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The map label for this gene is zntR [C]

Identifier: 226222721

GI number: 226222721

Start: 87436

End: 87804

Strand: Reverse

Name: zntR [C]

Synonym: Lm4b_00086

Alternate gene names: 226222721

Gene position: 87804-87436 (Counterclockwise)

Preceding gene: 226222722

Following gene: 226222718

Centisome position: 3.01

GC content: 39.84

Gene sequence:

>369_bases
ATGGCTTTTTCTATCGGTGAATTTTCCGAACTAGTAGGCATTCCCAGTAGCACCCTTAGATTCTACGAAAAAGAAGGCTT
AATAACCCCTGACCGCGACAAGAATAATTTGCGCATATACAGCGAAGAAGACGCCAATTGGCTAAAATTTTTACTGCACT
TAAAAGGCGCCGGGTTATCGGTAGAAGAATTAAAGCAGTACACAATTTGGCGCGCAGCAGGAGACAGCACTATTTCCGAA
CGATTAAATATGTTAAAAAAGAAAAAGGTTATTTTGGAGCAAGAGATTGAAGACTTGCAGAAGAATTTGGATACAGTGGT
TAGGAAGATTGGGATTTATGAAGAGAAGGTTAAGACTAGACGAGTTTAG

Upstream 100 bases:

>100_bases
GGTGATAGATACTCAGCAGCTGAAAATAAACGCATCGGAAAGTAGGCATTTCCTATTCAAAATGGTATCCTTATGAAAAA
CACACAGAAGAGGTGATTAA

Downstream 100 bases:

>100_bases
CTAGGTGAATTTTTCTCGTGTACAGTAAGAGACCATTTACAACAGCATATAGAAAAAGACAACCTGTTATGGGTTGTCTT
TTTTGACGTTCTTTTTATCG

Product: transcription regulator merR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MAFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRIYSEEDANWLKFLLHLKGAGLSVEELKQYTIWRAAGDSTISE
RLNMLKKKKVILEQEIEDLQKNLDTVVRKIGIYEEKVKTRRV

Sequences:

>Translated_122_residues
MAFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRIYSEEDANWLKFLLHLKGAGLSVEELKQYTIWRAAGDSTISE
RLNMLKKKKVILEQEIEDLQKNLDTVVRKIGIYEEKVKTRRV
>Mature_121_residues
AFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRIYSEEDANWLKFLLHLKGAGLSVEELKQYTIWRAAGDSTISER
LNMLKKKKVILEQEIEDLQKNLDTVVRKIGIYEEKVKTRRV

Specific function: Zinc-Responsive Transcriptional Regulator Of Znta. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 14176; Mature: 14044

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRIYSEEDANWLKFLLHLKGAGLS
CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCC
VEELKQYTIWRAAGDSTISERLNMLKKKKVILEQEIEDLQKNLDTVVRKIGIYEEKVKTR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
RV
CC
>Mature Secondary Structure 
AFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRIYSEEDANWLKFLLHLKGAGLS
CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCC
VEELKQYTIWRAAGDSTISERLNMLKKKKVILEQEIEDLQKNLDTVVRKIGIYEEKVKTR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
RV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]