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The map label for this gene is ycfX [C]

Identifier: 226222745

GI number: 226222745

Start: 115110

End: 116012

Strand: Direct

Name: ycfX [C]

Synonym: Lm4b_00110

Alternate gene names: 226222745

Gene position: 115110-116012 (Clockwise)

Preceding gene: 226222744

Following gene: 226222748

Centisome position: 3.95

GC content: 38.98

Gene sequence:

>903_bases
ATGTATTTTGTATACGATATTGGTGGAACTTTTGTTAAATTTGCGTTGATGGAAAATAACGGTACGGTGAAAATGAAAGA
TAAATTCCCTACAACTGCCAAAAGTGCAGAAGAACTTGTAGCTCAAATGGTCGAAAAGTGGCGCCCCTATAGTACAGAAG
TGAAGGGCATAGCTGTGAGTTGTCCGGGAGTGGTAGATACGGAAAAAGGCGTGATTTACCAAGGTGGCTCGCTATTATTT
ATGCATGAGAAAAATTTGGCTGAAATGCTAGCGCGTGAATGTCATGTTCCCGTTGTCTTGCAAAATGATGCGAAGAGTGC
GGCTTTAGCGGAACTTTGGTTAGGTGTGGCAAAAAATGTACATAGCGCGGCGATTTTAACGCTTGGAAGTGGCGTTGGTG
GCGGAATTATTATGGATGGTAAATTACAATCTGGCTATCATTTGATGGCGGGAGAAGTTAGTTTTATGGAGACTTCTTTT
GATACGAAGAAATTGCGAGGTACATTCTTTGGAAGAACTGGATCAGCGGTGGAGTTAATTAAGCGCATTGCATCAAAGAA
GAATTTACCCAATAAAAAAGATGGTGAGCAGGTTTTCGAATTAATTAACCAAGGCGATGAAGAAGCGAATGCTATTTTTG
ATGTGTATATTTATGAATTAACATCTCAAATTTTAAATATCCAGTATTTGATTGATCCGGAAATTATTGCAATTGGTGGT
GGCATTAGCGCTCAACCAGTTGTTGTTGATAGACTAAACGAAGCTGTCGCAGAAATAAAAGATGCTAATCCTTATCATGC
CGCACAACCGAAAATCGTCACTTGTCATTTCCAAAATGATGCGAATTTGTACGGAGCATTGTATAATTTCTTTTTACAAA
TGGATGCGCAAAATAAAAGGTAA

Upstream 100 bases:

>100_bases
GACAAAAACAGAGATTCTTTTCGGAGAATCTCTGTTTTTATTTGAAAAAGTGACCAAACGTATTACAATGAATAAAAGCG
ACAAGAGAGGGTGCAGAAGG

Downstream 100 bases:

>100_bases
CTAGAATCTCTAGTTACCTTTTTTCTATAAAGCTTGCAACATATCAAACTGTGATTGATATAAATTATAGTAGTAGCCGT
GCTGTGCCATCAGTTCTTCG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMVEKWRPYSTEVKGIAVSCPGVVDTEKGVIYQGGSLLF
MHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSF
DTKKLRGTFFGRTGSAVELIKRIASKKNLPNKKDGEQVFELINQGDEEANAIFDVYIYELTSQILNIQYLIDPEIIAIGG
GISAQPVVVDRLNEAVAEIKDANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR

Sequences:

>Translated_300_residues
MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMVEKWRPYSTEVKGIAVSCPGVVDTEKGVIYQGGSLLF
MHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSF
DTKKLRGTFFGRTGSAVELIKRIASKKNLPNKKDGEQVFELINQGDEEANAIFDVYIYELTSQILNIQYLIDPEIIAIGG
GISAQPVVVDRLNEAVAEIKDANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR
>Mature_300_residues
MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMVEKWRPYSTEVKGIAVSCPGVVDTEKGVIYQGGSLLF
MHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSF
DTKKLRGTFFGRTGSAVELIKRIASKKNLPNKKDGEQVFELINQGDEEANAIFDVYIYELTSQILNIQYLIDPEIIAIGG
GISAQPVVVDRLNEAVAEIKDANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1787363, Length=311, Percent_Identity=26.6881028938907, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87081733, Length=281, Percent_Identity=23.4875444839858, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 32940; Mature: 32940

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMVEKWRPYSTEVKGIAVS
CEEEEECCCCEEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE
CPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNV
CCCCEECCCCEEEECCCEEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCC
HSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDTKKLRGTFFGRTGSAVELI
CCEEEEEECCCCCCCEEEECCCCCCEEEEECCEEEEECCCCHHHHCEEECCCCCHHHHHH
KRIASKKNLPNKKDGEQVFELINQGDEEANAIFDVYIYELTSQILNIQYLIDPEIIAIGG
HHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECC
GISAQPVVVDRLNEAVAEIKDANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMVEKWRPYSTEVKGIAVS
CEEEEECCCCEEEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE
CPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNV
CCCCEECCCCEEEECCCEEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCC
HSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDTKKLRGTFFGRTGSAVELI
CCEEEEEECCCCCCCEEEECCCCCCEEEEECCEEEEECCCCHHHHCEEECCCCCHHHHHH
KRIASKKNLPNKKDGEQVFELINQGDEEANAIFDVYIYELTSQILNIQYLIDPEIIAIGG
HHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCEEEEECC
GISAQPVVVDRLNEAVAEIKDANPYHAAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]