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The map label for this gene is yidA [H]

Identifier: 226222675

GI number: 226222675

Start: 38751

End: 39560

Strand: Reverse

Name: yidA [H]

Synonym: Lm4b_00039

Alternate gene names: 226222675

Gene position: 39560-38751 (Counterclockwise)

Preceding gene: 226222676

Following gene: 226222673

Centisome position: 1.36

GC content: 36.42

Gene sequence:

>810_bases
TTGGAAAAATACTTAATTTGTTCTGATTTAGACGGGACATTACTACTTAAAAACCAAACTATCTCACCAAAAACGTTAAA
TTTATTGCAACAATTAATAGAAGAAGGTCATCATTTTGCCGTTTCTACCGGTCGAATGTATAATTCCGCAACAGACTTCG
CCAACCTCGTTCATCCAAAAGCAGATGTCATTGCTTCAAACGGCGGTGTAGTTGCAGTATCAGGCGAAATTATCCTACAA
GAAAAAATGAAACAATCTGCGTTACTCGAGACATTTTTATTGTGCCAAAATCATGATTTACCTGTGTTTTTCTTTTCAAC
AGATACTGTTTACTACACTAAAAATCCCCCATATTATTTTACGGATGAAGAAGATAAAGGCCGCGTAAATGCTACAAAAC
TCGTTCCTATCAAAACAAAAGAAAGCTTCCTTGAGCATGCGGACCAGTTCATTAATGGGATTGTAATCGAGGAAGAAGAT
TTCGACAAACTCGCAGCCCTTCGAAGTGAGCTAGAAAAACTATCCGATGTTTCTATCCTTTCTTCCCATGCCAATAATAT
CGAGATCTTACCAAAAGATATGGATAAAAAATACGCCGTGAAAAATCTCGCTGCACATTTAAATATCAAGCCAGAAAATG
TAATTACTTTTGGTGATGGTGAAAATGATATTGGGATGCTTGAAGTTGCTGGCGCAGGGGTTGCGATGGAAAATGCAAGT
GAACTAGTGAAAAAAAGTGCTGATTTTGTTACTACTGCAAATGATGCCGATGGAATTTACTACTTTTTGAAAAAATATCT
TAATCGTTAA

Upstream 100 bases:

>100_bases
GCAATTAACGGTCAAGTCGAGCCAATGATTATCAACCATAATCCAGAACTAATTATCCGCGAATCTTGCGGCTCTAAGCT
ATAACGAAAGGAAGGTCCAC

Downstream 100 bases:

>100_bases
TAAAAAAAGCTGCCCACGCGGACAGCTTTTTTTCATTTATTCTTCTACGGAAGCAGCTTCTTCATAGTTAATTAATGCAA
TTAATCCGCCAACAGCAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFANLVHPKADVIASNGGVVAVSGEIILQ
EKMKQSALLETFLLCQNHDLPVFFFSTDTVYYTKNPPYYFTDEEDKGRVNATKLVPIKTKESFLEHADQFINGIVIEEED
FDKLAALRSELEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENAS
ELVKKSADFVTTANDADGIYYFLKKYLNR

Sequences:

>Translated_269_residues
MEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFANLVHPKADVIASNGGVVAVSGEIILQ
EKMKQSALLETFLLCQNHDLPVFFFSTDTVYYTKNPPYYFTDEEDKGRVNATKLVPIKTKESFLEHADQFINGIVIEEED
FDKLAALRSELEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENAS
ELVKKSADFVTTANDADGIYYFLKKYLNR
>Mature_269_residues
MEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFANLVHPKADVIASNGGVVAVSGEIILQ
EKMKQSALLETFLLCQNHDLPVFFFSTDTVYYTKNPPYYFTDEEDKGRVNATKLVPIKTKESFLEHADQFINGIVIEEED
FDKLAALRSELEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENAS
ELVKKSADFVTTANDADGIYYFLKKYLNR

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=270, Percent_Identity=34.0740740740741, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1786982, Length=272, Percent_Identity=25, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87081790, Length=281, Percent_Identity=27.4021352313167, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787043, Length=262, Percent_Identity=24.0458015267176, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29962; Mature: 29962

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFANLVHPK
CCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCC
ADVIASNGGVVAVSGEIILQEKMKQSALLETFLLCQNHDLPVFFFSTDTVYYTKNPPYYF
HHEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCEEE
TDEEDKGRVNATKLVPIKTKESFLEHADQFINGIVIEEEDFDKLAALRSELEKLSDVSIL
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHH
SSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENAS
HCCCCCEEEECCCCCHHHHHHHHHHHEEECCCCEEEECCCCCCCEEEEECCCCEEHHHHH
ELVKKSADFVTTANDADGIYYFLKKYLNR
HHHHCCCCEEEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFANLVHPK
CCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCC
ADVIASNGGVVAVSGEIILQEKMKQSALLETFLLCQNHDLPVFFFSTDTVYYTKNPPYYF
HHEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEECCCCCEEE
TDEEDKGRVNATKLVPIKTKESFLEHADQFINGIVIEEEDFDKLAALRSELEKLSDVSIL
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHH
SSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENAS
HCCCCCEEEECCCCCHHHHHHHHHHHEEECCCCEEEECCCCCCCEEEEECCCCEEHHHHH
ELVKKSADFVTTANDADGIYYFLKKYLNR
HHHHCCCCEEEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]