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The map label for this gene is 226223122

Identifier: 226223122

GI number: 226223122

Start: 530787

End: 531011

Strand: Direct

Name: 226223122

Synonym: Lm4b_00519

Alternate gene names: NA

Gene position: 530787-531011 (Clockwise)

Preceding gene: 226223121

Following gene: 226223123

Centisome position: 18.22

GC content: 32.44

Gene sequence:

>225_bases
ATGAAATTGTTATTAAAAAATATTAATGAACTTGCTGCAAAACAAAAAAGTGAAGGATTAACTGCTTTTGAAAAAGAAAG
ACAAGCTGCCCTTCGTCAAGAATATTTGAAAAAAATTCGAGGAACTGTTCAAGATAACTTACATCACGTAACAATCATTG
ATCCACTTGGAGACGACGTAACTCCTAAAAAACTAAAAGAAATCCAAGCCGAATTAAGAGGCTGA

Upstream 100 bases:

>100_bases
AAAAACTGCTCGAAAAAGAAGTTTGACTTTTGTTGACCTTTATATTATAATTTGGTTAGTTACTTATTAAAAGTAACTAG
ATAATGATAGGAGGGATAGC

Downstream 100 bases:

>100_bases
TATAAGTCATAGAAGGTTGAAAGAGCTCATTGCTTTTTCAGCCTTTTTTTGTTGATAGAGCTAATTTACCATCTTGCGGA
TTCGAGTAGAGAAAAATGGT

Product: YnzC protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQDNLHHVTIIDPLGDDVTPKKLKEIQAELRG

Sequences:

>Translated_74_residues
MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQDNLHHVTIIDPLGDDVTPKKLKEIQAELRG
>Mature_74_residues
MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQDNLHHVTIIDPLGDDVTPKKLKEIQAELRG

Specific function: Unknown

COG id: COG4224

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0291 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y496_LISMO (P60073)

Other databases:

- EMBL:   AL591975
- PIR:   AI1136
- RefSeq:   NP_464024.1
- ProteinModelPortal:   P60073
- SMR:   P60073
- GeneID:   984435
- GenomeReviews:   AL591824_GR
- KEGG:   lmo:lmo0496
- GenoList:   LMO0496
- HOGENOM:   HBG727491
- OMA:   YLKMIRG
- ProtClustDB:   CLSK563939
- BioCyc:   LMON169963:LMO0496-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01103
- InterPro:   IPR009242
- InterPro:   IPR023218
- Gene3D:   G3DSA:1.10.287.540

Pfam domain/function: PF05979 DUF896

EC number: NA

Molecular weight: Translated: 8436; Mature: 8436

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQDNLHHVTIIDPLGDDV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
TPKKLKEIQAELRG
CHHHHHHHHHHHCC
>Mature Secondary Structure
MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQDNLHHVTIIDPLGDDV
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
TPKKLKEIQAELRG
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669