The gene/protein map for NC_012488 is currently unavailable.
Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is lmaA

Identifier: 226222757

GI number: 226222757

Start: 125925

End: 126437

Strand: Direct

Name: lmaA

Synonym: Lm4b_00122

Alternate gene names: NA

Gene position: 125925-126437 (Clockwise)

Preceding gene: 226222756

Following gene: 226222758

Centisome position: 4.32

GC content: 41.52

Gene sequence:

>513_bases
ATGGCATTTGAAGAGAATTTATATTGTGATTATACACCGGGAGCTGCTAAAGCGGTCGCGGGGAAAGATGTAATTTTAGC
AGTTTTTAACGCAGCGGGGGATAAGCTATTAGCGGTTGCGGGGCAACAAGGTCTAACTGTAAACCGTTCTAAAGATAGCA
TTGAAATTACATCTAAAGATACAGTTGGCGGATGGAAATCCAAAATTGGCGGTATGAAAGAATGGTCAATTGAAAATGAC
GGATTATATGTCGCTGATGCAGAGTCTCACAAAGAATTGGCGAAATATTTCGAAAGTGATAGCCCGGTTTGCGTGAAAAT
CATTAATCAAGCATCTAAAAAAGGTCTTTTCGGTGGTTTGGCAATTGTAGCTGACTATAGTTTTGAAGCACCTTTTGATG
AAGCGATGACTTACTCTGTAAAACTAGACGGAATGGGTGCGCTTGTTGATTTAACGATTACTGAGGGCGGAGATCAAATG
CCCGGCGAAACACCTGTAGCACCAGCAGAATAA

Upstream 100 bases:

>100_bases
ACAAAATTTAGTCAAAGAAAATACGTTAATTCACGCAAAAACCAGTTTTGAAGTAAGTATTTGTCGTGAATTAAAAGTAA
AAATTTAGGGGGAAATATTA

Downstream 100 bases:

>100_bases
AATAGAGAGCCACTGAAATAAGTGGCTTTCCCTTAGGAGGAAAATAAATGTTTGAAGTGAATGATACAACTTATATTTTA
CGATTTAATAAACAAAAAGT

Product: antigen A

Products: NA

Alternate protein names: Phage Tail Protein

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIEND
GLYVADAESHKELAKYFESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQM
PGETPVAPAE

Sequences:

>Translated_170_residues
MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIEND
GLYVADAESHKELAKYFESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQM
PGETPVAPAE
>Mature_169_residues
AFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIENDG
LYVADAESHKELAKYFESDSPVCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQMP
GETPVAPAE

Specific function: Unknown

COG id: COG5437

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17994; Mature: 17863

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKD
CCCCCCEEEEECCCCCHHHCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEECCC
TVGGWKSKIGGMKEWSIENDGLYVADAESHKELAKYFESDSPVCVKIINQASKKGLFGGL
CCCCHHHHHCCCEECCCCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCE
AIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQMPGETPVAPAE
EEEEECCCCCCCCHHEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQGLTVNRSKDSIEITSKD
CCCCCEEEEECCCCCHHHCCCCEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEECCC
TVGGWKSKIGGMKEWSIENDGLYVADAESHKELAKYFESDSPVCVKIINQASKKGLFGGL
CCCCHHHHHCCCEECCCCCCCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCE
AIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQMPGETPVAPAE
EEEEECCCCCCCCHHEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA