAGGCGATGTGAATGTTACAGGTGTTAAAGCGAAGAAACTTAAAATTGCCATCGAT
TCAGGAGACATTGAGTTGACTAGTGGCACTGTAACTGACCTAGCTGTGTTAACAACAAGTTCCGGAGACATTGATGCAAG
TACAAAAGGTAAAGTACAAGCGGAATCCAACTCAGGAGCAATCGAACTTGCAGGCATAACGAATGATGTAACAGCAAAAA
CAAGCTCAGGTGATATCGATGCAGCATTTATCAAACAAGTAAAAAACATCGAAATCAATACAGATTCTGGTGAAGTTGAA
CTTGATCTACCGGGTGATTTTAAAGCTATTTATGAAGCAAGTAGTAATTCAGGTAGCGTTAAAGCACCAACGAGTGATTC
AAATACCGATAACCGAGTAACGGTGAAAACAAGTTCCGGAGATATTAAAATCGAAAAATAA

Upstream 100 bases:

>100_bases
ATGCTTTTATTTGTAGCAAACGCGCTAACTCAGCTTACAAGTAAAGTAACAATGGCGATTATCCAGTGGCATAAATATGC
GGTAAAGGGAGGCGGAAAAA

Downstream 100 bases:

>100_bases
AAAATCAGTGCGCTAATTATTTAATTAGCGCATTCTTTTTGTTAAAAAGGGGTAAAGTCAGATAAACTGTTTCATCAATT
TGCGCAAGTGAAAGGGGAAT

Product: cell surface protein

Products: NA

Alternate protein names: Cell Surface Protein

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MRKHHLSKKLFFAGLVLFIIGAIGVALTMNKGNMIEKGEPLTKQWDLSAENINSIAFSSERDVTFEWKESTNGKNYIELK
GNYSANDKKAIQKLDPVSEDGTSFNITVPEEEDWYNGFGKIYAYGQQKVTVYLTKDTKLADLEVKSHSGDINVADFKVKK
FVSSTNSGELKVSNLEANTAQMATSSGDLELSNMKANSSVETGSGQTDLTNLTGDLEVNGGSGDVNVTGVKAKKLKIAID
SGDIELTSGTVTDLAVLTTSSGDIDASTKGKVQAESNSGAIELAGITNDVTAKTSSGDIDAAFIKQVKNIEINTDSGEVE
LDLPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK

Sequences:

>Translated_366_residues
MRKHHLSKKLFFAGLVLFIIGAIGVALTMNKGNMIEKGEPLTKQWDLSAENINSIAFSSERDVTFEWKESTNGKNYIELK
GNYSANDKKAIQKLDPVSEDGTSFNITVPEEEDWYNGFGKIYAYGQQKVTVYLTKDTKLADLEVKSHSGDINVADFKVKK
FVSSTNSGELKVSNLEANTAQMATSSGDLELSNMKANSSVETGSGQTDLTNLTGDLEVNGGSGDVNVTGVKAKKLKIAID
SGDIELTSGTVTDLAVLTTSSGDIDASTKGKVQAESNSGAIELAGITNDVTAKTSSGDIDAAFIKQVKNIEINTDSGEVE
LDLPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK
>Mature_366_residues
MRKHHLSKKLFFAGLVLFIIGAIGVALTMNKGNMIEKGEPLTKQWDLSAENINSIAFSSERDVTFEWKESTNGKNYIELK
GNYSANDKKAIQKLDPVSEDGTSFNITVPEEEDWYNGFGKIYAYGQQKVTVYLTKDTKLADLEVKSHSGDINVADFKVKK
FVSSTNSGELKVSNLEANTAQMATSSGDLELSNMKANSSVETGSGQTDLTNLTGDLEVNGGSGDVNVTGVKAKKLKIAID
SGDIELTSGTVTDLAVLTTSSGDIDASTKGKVQAESNSGAIELAGITNDVTAKTSSGDIDAAFIKQVKNIEINTDSGEVE
LDLPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK

Specific function: Unknown

COG id: COG3595

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39014; Mature: 39014

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHHLSKKLFFAGLVLFIIGAIGVALTMNKGNMIEKGEPLTKQWDLSAENINSIAFSSE
CCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEECCCHHCCCEEEECCC
RDVTFEWKESTNGKNYIELKGNYSANDKKAIQKLDPVSEDGTSFNITVPEEEDWYNGFGK
CCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEE
IYAYGQQKVTVYLTKDTKLADLEVKSHSGDINVADFKVKKFVSSTNSGELKVSNLEANTA
EEEECCEEEEEEEECCCEEEEEEEECCCCCEEEEHEEEEHHHHCCCCCCEEEEECCCCCC
QMATSSGDLELSNMKANSSVETGSGQTDLTNLTGDLEVNGGSGDVNVTGVKAKKLKIAID
EEECCCCCEEEEEEECCCCCCCCCCCCEEEECEEEEEEECCCCCEEEEEEEEEEEEEEEE
SGDIELTSGTVTDLAVLTTSSGDIDASTKGKVQAESNSGAIELAGITNDVTAKTSSGDID
CCCEEEECCCCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCEEECCCCCCCC
AAFIKQVKNIEINTDSGEVELDLPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSG
HHHHHHHHEEEEECCCCEEEEECCCCCEEEEECCCCCCEEECCCCCCCCCCEEEEEECCC
DIKIEK
CEEEEC
>Mature Secondary Structure
MRKHHLSKKLFFAGLVLFIIGAIGVALTMNKGNMIEKGEPLTKQWDLSAENINSIAFSSE
CCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCEEECCCHHCCCEEEECCC
RDVTFEWKESTNGKNYIELKGNYSANDKKAIQKLDPVSEDGTSFNITVPEEEDWYNGFGK
CCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEE
IYAYGQQKVTVYLTKDTKLADLEVKSHSGDINVADFKVKKFVSSTNSGELKVSNLEANTA
EEEECCEEEEEEEECCCEEEEEEEECCCCCEEEEHEEEEHHHHCCCCCCEEEEECCCCCC
QMATSSGDLELSNMKANSSVETGSGQTDLTNLTGDLEVNGGSGDVNVTGVKAKKLKIAID
EEECCCCCEEEEEEECCCCCCCCCCCCEEEECEEEEEEECCCCCEEEEEEEEEEEEEEEE
SGDIELTSGTVTDLAVLTTSSGDIDASTKGKVQAESNSGAIELAGITNDVTAKTSSGDID
CCCEEEECCCCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCEEECCCCCCCC
AAFIKQVKNIEINTDSGEVELDLPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSG
HHHHHHHHEEEEECCCCEEEEECCCCCEEEEECCCCCCEEECCCCCCCCCCEEEEEECCC
DIKIEK
CEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA