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The map label for this gene is inlI [H]

Identifier: 226223178

GI number: 226223178

Start: 590648

End: 592672

Strand: Direct

Name: inlI [H]

Synonym: Lm4b_00575

Alternate gene names: 226223178

Gene position: 590648-592672 (Clockwise)

Preceding gene: 226223177

Following gene: 226223179

Centisome position: 20.28

GC content: 36.59

Gene sequence:

>2025_bases
ATGAAATTTAATTGGAAAGTAGTTCTGCTGTTTGTTTTAATTTTAGCACTTATTGTTCCGGTTTATTCGAAGGCTGTAGA
AACAGGAAAAGAGTTACCTAAGAGTCCGGAACTACAAGATGATAAGTCATCTACGTTAAAAAATGTAAATACACCTAAAA
ATCTGAAAGCTAGCCCGCTAACAATTCCAGCGAATAGCACGATAGCAGATTTGTTTCCCGATGAAGGGATGGCAAAAACT
GTCGCAAACCAGCTAGGACGAACAGAAAATAACAATTTTCAAACACCTACTAAAACGGATTGGAAAGTGGATGATGTTGT
TACTGAGGTAGAGTTAAATAGAATGTGGTACTTAACTTCAGTTGCTACTATAGGAAGTATCGAAGGCATTCAATATCTAC
CCAATCTTTACAATGTACAGTTACAGTTTGATGACCAATGTAAGGATTTGTCTCCTTTTTTAAAGGCACCAAATGGATAT
CCACAGTTATATCGGTTAAATATTAATAATGGTAATATTTCAGATATTTCACCTCTTACTGAACTGAGCGCACCAACACT
TAAATATATAGACTTAGCGGGTAATAATATTTCTGATTTATCTCTTTTTAAAAAGCTTCCTAATAAATTACCTAGTTTAG
AAGAAATATCTGTAGAAAGAAATAATATATCAGATGTTTCACCGCTTGCTGATTTTGCCAGTACTAAAATAAAGGTGTTT
GATTTGGATGATAATCATATTACTGATTTATCTAGTCTTACAAATAACAAAATGCCTAATTTACAGCGATTATATGTTAG
GAGCCAAAGTTTCTATGTGGAAACGCCGGTAGTTACTTCTAGTAAGTATGAATTTTCTTTACAACCATCTGTTTTTGGAA
TAACCAAGCCGGTTAAAATAACTGCTACTAATCCCAAAGCAACTATTGATCCTATTACTTCTAAAATTACATATTCAGCA
GAAGTAATGGCCAAAAGACCGAAGTATAGCTCTAATCGGGTTTCAGGAGTTACCTATTCGTGGGACGAGGACATTCCGTT
TAATGGTAGCAATAATCTAGTTGAATACAATGGTACGTTTTACAAGCCATTAACTTATGTTGAACCGCCCCAAGTTGTGT
CTTACAATTCAGGCCTTACTTATGAGCTAGGTACACCACTTACGGAACAACAATTTCTAAACGATCTCAATGTGATAACA
GATCAACCAACAACGATTACTACAAATTTTGATAAGGTGCTAAAAGATGTGAATTCTGTAGGCTTTTACCCTGTCACTAT
CAAAGCTTCTAACATAGAAGGAAATACGGAGTTCACTACTTCGGTACTGATTAAGTATAAGCCACCAGTTATAACCGCAG
ATGCAGAATACACCTATTTAGTAGGAGATAAAGTGAATGCTACTCAATTTCGAGCAGATGTAAATGCAACTTTGACAGGT
GAAGGAACACTAAGAGATGACTTTATATATAAAGTAAGACTTAATACGGCGGGAGATTATGTTGTAACTCTTTCTTCACC
TAAAAGTGGCTACTATGAGCAAGATGCAATACCTGTTACAGTCATTGTTCACGTAAAAGAACTTTTGGAATTGCAAATCC
CAGATGAATTTCGAATGGATATAGATGCAAATGCAGATTCCGTACCAATTTCAGATAAGAAACAAACACTTACATGCTAT
GGTTCGTCTGGAAAGGCTGAGTTAGAGGTGATCGATAGACGAACTGTGCGGCAAGGCTGGACGATAACGGGTGCGATGAC
GCCATTTACCAATAGCGGCGGCGATATACTACAAACTTCGCTAAAATATCAAAGCAAATCGCCTTCCAGTAGTCCGATTT
ATTTAAATACGACGAATCAACCTATCGAAAAGAAACAATCAGCTGTGACAGACCCAAAATATGATTCTACCATCGTCAAT
CTGGAAGACAGTTTATCCATGGAAATTGAGCCAAATGATGCGCTAGTGAACGATTCCTATGAGTCGAAAATCACCTGGAC
ACTAGAAGATGCGCCTCGACCATAA

Upstream 100 bases:

>100_bases
AAATTTTAAAACCGCATGAAAATACTTTTATTGTTCAAAAAAAAGTAGCAAGTCATTATGAAGACCAGCTAACTAGCATT
TAAAAGGAGACATAAAAATA

Downstream 100 bases:

>100_bases
TAAGCAATCAGCTACATCAAACAAAAGGAGCTATCTAAATTGAAAAAAATGGGATTCATTTTAATCTGTTGTTTATTTGT
GTGCGCCTCGCCGTTTTATG

Product: internalin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MKFNWKVVLLFVLILALIVPVYSKAVETGKELPKSPELQDDKSSTLKNVNTPKNLKASPLTIPANSTIADLFPDEGMAKT
VANQLGRTENNNFQTPTKTDWKVDDVVTEVELNRMWYLTSVATIGSIEGIQYLPNLYNVQLQFDDQCKDLSPFLKAPNGY
PQLYRLNINNGNISDISPLTELSAPTLKYIDLAGNNISDLSLFKKLPNKLPSLEEISVERNNISDVSPLADFASTKIKVF
DLDDNHITDLSSLTNNKMPNLQRLYVRSQSFYVETPVVTSSKYEFSLQPSVFGITKPVKITATNPKATIDPITSKITYSA
EVMAKRPKYSSNRVSGVTYSWDEDIPFNGSNNLVEYNGTFYKPLTYVEPPQVVSYNSGLTYELGTPLTEQQFLNDLNVIT
DQPTTITTNFDKVLKDVNSVGFYPVTIKASNIEGNTEFTTSVLIKYKPPVITADAEYTYLVGDKVNATQFRADVNATLTG
EGTLRDDFIYKVRLNTAGDYVVTLSSPKSGYYEQDAIPVTVIVHVKELLELQIPDEFRMDIDANADSVPISDKKQTLTCY
GSSGKAELEVIDRRTVRQGWTITGAMTPFTNSGGDILQTSLKYQSKSPSSSPIYLNTTNQPIEKKQSAVTDPKYDSTIVN
LEDSLSMEIEPNDALVNDSYESKITWTLEDAPRP

Sequences:

