Click here to switch to the map view.

The map label for this gene is yisX [H]

Identifier: 226222718

GI number: 226222718

Start: 84769

End: 85407

Strand: Reverse

Name: yisX [H]

Synonym: Lm4b_00083

Alternate gene names: 226222718

Gene position: 85407-84769 (Counterclockwise)

Preceding gene: 226222721

Following gene: 226222676

Centisome position: 2.93

GC content: 38.03

Gene sequence:

>639_bases
ATGAAAAAAATTACTGCGCCGCGGATTCCTGATGAGGATTTGACGGTTTATCCGAATGATACATATTTTATTGAAGATAT
TGGAGAAGTTAGTGAGCAAATCTTTAGAAAAACAACGCTAACTGGGGAAATTTTCGAGCATTTTCATTTAGAAACGATTA
TTTTTGATGGGTGTGTGTTCGATTCTGTTTCTCTTGTAAGCGCGAATTTGACTGATGTTGTATTTAAAAATTGTGATTTG
TCGAATTTAGATTTAATGGGCGCAATTATTCACCGAGTTCGTTTTGAAAATTGTAAATTAATTGGCGTGAATTTTAGCGA
TGCTACGCTTAGAAATTGCGTTTTTGTTGATTGTTATGCGGATTATGTTGCCTTTCGTTATGCTAACTTGAAATGGGTGG
CGTTTGAGGCGGGCGCGTATACGAATAGTGATTTTAGCGGGGCTCAACTGGTCGATACCTATTTGGAACGGCTTGATTTG
AATAAAGCGCAGTTTTTAAATTGCGCGCTAAATGGTGTTGATCTTAGCTCATGTATTTTTGAGTCTATCACTGCAATGCC
GCAAGATTTGAAGGGCGTGAGCATTGATTTTTCGCATGCTCCTGCTTTGATGCCGTTGTTTGGAATACGGGTTAAATAA

Upstream 100 bases:

>100_bases
CTACATTCATTGTAATCCGTTTTTTATGAAAGGTAAACGATTTTCCGCTCCTTTTCCTAGCAAAATACGGTATAATGAAA
GCGGAAGTGAGGTCGATATA

Downstream 100 bases:

>100_bases
TTGAAAAAAGATGGTTCCGCGTTACCTTGGAACCATCTTTTCATGTTTAATTAGCCATTCTTTGCGCGCAAGACCGCCAC
CGTAGCCTCCTAATGCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKITAPRIPDEDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEIFEHFHLETIIFDGCVFDSVSLVSANLTDVVFKNCDL
SNLDLMGAIIHRVRFENCKLIGVNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDL
NKAQFLNCALNGVDLSSCIFESITAMPQDLKGVSIDFSHAPALMPLFGIRVK

Sequences:

>Translated_212_residues
MKKITAPRIPDEDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEIFEHFHLETIIFDGCVFDSVSLVSANLTDVVFKNCDL
SNLDLMGAIIHRVRFENCKLIGVNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDL
NKAQFLNCALNGVDLSSCIFESITAMPQDLKGVSIDFSHAPALMPLFGIRVK
>Mature_212_residues
MKKITAPRIPDEDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEIFEHFHLETIIFDGCVFDSVSLVSANLTDVVFKNCDL
SNLDLMGAIIHRVRFENCKLIGVNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDL
NKAQFLNCALNGVDLSSCIFESITAMPQDLKGVSIDFSHAPALMPLFGIRVK

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646
- InterPro:   IPR012334 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 23815; Mature: 23815

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITAPRIPDEDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEIFEHFHLETIIFDGCVF
CCCCCCCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCHHH
DSVSLVSANLTDVVFKNCDLSNLDLMGAIIHRVRFENCKLIGVNFSDATLRNCVFVDCYA
CCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHEEEEEHHH
DYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDLNKAQFLNCALNGVDLSSCIF
HHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH
ESITAMPQDLKGVSIDFSHAPALMPLFGIRVK
HHHHCCCCCCCCCEEECCCCCCHHHHCCCCCC
>Mature Secondary Structure
MKKITAPRIPDEDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEIFEHFHLETIIFDGCVF
CCCCCCCCCCCCCCEECCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCHHH
DSVSLVSANLTDVVFKNCDLSNLDLMGAIIHRVRFENCKLIGVNFSDATLRNCVFVDCYA
CCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHEEEEEHHH
DYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDLNKAQFLNCALNGVDLSSCIF
HHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHH
ESITAMPQDLKGVSIDFSHAPALMPLFGIRVK
HHHHCCCCCCCCCEEECCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]