Click here to switch to the map view.

The map label for this gene is dpnD

Identifier: 225861643

GI number: 225861643

Start: 1680467

End: 1680928

Strand: Reverse

Name: dpnD

Synonym: SPT_1766

Alternate gene names: 225861643

Gene position: 1680928-1680467 (Counterclockwise)

Preceding gene: 225861644

Following gene: 225861639

Centisome position: 79.58

GC content: 34.63

Gene sequence:

>462_bases
ATGAAAACGAAACAACTTGTTGCATCAGAAGAGGTGTATGATTTCTTAAAAGTCATCTGGCCTGATTATGAAACTGAAAG
CCGTTACGATAACCTAAGTTTAATCGTCTGTACCTTATCAGATCCCGATTGTGTGAGATGGTTATCTGAAAATATGAAAT
TTGGTGACGAAAAACAACTAGCTTTGATGAAGGAAAAATATGGGTGGGAAGTAGGAGATAAATTGCCAGAGTGGCTACAT
AGCTCCTATCATAGATTATTGTTAATAGGTGAATTATTGGAAAGCAATCTAAAACTGAAAAAGTATACAGTAGAAATTAC
AGAAACTTTATCACGTTTAGTAAGTATAGAGGCTGAAAATCCAGATGAAGCCGAACGACTTGTAAGAGAAAAGTATAAGA
GTTGTGAAATTGTTCTTGATGCAGATGATTTTCAGGACTATGACACTAGCATATATGAATAG

Upstream 100 bases:

>100_bases
TTAAGAACAATCATATCAAAGAAAAGATTAGGCAACAGCTTCAAATATTAAGAGACAAAGAAATAATAGAATTTAAAGGT
AGAGGAAAGTATCGGAAATT

Downstream 100 bases:

>100_bases
GTAGATGTTTTTATTTTGTCACACAAAAAAGAGGCTCGCACCTCTTTTTCTTATTTCTTTTTATGATTTAATACGGCATT
GAGGACAATGGCGAGTAGGC

Product: protein DpnD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKTKQLVASEEVYDFLKVIWPDYETESRYDNLSLIVCTLSDPDCVRWLSENMKFGDEKQLALMKEKYGWEVGDKLPEWLH
SSYHRLLLIGELLESNLKLKKYTVEITETLSRLVSIEAENPDEAERLVREKYKSCEIVLDADDFQDYDTSIYE

Sequences:

>Translated_153_residues
MKTKQLVASEEVYDFLKVIWPDYETESRYDNLSLIVCTLSDPDCVRWLSENMKFGDEKQLALMKEKYGWEVGDKLPEWLH
SSYHRLLLIGELLESNLKLKKYTVEITETLSRLVSIEAENPDEAERLVREKYKSCEIVLDADDFQDYDTSIYE
>Mature_153_residues
MKTKQLVASEEVYDFLKVIWPDYETESRYDNLSLIVCTLSDPDCVRWLSENMKFGDEKQLALMKEKYGWEVGDKLPEWLH
SSYHRLLLIGELLESNLKLKKYTVEITETLSRLVSIEAENPDEAERLVREKYKSCEIVLDADDFQDYDTSIYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DPND_STRPN (P0A3T4)

Other databases:

- EMBL:   M14340
- EMBL:   AE005672
- PIR:   D24372
- PIR:   H95215
- RefSeq:   NP_346281.1
- EnsemblBacteria:   EBSTRT00000027104
- GeneID:   930973
- GenomeReviews:   AE005672_GR
- KEGG:   spn:SP_1849
- TIGR:   SP_1849
- GeneTree:   EBGT00050000030021
- HOGENOM:   HBG219180
- ProtClustDB:   CLSK803874
- BioCyc:   SPNE170187-1:SP_1849-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18058; Mature: 18058

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKQLVASEEVYDFLKVIWPDYETESRYDNLSLIVCTLSDPDCVRWLSENMKFGDEKQL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHH
ALMKEKYGWEVGDKLPEWLHSSYHRLLLIGELLESNLKLKKYTVEITETLSRLVSIEAEN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDEAERLVREKYKSCEIVLDADDFQDYDTSIYE
CHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCC
>Mature Secondary Structure
MKTKQLVASEEVYDFLKVIWPDYETESRYDNLSLIVCTLSDPDCVRWLSENMKFGDEKQL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHH
ALMKEKYGWEVGDKLPEWLHSSYHRLLLIGELLESNLKLKKYTVEITETLSRLVSIEAEN
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
PDEAERLVREKYKSCEIVLDADDFQDYDTSIYE
CHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3019562; 11463916