>Translated_674_residues
MKFNWKVVLLFVLILALIVPVYSKAVETGKELPKSPELQDDKSSTLKNVNTPKNLKASPLTIPANSTIADLFPDEGMAKT
VANQLGRTENNNFQTPTKTDWKVDDVVTEVELNRMWYLTSVATIGSIEGIQYLPNLYNVQLQFDDQCKDLSPFLKAPNGY
PQLYRLNINNGNISDISPLTELSAPTLKYIDLAGNNISDLSLFKKLPNKLPSLEEISVERNNISDVSPLADFASTKIKVF
DLDDNHITDLSSLTNNKMPNLQRLYVRSQSFYVETPVVTSSKYEFSLQPSVFGITKPVKITATNPKATIDPITSKITYSA
EVMAKRPKYSSNRVSGVTYSWDEDIPFNGSNNLVEYNGTFYKPLTYVEPPQVVSYNSGLTYELGTPLTEQQFLNDLNVIT
DQPTTITTNFDKVLKDVNSVGFYPVTIKASNIEGNTEFTTSVLIKYKPPVITADAEYTYLVGDKVNATQFRADVNATLTG
EGTLRDDFIYKVRLNTAGDYVVTLSSPKSGYYEQDAIPVTVIVHVKELLELQIPDEFRMDIDANADSVPISDKKQTLTCY
GSSGKAELEVIDRRTVRQGWTITGAMTPFTNSGGDILQTSLKYQSKSPSSSPIYLNTTNQPIEKKQSAVTDPKYDSTIVN
LEDSLSMEIEPNDALVNDSYESKITWTLEDAPRP
>Mature_674_residues
MKFNWKVVLLFVLILALIVPVYSKAVETGKELPKSPELQDDKSSTLKNVNTPKNLKASPLTIPANSTIADLFPDEGMAKT
VANQLGRTENNNFQTPTKTDWKVDDVVTEVELNRMWYLTSVATIGSIEGIQYLPNLYNVQLQFDDQCKDLSPFLKAPNGY
PQLYRLNINNGNISDISPLTELSAPTLKYIDLAGNNISDLSLFKKLPNKLPSLEEISVERNNISDVSPLADFASTKIKVF
DLDDNHITDLSSLTNNKMPNLQRLYVRSQSFYVETPVVTSSKYEFSLQPSVFGITKPVKITATNPKATIDPITSKITYSA
EVMAKRPKYSSNRVSGVTYSWDEDIPFNGSNNLVEYNGTFYKPLTYVEPPQVVSYNSGLTYELGTPLTEQQFLNDLNVIT
DQPTTITTNFDKVLKDVNSVGFYPVTIKASNIEGNTEFTTSVLIKYKPPVITADAEYTYLVGDKVNATQFRADVNATLTG
EGTLRDDFIYKVRLNTAGDYVVTLSSPKSGYYEQDAIPVTVIVHVKELLELQIPDEFRMDIDANADSVPISDKKQTLTCY
GSSGKAELEVIDRRTVRQGWTITGAMTPFTNSGGDILQTSLKYQSKSPSSSPIYLNTTNQPIEKKQSAVTDPKYDSTIVN
LEDSLSMEIEPNDALVNDSYESKITWTLEDAPRP

Specific function: Unknown. A role in virulence could not be demonstrated [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014755
- InterPro:   IPR014756
- InterPro:   IPR001611
- InterPro:   IPR019931
- InterPro:   IPR012569
- InterPro:   IPR000601
- InterPro:   IPR001899 [H]

Pfam domain/function: PF00560 LRR_1; PF08191 LRR_adjacent [H]

