| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226222743
Identifier: 226222743
GI number: 226222743
Start: 112075
End: 112446
Strand: Direct
Name: 226222743
Synonym: Lm4b_00108
Alternate gene names: NA
Gene position: 112075-112446 (Clockwise)
Preceding gene: 226222742
Following gene: 226222744
Centisome position: 3.85
GC content: 33.06
Gene sequence:
>372_bases ATGACTATCAAAATAACTCGTAAAACTGGAATTGGCAGCGGTATTACTCCGGTGAAAATTAGAATCGAAAATGAAGAAAT TGTAAAACTCGACAATCATCAGTCTCATTTTTTTATGCCTAAGATGGAGAAAACAAAGGTTTGCGTGACTAATTGGTTTT ATGGGAGTCAGGAAGCGGTTTTGGAAAATAATAATGATGTTATTGTGCGGATTAACCGTAAAGCACTAATATTAAATTAT TCAATGTTTCCATTTCTTTTTTTCGGACTTTTGGCCACTAGTTGGGAGTCTACAGTCATTGCGTTAATACTTTGTTTGGC ATCATTTTTTTATTCGCGAAAGCATTGGTTTGAATTTGTGAAAATTAAATAA
Upstream 100 bases:
>100_bases CTTAAAAGAGGGCAAGGAAATAGCTGATATTTCCTTGTTCTTTTTTTGTTCCTTTCTTGATATAATTAAAATAACATACA GCCAAGGAGGAGAAGCAACT
Downstream 100 bases:
>100_bases TAATTCATGGATAGCGTGGGATATGTTCTCATGCTTTTTTTATCTGTGTAAGTTTTTATTCCATCTGTGTATCTTAGGAA GGGGTCTTAAACCGCAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEKTKVCVTNWFYGSQEAVLENNNDVIVRINRKALILNY SMFPFLFFGLLATSWESTVIALILCLASFFYSRKHWFEFVKIK
Sequences:
>Translated_123_residues MTIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEKTKVCVTNWFYGSQEAVLENNNDVIVRINRKALILNY SMFPFLFFGLLATSWESTVIALILCLASFFYSRKHWFEFVKIK >Mature_122_residues TIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEKTKVCVTNWFYGSQEAVLENNNDVIVRINRKALILNYS MFPFLFFGLLATSWESTVIALILCLASFFYSRKHWFEFVKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14383; Mature: 14252
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEKTKVCVTNWFYGSQEAV CEEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCEEECCCCCCCEEEEEEEEECCCCEE LENNNDVIVRINRKALILNYSMFPFLFFGLLATSWESTVIALILCLASFFYSRKHWFEFV EECCCCEEEEECCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHEEEE KIK EEC >Mature Secondary Structure TIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEKTKVCVTNWFYGSQEAV EEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCEEECCCCCCCEEEEEEEEECCCCEE LENNNDVIVRINRKALILNYSMFPFLFFGLLATSWESTVIALILCLASFFYSRKHWFEFV EECCCCEEEEECCEEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHEEEE KIK EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA