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The map label for this gene is ydgI [H]

Identifier: 226222742

GI number: 226222742

Start: 111347

End: 111979

Strand: Direct

Name: ydgI [H]

Synonym: Lm4b_00107

Alternate gene names: 226222742

Gene position: 111347-111979 (Clockwise)

Preceding gene: 226222741

Following gene: 226222743

Centisome position: 3.82

GC content: 40.44

Gene sequence:

>633_bases
ATGACTTATGTAAATAATGATTTTGAAGACTTAATGAAAAACCGCCGCTCGATTCGAGAATACGATGAAACGGTGAAAAT
TAGCCAAGAAGAAATGAAAGCTATTCTAGAGGACGCGGTAACGGCTCCTTCCTCTGTAAACATGCAACCATGGCGTTTTG
TAGTTGTGGAAAGTGATGCGGGTAAAGAAAAATTAAGCTCGTTAGTTCGCTTTAATACACGTCAAAATGAATCTTCTTCC
GCGATGATTTTAGTTTTTGGCGACTTAGAGAATTTTGAAAACGGTGAAAAAATTTACGGAGAATCAGTTGAACGCGGCTT
GATGCCGGCAGAAGTGAAAGAACAACAAATGGCTAAATTAAGCCAGTACTTTGCATCCATTCCGCGCACAGAAGCAGAAC
GTGTAGTCCTTATTGACGGCGGAATTGTAGCGATGCAATTAATGTTAGTTGCTCGGGCGCATGGTTATGATACAAATCCA
ATTGGTGGTTTTGAACGTACGGAAGTTGCTGAGGCCTTCAATATGGATCCAGAGCGTTATGTACCGGTTATGATTGTTTC
TATCGGTAAAGCTAAAAATTCTGGCTACCAGTCTTATCGATTACCAATTACGGATGTTACGACTTTTGCTTAA

Upstream 100 bases:

>100_bases
GAGCATTTCAAAAAATTCCAGAAATTGGCTGCTGATTTTGTTGCTAAAGAACTTGAAATTTCAGTATTAACGCCACTTGC
GCGATAAGGAGGACCATAAT

Downstream 100 bases:

>100_bases
AAGAGGGCAAGGAAATAGCTGATATTTCCTTGTTCTTTTTTTGTTCCTTTCTTGATATAATTAAAATAACATACAGCCAA
GGAGGAGAAGCAACTATGAC

Product: NADH oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTYVNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSS
AMILVFGDLENFENGEKIYGESVERGLMPAEVKEQQMAKLSQYFASIPRTEAERVVLIDGGIVAMQLMLVARAHGYDTNP
IGGFERTEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA

Sequences:

>Translated_210_residues
MTYVNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSS
AMILVFGDLENFENGEKIYGESVERGLMPAEVKEQQMAKLSQYFASIPRTEAERVVLIDGGIVAMQLMLVARAHGYDTNP
IGGFERTEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA
>Mature_209_residues
TYVNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSSA
MILVFGDLENFENGEKIYGESVERGLMPAEVKEQQMAKLSQYFASIPRTEAERVVLIDGGIVAMQLMLVARAHGYDTNPI
GGFERTEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 23700; Mature: 23569

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
GKEKLSSLVRFNTRQNESSSAMILVFGDLENFENGEKIYGESVERGLMPAEVKEQQMAKL
CHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
SQYFASIPRTEAERVVLIDGGIVAMQLMLVARAHGYDTNPIGGFERTEVAEAFNMDPERY
HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHC
VPVMIVSIGKAKNSGYQSYRLPITDVTTFA
CCEEEEEECCCCCCCCCEEECCHHCCCCCC
>Mature Secondary Structure 
TYVNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDA
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
GKEKLSSLVRFNTRQNESSSAMILVFGDLENFENGEKIYGESVERGLMPAEVKEQQMAKL
CHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH
SQYFASIPRTEAERVVLIDGGIVAMQLMLVARAHGYDTNPIGGFERTEVAEAFNMDPERY
HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHC
VPVMIVSIGKAKNSGYQSYRLPITDVTTFA
CCEEEEEECCCCCCCCCEEECCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Fmn (Potential) [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]