| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226222737
Identifier: 226222737
GI number: 226222737
Start: 108104
End: 108493
Strand: Direct
Name: 226222737
Synonym: Lm4b_00102
Alternate gene names: NA
Gene position: 108104-108493 (Clockwise)
Preceding gene: 226222736
Following gene: 226222738
Centisome position: 3.71
GC content: 38.21
Gene sequence:
>390_bases TTGGTTCAATCGATTAATACAAAGGTAGACTTAACAATAGATGCCACCGCGTATACTGGACTTACAGATTACGGGAAAAT TATGATTGGCGACAAAGGTTTTGAATTTTTTAACTCACGTGATGTGCGTAAATTCGTCCAAATCCCTTGGGAAGAAGTAG ATCAAGTTATCGTATCCGTTATGCTAAAAGGTAAGTGGATCCCTCGCTACGCCATTAAAACAAAGCGCAACGGCACATAC ACATTTGCTTCTAAACGACCTAAAGAAGTTTTACGTAAAATACGAGTTTATGTCGACCCAGCCAATATGGTGAGCTCGCT CAGTTTCTTTGATGTTATGAAGCGCTCGTTTCGGTCGATATTTAGCAAGAAAAAAAACAAAAATAAATAA
Upstream 100 bases:
>100_bases GCAATATTCACCGAGCCTCTTTTCGTTTAGATATATGACACAGATAAACGAATTACGGTATAATAAACAAAACAAGCGAA AAGAAATGGAGCGAATACAG
Downstream 100 bases:
>100_bases GCCGATTTATACCGAAAAGCTTCAATGGATTTATGTCTGTTGATGCTTTTTTTCGTACATAATAATTGAACAAACCACGT ACTTTGTTATAATCTAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTY TFASKRPKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK
Sequences:
>Translated_129_residues MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTY TFASKRPKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK >Mature_129_residues MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTY TFASKRPKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSIFSKKKNKNK
Specific function: Unknown
COG id: COG4687
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15030; Mature: 15030
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSV CCCCCCCEEEEEEECCEECCCCCCCEEEECCCCCCHHCCHHHHHHHCCCHHHHHHHHHHH MLKGKWIPRYAIKTKRNGTYTFASKRPKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSI HHCCCCCCHHHEEECCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FSKKKNKNK HHHHCCCCC >Mature Secondary Structure MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRKFVQIPWEEVDQVIVSV CCCCCCCEEEEEEECCEECCCCCCCEEEECCCCCCHHCCHHHHHHHCCCHHHHHHHHHHH MLKGKWIPRYAIKTKRNGTYTFASKRPKEVLRKIRVYVDPANMVSSLSFFDVMKRSFRSI HHCCCCCCHHHEEECCCCEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH FSKKKNKNK HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA