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The map label for this gene is pepE [C]

Identifier: 226222990

GI number: 226222990

Start: 391753

End: 392382

Strand: Reverse

Name: pepE [C]

Synonym: Lm4b_00382

Alternate gene names: 226222990

Gene position: 392382-391753 (Counterclockwise)

Preceding gene: 226222998

Following gene: 226222989

Centisome position: 13.47

GC content: 36.83

Gene sequence:

>630_bases
ATGAAAAACTTATTTTTAACCTCGTCTTTTAAAGATGTTGTGCCATTATTTAACGAATTTGAAAGCAATCTCCAAGGAAA
AACCGTTACTTTTATCCCGACCGCTAGCACAGTCGAAGAAGTAGTTTTTTATGTAGAAGCTGGTAAGAAAGCACTGGAGA
AGTTGGGGTTATTCGTCGTAGAACTCGATGTTGCTACAGAAAGTTTAGACCACATTGCTGCGACACTCAGAAAAAATGAT
TTTATTTATGTTACTGGAGGCAATACCTTCTTTTTGTTACAGGAATTAAAGCGAACTGGGGCAGATAAACTAATTTTAGA
AGAAATTGCTGCTGGAAAATTATACATCGGTGAATCAGCCGGAGCAGTTATCACCTCACCTAATATTGCGTACATTCAAT
CGATGGACAGCCCCAAAAAAGCCGAACAATTAACAAACTATGATGCCTTAAACTTAGTCGATTTCTGCACACTCCCGCAC
TACAACAACATTCCGTTTAAAAAAATAACGCAAAAAATAGTTGCTGACTATACTAAAAGTTTAAAAATGCATCTGATTAG
CAATCATGAAGCTATTCTCGTTCGCGATGAAGAAGTAATCACTAAACTTGCTACCGGAAAAACAGATTGA

Upstream 100 bases:

>100_bases
CATCGCCATCTCTTTTCTTTTTCCAGATTAAAAGGTGTCACTAATTGATACCTTTAAGCATTATACTATAACTAGAAACC
AAACCAAAGGAGCTAGGATG

Downstream 100 bases:

>100_bases
CATCCGTTAGGTTTCGATTTAGAATTAGTTGATAATGATTATCATTTTCAACTAAAGAATGGAGGAAATCGAAATGATCG
GACCAGGAAGTATCGCTTTA

Product: peptidase E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKNLFLTSSFKDVVPLFNEFESNLQGKTVTFIPTASTVEEVVFYVEAGKKALEKLGLFVVELDVATESLDHIAATLRKND
FIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQSMDSPKKAEQLTNYDALNLVDFCTLPH
YNNIPFKKITQKIVADYTKSLKMHLISNHEAILVRDEEVITKLATGKTD

Sequences:

>Translated_209_residues
MKNLFLTSSFKDVVPLFNEFESNLQGKTVTFIPTASTVEEVVFYVEAGKKALEKLGLFVVELDVATESLDHIAATLRKND
FIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQSMDSPKKAEQLTNYDALNLVDFCTLPH
YNNIPFKKITQKIVADYTKSLKMHLISNHEAILVRDEEVITKLATGKTD
>Mature_209_residues
MKNLFLTSSFKDVVPLFNEFESNLQGKTVTFIPTASTVEEVVFYVEAGKKALEKLGLFVVELDVATESLDHIAATLRKND
FIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQSMDSPKKAEQLTNYDALNLVDFCTLPH
YNNIPFKKITQKIVADYTKSLKMHLISNHEAILVRDEEVITKLATGKTD

Specific function: Hydrolyzes Dipeptides Containing N-Terminal Aspartate Residues. May Play A Role In Allowing The Cell To Use Peptide Aspartate To Spare Carbon Otherwise Required For The Synthesis Of The Aspartate Family Of Amino Acids. [C]

COG id: COG3340

COG function: function code E; Peptidase E

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S51 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005320 [H]

Pfam domain/function: PF03575 Peptidase_S51 [H]

EC number: 3.4.13.21 [C]

Molecular weight: Translated: 23242; Mature: 23242

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLFLTSSFKDVVPLFNEFESNLQGKTVTFIPTASTVEEVVFYVEAGKKALEKLGLFVV
CCCEEECCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCEEEE
ELDVATESLDHIAATLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESA
EEEHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHHHHHCCCHHHHHHHHCCCEEEECCCC
GAVITSPNIAYIQSMDSPKKAEQLTNYDALNLVDFCTLPHYNNIPFKKITQKIVADYTKS
CEEEECCCEEEEECCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LKMHLISNHEAILVRDEEVITKLATGKTD
HHHEEECCCCEEEEECHHHHHHHHCCCCC
>Mature Secondary Structure
MKNLFLTSSFKDVVPLFNEFESNLQGKTVTFIPTASTVEEVVFYVEAGKKALEKLGLFVV
CCCEEECCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCEEEE
ELDVATESLDHIAATLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESA
EEEHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHHHHHCCCHHHHHHHHCCCEEEECCCC
GAVITSPNIAYIQSMDSPKKAEQLTNYDALNLVDFCTLPHYNNIPFKKITQKIVADYTKS
CEEEECCCEEEEECCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
LKMHLISNHEAILVRDEEVITKLATGKTD
HHHEEECCCCEEEEECHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]