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The map label for this gene is yfbE [C]

Identifier: 225861633

GI number: 225861633

Start: 1669604

End: 1670830

Strand: Reverse

Name: yfbE [C]

Synonym: SPT_1754

Alternate gene names: 225861633

Gene position: 1670830-1669604 (Counterclockwise)

Preceding gene: 225861634

Following gene: 225861632

Centisome position: 79.11

GC content: 43.85

Gene sequence:

>1227_bases
ATGCCAAATTACAATATTCCATTTTCACCACCCGATATTACAGAAGCAGAAATTGCTGAAGTAGCGGATACCCTTCGTTC
TGGTTGGATCACAACCGGTCCTAAGACAAAAGAATTGGAGCGTCGCTTGTCTCAATACACACAGACACCCAAGACTGTCT
GCCTAAACTCTGCGACTGCCGCTCTTGAGTTGATTTTGCGCGTCTTGGAAGTGGGGCCTGGTGATGAAGTCGTCGTTCCA
GCTATGACCTATACAGCTTCATGTAGTGTCATCACTCACGTAGGAGCAACACCTGTCATGGTGGATATCCAAGCAGATAC
GTTTGAGATGGATTATGACTTGCTGGAGCAAGCTATCACTGAAAAGACCAAGGTAATCATTCCAGTAGAACTTGCAGGGA
TTGTTTGCGACTATGACCGTTTGTTCCAAGTAGTGGAGAAGAAACGTGACCTCTTTACTGCTTCAAGCAAGTGGCAAAAA
GCCTTTAACCGTATCGTGATTGTTTCTGATAGTGCCCATGCTTTGGGATCTACTTATAAAGGACAACCAGCTGGTTCTAT
CGCTGACTTTACTTCCTTCTCATTCCATGCCGTTAAGAACTTTACAACAGCAGAAGGTGGAAGTGCGACTTGGAAAGCCA
ATCCAGCGATTGACGACGAAGAGATGTACAAAGAATTCCAAATTCTTTCCCTTCACGGGCAAACTAAGGATGCTCTTGCT
AAGATGCAACTGGGTTCATGGGAATACGATATCGTCACACCAGCCTACAAGTGCAATATGATCGATATCATGGCTTCGCT
TGGTTTGGTGCAATTGGACCGTTACTCTGGTTTGTTGCAACGTCGTAAGGACATTGTGGACCGCTATGATCGTGGTTTTG
CAGGTTCTCGCATCCATCCTTTAGCACACAAGACTGAAACTGTCGAATCTTCACGTCACCTCTACATTACCCATGTAGAA
GGAGCAAGCTTAGAAGAACGCAATCTTATCATCCAAGAATTGGCCAAGGCAGGAATTGCAAGTAACGTACACTACAAACC
GCTTCCGCTCTTGACAGCCTATAAGAATCTTGGTTTTGACATGGCGAACTATCCTAAGGCCTATGCCTTCTTTGAAAATG
AAATTACCCTTCCTCTTCACACTAAATTAAGTGATGAAGAAGTGGACTATATCATTGAGACTTTCAAAACAGTTTCTGAA
AAAGTGCTAACTTCATCAAAAAAATGA

Upstream 100 bases:

>100_bases
TAGTTTCCTTGGAGACATCAAAATCATGTTTCAAACCGTGTTTGAAGTGCTAAAATAAAGTAGTCATGAGAAAATGAGTA
CAGATAAAAGGAGCAAATCA

Downstream 100 bases:

>100_bases
CAAACTACAGTCAAGTAATAGTGATTCTGTTTCTAAAAAGTCTAATTGAGTGTAAAACTGTTGTTTTCAATTGAAAGTCC
TATAGTAAAATGAAATAAAA

Product: Cps7G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MPNYNIPFSPPDITEAEIAEVADTLRSGWITTGPKTKELERRLSQYTQTPKTVCLNSATAALELILRVLEVGPGDEVVVP
AMTYTASCSVITHVGATPVMVDIQADTFEMDYDLLEQAITEKTKVIIPVELAGIVCDYDRLFQVVEKKRDLFTASSKWQK
AFNRIVIVSDSAHALGSTYKGQPAGSIADFTSFSFHAVKNFTTAEGGSATWKANPAIDDEEMYKEFQILSLHGQTKDALA
KMQLGSWEYDIVTPAYKCNMIDIMASLGLVQLDRYSGLLQRRKDIVDRYDRGFAGSRIHPLAHKTETVESSRHLYITHVE
GASLEERNLIIQELAKAGIASNVHYKPLPLLTAYKNLGFDMANYPKAYAFFENEITLPLHTKLSDEEVDYIIETFKTVSE
KVLTSSKK

Sequences:

>Translated_408_residues
MPNYNIPFSPPDITEAEIAEVADTLRSGWITTGPKTKELERRLSQYTQTPKTVCLNSATAALELILRVLEVGPGDEVVVP
AMTYTASCSVITHVGATPVMVDIQADTFEMDYDLLEQAITEKTKVIIPVELAGIVCDYDRLFQVVEKKRDLFTASSKWQK
AFNRIVIVSDSAHALGSTYKGQPAGSIADFTSFSFHAVKNFTTAEGGSATWKANPAIDDEEMYKEFQILSLHGQTKDALA
KMQLGSWEYDIVTPAYKCNMIDIMASLGLVQLDRYSGLLQRRKDIVDRYDRGFAGSRIHPLAHKTETVESSRHLYITHVE
GASLEERNLIIQELAKAGIASNVHYKPLPLLTAYKNLGFDMANYPKAYAFFENEITLPLHTKLSDEEVDYIIETFKTVSE
KVLTSSKK
>Mature_407_residues
PNYNIPFSPPDITEAEIAEVADTLRSGWITTGPKTKELERRLSQYTQTPKTVCLNSATAALELILRVLEVGPGDEVVVPA
MTYTASCSVITHVGATPVMVDIQADTFEMDYDLLEQAITEKTKVIIPVELAGIVCDYDRLFQVVEKKRDLFTASSKWQKA
FNRIVIVSDSAHALGSTYKGQPAGSIADFTSFSFHAVKNFTTAEGGSATWKANPAIDDEEMYKEFQILSLHGQTKDALAK
MQLGSWEYDIVTPAYKCNMIDIMASLGLVQLDRYSGLLQRRKDIVDRYDRGFAGSRIHPLAHKTETVESSRHLYITHVEG
ASLEERNLIIQELAKAGIASNVHYKPLPLLTAYKNLGFDMANYPKAYAFFENEITLPLHTKLSDEEVDYIIETFKTVSEK
VLTSSKK

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=396, Percent_Identity=32.0707070707071, Blast_Score=207, Evalue=7e-55,
Organism=Escherichia coli, GI2367285, Length=358, Percent_Identity=28.7709497206704, Blast_Score=148, Evalue=5e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 45495; Mature: 45364

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNYNIPFSPPDITEAEIAEVADTLRSGWITTGPKTKELERRLSQYTQTPKTVCLNSATA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHEECCCHHH
ALELILRVLEVGPGDEVVVPAMTYTASCSVITHVGATPVMVDIQADTFEMDYDLLEQAIT
HHHHHHHHHHCCCCCCEEEEEEEEECCCHHHEECCCCCEEEEEECCCEECCHHHHHHHHH
EKTKVIIPVELAGIVCDYDRLFQVVEKKRDLFTASSKWQKAFNRIVIVSDSAHALGSTYK
CCCEEEEEEEHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHCCCCC
GQPAGSIADFTSFSFHAVKNFTTAEGGSATWKANPAIDDEEMYKEFQILSLHGQTKDALA
CCCCCCHHHHCCCHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHEEEEECCCCHHHHH
KMQLGSWEYDIVTPAYKCNMIDIMASLGLVQLDRYSGLLQRRKDIVDRYDRGFAGSRIHP
HHHCCCCCEEEECCCHHCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LAHKTETVESSRHLYITHVEGASLEERNLIIQELAKAGIASNVHYKPLPLLTAYKNLGFD
CHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
MANYPKAYAFFENEITLPLHTKLSDEEVDYIIETFKTVSEKVLTSSKK
CCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PNYNIPFSPPDITEAEIAEVADTLRSGWITTGPKTKELERRLSQYTQTPKTVCLNSATA
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHEECCCHHH
ALELILRVLEVGPGDEVVVPAMTYTASCSVITHVGATPVMVDIQADTFEMDYDLLEQAIT
HHHHHHHHHHCCCCCCEEEEEEEEECCCHHHEECCCCCEEEEEECCCEECCHHHHHHHHH
EKTKVIIPVELAGIVCDYDRLFQVVEKKRDLFTASSKWQKAFNRIVIVSDSAHALGSTYK
CCCEEEEEEEHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHCCCCC
GQPAGSIADFTSFSFHAVKNFTTAEGGSATWKANPAIDDEEMYKEFQILSLHGQTKDALA
CCCCCCHHHHCCCHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHEEEEECCCCHHHHH
KMQLGSWEYDIVTPAYKCNMIDIMASLGLVQLDRYSGLLQRRKDIVDRYDRGFAGSRIHP
HHHCCCCCEEEECCCHHCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCC
LAHKTETVESSRHLYITHVEGASLEERNLIIQELAKAGIASNVHYKPLPLLTAYKNLGFD
CHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
MANYPKAYAFFENEITLPLHTKLSDEEVDYIIETFKTVSEKVLTSSKK
CCCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]