EC number: NA

Molecular weight: Translated: 75023; Mature: 75023

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNWKVVLLFVLILALIVPVYSKAVETGKELPKSPELQDDKSSTLKNVNTPKNLKASPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCE
TIPANSTIADLFPDEGMAKTVANQLGRTENNNFQTPTKTDWKVDDVVTEVELNRMWYLTS
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEEECCEEEEEEE
VATIGSIEGIQYLPNLYNVQLQFDDQCKDLSPFLKAPNGYPQLYRLNINNGNISDISPLT
HHHHCCCCCHHHCCCEEEEEEEECCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCHHH
ELSAPTLKYIDLAGNNISDLSLFKKLPNKLPSLEEISVERNNISDVSPLADFASTKIKVF
HCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCCCHHHHHHCCCEEEEE
DLDDNHITDLSSLTNNKMPNLQRLYVRSQSFYVETPVVTSSKYEFSLQPSVFGITKPVKI
ECCCCCCHHHHHHHCCCCCCCEEEEEECCCEEEECCEEECCCEEEEECCCEEECCCCEEE
TATNPKATIDPITSKITYSAEVMAKRPKYSSNRVSGVTYSWDEDIPFNGSNNLVEYNGTF
EECCCCCEECCCCCEEEEEHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCEE
YKPLTYVEPPQVVSYNSGLTYELGTPLTEQQFLNDLNVITDQPTTITTNFDKVLKDVNSV
ECCEEECCCCCEEEECCCEEEECCCCCCHHHHHHHHHEECCCCCEEECCHHHHHHHHHHC
GFYPVTIKASNIEGNTEFTTSVLIKYKPPVITADAEYTYLVGDKVNATQFRADVNATLTG
CEEEEEEEECCCCCCCEEEEEEEEEECCCEEECCCCEEEEECCCCCCEEEEECCCEEEEC
EGTLRDDFIYKVRLNTAGDYVVTLSSPKSGYYEQDAIPVTVIVHVKELLELQIPDEFRMD
CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHCCCCHHHEEE
IDANADSVPISDKKQTLTCYGSSGKAELEVIDRRTVRQGWTITGAMTPFTNSGGDILQTS
ECCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHCCEEEEEEECCCCCCCCHHHHHH
LKYQSKSPSSSPIYLNTTNQPIEKKQSAVTDPKYDSTIVNLEDSLSMEIEPNDALVNDSY
HHHCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCEECCCC
ESKITWTLEDAPRP
CCEEEEEECCCCCC
>Mature Secondary Structure
MKFNWKVVLLFVLILALIVPVYSKAVETGKELPKSPELQDDKSSTLKNVNTPKNLKASPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCE
TIPANSTIADLFPDEGMAKTVANQLGRTENNNFQTPTKTDWKVDDVVTEVELNRMWYLTS
EECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHEEEECCEEEEEEE
VATIGSIEGIQYLPNLYNVQLQFDDQCKDLSPFLKAPNGYPQLYRLNINNGNISDISPLT
HHHHCCCCCHHHCCCEEEEEEEECCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCHHH
ELSAPTLKYIDLAGNNISDLSLFKKLPNKLPSLEEISVERNNISDVSPLADFASTKIKVF
HCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCCCHHHHHHCCCEEEEE
DLDDNHITDLSSLTNNKMPNLQRLYVRSQSFYVETPVVTSSKYEFSLQPSVFGITKPVKI
ECCCCCCHHHHHHHCCCCCCCEEEEEECCCEEEECCEEECCCEEEEECCCEEECCCCEEE
TATNPKATIDPITSKITYSAEVMAKRPKYSSNRVSGVTYSWDEDIPFNGSNNLVEYNGTF
EECCCCCEECCCCCEEEEEHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCEE
YKPLTYVEPPQVVSYNSGLTYELGTPLTEQQFLNDLNVITDQPTTITTNFDKVLKDVNSV
ECCEEECCCCCEEEECCCEEEECCCCCCHHHHHHHHHEECCCCCEEECCHHHHHHHHHHC
GFYPVTIKASNIEGNTEFTTSVLIKYKPPVITADAEYTYLVGDKVNATQFRADVNATLTG
CEEEEEEEECCCCCCCEEEEEEEEEECCCEEECCCCEEEEECCCCCCEEEEECCCEEEEC
EGTLRDDFIYKVRLNTAGDYVVTLSSPKSGYYEQDAIPVTVIVHVKELLELQIPDEFRMD
CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHHHHHCCCCHHHEEE
IDANADSVPISDKKQTLTCYGSSGKAELEVIDRRTVRQGWTITGAMTPFTNSGGDILQTS
ECCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHHCCEEEEEEECCCCCCCCHHHHHH
LKYQSKSPSSSPIYLNTTNQPIEKKQSAVTDPKYDSTIVNLEDSLSMEIEPNDALVNDSY
HHHCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCEECCCC
ESKITWTLEDAPRP
CCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]